Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 Y_RNA.230-201ENST00000364348 109 ntBASIC1.65□□□□□ -2.15
PDX1P52945 SNORA4.2-201ENST00000365313 147 ntBASIC1.65□□□□□ -2.15
PDX1P52945 Y_RNA.439-201ENST00000384119 94 ntBASIC1.65□□□□□ -2.15
PDX1P52945 MIR515-2-201ENST00000384883 83 ntBASIC1.65□□□□□ -2.15
PDX1P52945 MIR515-1-201ENST00000384884 83 ntBASIC1.65□□□□□ -2.15
PDX1P52945 RNA5SP109-201ENST00000391010 116 ntBASIC1.65□□□□□ -2.15
PDX1P52945 RNA5SP323-201ENST00000391094 133 ntBASIC1.65□□□□□ -2.15
PDX1P52945 MIR873-201ENST00000401120 77 ntBASIC1.65□□□□□ -2.15
PDX1P52945 AL031003.1-201ENST00000404229 172 ntBASIC1.65□□□□□ -2.15
PDX1P52945 RNU4-30P-201ENST00000410245 143 ntBASIC1.65□□□□□ -2.15
PDX1P52945 EBAG9P1-201ENST00000418955 543 ntBASIC1.65□□□□□ -2.15
PDX1P52945 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.65□□□□□ -2.15
PDX1P52945 RPL23AP6-201ENST00000446637 472 ntBASIC1.65□□□□□ -2.15
PDX1P52945 RPS27P1-201ENST00000450552 247 ntBASIC1.65□□□□□ -2.15
PDX1P52945 U8.20-201ENST00000459445 131 ntBASIC1.65□□□□□ -2.15
PDX1P52945 RNA5SP20-201ENST00000515976 84 ntBASIC1.65□□□□□ -2.15
PDX1P52945 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
PDX1P52945 MIR4713-201ENST00000582691 75 ntBASIC1.65□□□□□ -2.15
PDX1P52945 AC005034.5-201ENST00000604219 466 ntBASIC1.65□□□□□ -2.15
PDX1P52945 AC022441.3-201ENST00000605737 136 ntBASIC1.65□□□□□ -2.15
PDX1P52945 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
PDX1P52945 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
PDX1P52945 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
PDX1P52945 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
PDX1P52945 Y_RNA.105-201ENST00000363182 111 ntBASIC1.64□□□□□ -2.15
PDX1P52945 Y_RNA.202-201ENST00000364083 110 ntBASIC1.64□□□□□ -2.15
PDX1P52945 MIR520A-201ENST00000384862 85 ntBASIC1.64□□□□□ -2.15
PDX1P52945 RNA5SP212-201ENST00000391223 107 ntBASIC1.64□□□□□ -2.15
PDX1P52945 MIR1287-201ENST00000408492 90 ntBASIC1.64□□□□□ -2.15
PDX1P52945 RNU6-101P-201ENST00000410323 104 ntBASIC1.64□□□□□ -2.15
PDX1P52945 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.64□□□□□ -2.15
PDX1P52945 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.64□□□□□ -2.15
PDX1P52945 RPS26P55-201ENST00000471178 356 ntBASIC1.64□□□□□ -2.15
PDX1P52945 AC005840.1-201ENST00000498412 377 ntBASIC1.64□□□□□ -2.15
PDX1P52945 MRPS17P9-201ENST00000511924 393 ntBASIC1.64□□□□□ -2.15
PDX1P52945 AC024995.1-201ENST00000523014 93 ntBASIC1.64□□□□□ -2.15
PDX1P52945 CBX3P4-201ENST00000538909 354 ntBASIC1.64□□□□□ -2.15
PDX1P52945 DNAJC19P9-201ENST00000555084 351 ntBASIC1.64□□□□□ -2.15
PDX1P52945 AC113195.1-201ENST00000579952 141 ntBASIC1.64□□□□□ -2.15
PDX1P52945 AC073413.2-201ENST00000604332 360 ntBASIC1.64□□□□□ -2.15
PDX1P52945 AC022217.4-201ENST00000604389 163 ntBASIC1.64□□□□□ -2.15
PDX1P52945 MIR502-201ENST00000606349 86 ntBASIC1.64□□□□□ -2.15
PDX1P52945 AC103810.8-201ENST00000607347 118 ntBASIC1.64□□□□□ -2.15
PDX1P52945 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.64□□□□□ -2.15
PDX1P52945 Y_RNA.153-201ENST00000363615 91 ntBASIC1.63□□□□□ -2.15
PDX1P52945 SNORD48-201ENST00000364953 64 ntBASIC1.63□□□□□ -2.15
PDX1P52945 Y_RNA.326-201ENST00000365176 113 ntBASIC1.63□□□□□ -2.15
PDX1P52945 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.63□□□□□ -2.15
PDX1P52945 Y_RNA.455-201ENST00000384230 98 ntBASIC1.63□□□□□ -2.15
PDX1P52945 Y_RNA.551-201ENST00000384661 102 ntBASIC1.63□□□□□ -2.15
PDX1P52945 MIR1252-201ENST00000408861 65 ntBASIC1.63□□□□□ -2.15
PDX1P52945 HSPE1P9-201ENST00000440046 311 ntBASIC1.63□□□□□ -2.15
PDX1P52945 AC073910.1-201ENST00000445047 438 ntBASIC1.63□□□□□ -2.15
PDX1P52945 RNU7-95P-201ENST00000459222 64 ntBASIC1.63□□□□□ -2.15
PDX1P52945 RNU1-142P-201ENST00000516682 145 ntBASIC1.63□□□□□ -2.15
PDX1P52945 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.63□□□□□ -2.15
PDX1P52945 MIR3684-201ENST00000579779 74 ntBASIC1.63□□□□□ -2.15
PDX1P52945 MIR3618-201ENST00000580330 88 ntBASIC1.63□□□□□ -2.15
PDX1P52945 MIR8070-201ENST00000616510 88 ntBASIC1.63□□□□□ -2.15
PDX1P52945 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
PDX1P52945 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
PDX1P52945 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
PDX1P52945 SNORD81.1-201ENST00000363064 77 ntBASIC1.62□□□□□ -2.15
PDX1P52945 Y_RNA.286-201ENST00000364813 102 ntBASIC1.62□□□□□ -2.15
PDX1P52945 RNU6-117P-201ENST00000365415 107 ntBASIC1.62□□□□□ -2.15
PDX1P52945 SNORA63.7-201ENST00000365579 123 ntBASIC1.62□□□□□ -2.15
PDX1P52945 RNU6-505P-201ENST00000384427 107 ntBASIC1.62□□□□□ -2.15
PDX1P52945 AC113618.1-201ENST00000416747 285 ntBASIC1.62□□□□□ -2.15
PDX1P52945 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.62□□□□□ -2.15
PDX1P52945 HMGB3P17-201ENST00000504195 649 ntBASIC1.62□□□□□ -2.15
PDX1P52945 RNU6-436P-201ENST00000516171 114 ntBASIC1.62□□□□□ -2.15
PDX1P52945 RNU7-99P-201ENST00000516271 62 ntBASIC1.62□□□□□ -2.15
PDX1P52945 RNU6-63P-201ENST00000516690 95 ntBASIC1.62□□□□□ -2.15
PDX1P52945 RNU7-172P-201ENST00000517125 64 ntBASIC1.62□□□□□ -2.15
PDX1P52945 RNU6-897P-201ENST00000517135 105 ntBASIC1.62□□□□□ -2.15
PDX1P52945 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.62□□□□□ -2.15
PDX1P52945 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.62□□□□□ -2.15
PDX1P52945 AC024614.2-201ENST00000577584 372 ntBASIC1.62□□□□□ -2.15
PDX1P52945 MIR4300-201ENST00000581016 96 ntBASIC1.62□□□□□ -2.15
PDX1P52945 AC006380.1-201ENST00000603598 186 ntBASIC1.62□□□□□ -2.15
PDX1P52945 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.62□□□□□ -2.15
PDX1P52945 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.62□□□□□ -2.15
PDX1P52945 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
PDX1P52945 Y_RNA.26-201ENST00000362539 101 ntBASIC1.61□□□□□ -2.15
PDX1P52945 RNU6-271P-201ENST00000363858 105 ntBASIC1.61□□□□□ -2.15
PDX1P52945 RNU6-324P-201ENST00000363957 106 ntBASIC1.61□□□□□ -2.15
PDX1P52945 Y_RNA.331-201ENST00000365267 102 ntBASIC1.61□□□□□ -2.15
PDX1P52945 AC117470.1-201ENST00000381974 330 ntBASIC1.61□□□□□ -2.15
PDX1P52945 Y_RNA.462-201ENST00000384268 102 ntBASIC1.61□□□□□ -2.15
PDX1P52945 RNU6-102P-201ENST00000384485 104 ntBASIC1.61□□□□□ -2.15
PDX1P52945 RNU6-121P-201ENST00000410525 99 ntBASIC1.61□□□□□ -2.15
PDX1P52945 RNU2-7P-201ENST00000410794 178 ntBASIC1.61□□□□□ -2.15
PDX1P52945 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.61□□□□□ -2.15
PDX1P52945 RNU7-110P-201ENST00000516891 62 ntBASIC1.61□□□□□ -2.15
PDX1P52945 Y_RNA.721-201ENST00000517207 102 ntBASIC1.61□□□□□ -2.15
PDX1P52945 AC131281.1-201ENST00000522984 164 ntBASIC1.61□□□□□ -2.15
PDX1P52945 RNY1P10-201ENST00000363268 113 ntBASIC1.6□□□□□ -2.15
PDX1P52945 Y_RNA.172-201ENST00000363765 102 ntBASIC1.6□□□□□ -2.15
PDX1P52945 Y_RNA.210-201ENST00000364161 110 ntBASIC1.6□□□□□ -2.15
PDX1P52945 RNU6-806P-201ENST00000365147 105 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms