Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AL050343.2-201ENST00000607338 280 ntBASIC1.22□□□□□ -2.21
SMSP52788 7SK.8-201ENST00000612110 250 ntBASIC1.22□□□□□ -2.21
SMSP52788 7SK.11-201ENST00000615477 250 ntBASIC1.22□□□□□ -2.21
SMSP52788 7SK.13-201ENST00000622040 250 ntBASIC1.22□□□□□ -2.21
SMSP52788 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
SMSP52788 RNU6-1188P-201ENST00000363795 107 ntBASIC1.21□□□□□ -2.22
SMSP52788 RNU4-76P-201ENST00000364509 141 ntBASIC1.21□□□□□ -2.22
SMSP52788 RNU6-407P-201ENST00000365280 104 ntBASIC1.21□□□□□ -2.22
SMSP52788 RNU6-424P-201ENST00000384367 105 ntBASIC1.21□□□□□ -2.22
SMSP52788 RNU6-505P-201ENST00000384427 107 ntBASIC1.21□□□□□ -2.22
SMSP52788 MIR625-201ENST00000385047 85 ntBASIC1.21□□□□□ -2.22
SMSP52788 SNORD12B-201ENST00000410433 91 ntBASIC1.21□□□□□ -2.22
SMSP52788 AC015922.2-201ENST00000435593 184 ntBASIC1.21□□□□□ -2.22
SMSP52788 AC091021.1-201ENST00000468051 388 ntBASIC1.21□□□□□ -2.22
SMSP52788 OR9P1P-201ENST00000496431 281 ntBASIC1.21□□□□□ -2.22
SMSP52788 AP003033.1-201ENST00000527244 415 ntBASIC1.21□□□□□ -2.22
SMSP52788 AC011604.1-201ENST00000545978 196 ntBASIC1.21□□□□□ -2.22
SMSP52788 MIR1244-1-201ENST00000612829 85 ntBASIC1.21□□□□□ -2.22
SMSP52788 AC087588.2-201ENST00000617667 426 ntBASIC1.21□□□□□ -2.22
SMSP52788 AC127459.3-201ENST00000624328 466 ntBASIC1.21□□□□□ -2.22
SMSP52788 MIR1244-3-201ENST00000635744 85 ntBASIC1.21□□□□□ -2.22
SMSP52788 MIR1244-2-201ENST00000636449 85 ntBASIC1.21□□□□□ -2.22
SMSP52788 MIR1244-4-202ENST00000636813 85 ntBASIC1.21□□□□□ -2.22
SMSP52788 RNA5SP327-201ENST00000362494 101 ntBASIC1.2□□□□□ -2.22
SMSP52788 SNORD114-22-201ENST00000365423 72 ntBASIC1.2□□□□□ -2.22
SMSP52788 MIR520G-201ENST00000385064 90 ntBASIC1.2□□□□□ -2.22
SMSP52788 SNORA69.1-201ENST00000390904 137 ntBASIC1.2□□□□□ -2.22
SMSP52788 RNA5SP482-201ENST00000391269 118 ntBASIC1.2□□□□□ -2.22
SMSP52788 Y_RNA.592-201ENST00000410274 109 ntBASIC1.2□□□□□ -2.22
SMSP52788 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.2□□□□□ -2.22
SMSP52788 AC092991.1-201ENST00000477176 376 ntBASIC1.2□□□□□ -2.22
SMSP52788 RNA5SP168-201ENST00000516642 112 ntBASIC1.2□□□□□ -2.22
SMSP52788 RNU6-264P-201ENST00000517134 104 ntBASIC1.2□□□□□ -2.22
SMSP52788 RNU6-165P-201ENST00000517170 99 ntBASIC1.2□□□□□ -2.22
SMSP52788 AC068338.1-201ENST00000565567 176 ntBASIC1.2□□□□□ -2.22
SMSP52788 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.2□□□□□ -2.22
SMSP52788 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
SMSP52788 RNU6-199P-201ENST00000362954 107 ntBASIC1.19□□□□□ -2.22
SMSP52788 Y_RNA.265-201ENST00000364677 108 ntBASIC1.19□□□□□ -2.22
SMSP52788 RNU6-53P-201ENST00000365367 106 ntBASIC1.19□□□□□ -2.22
SMSP52788 Y_RNA.474-201ENST00000384341 102 ntBASIC1.19□□□□□ -2.22
SMSP52788 RNU6-310P-201ENST00000384655 107 ntBASIC1.19□□□□□ -2.22
SMSP52788 RNU6-376P-201ENST00000384731 106 ntBASIC1.19□□□□□ -2.22
SMSP52788 MIR613-201ENST00000385248 95 ntBASIC1.19□□□□□ -2.22
SMSP52788 RNU6-1156P-201ENST00000410365 100 ntBASIC1.19□□□□□ -2.22
SMSP52788 Y_RNA.646-201ENST00000410980 101 ntBASIC1.19□□□□□ -2.22
SMSP52788 RNU6-370P-201ENST00000411008 104 ntBASIC1.19□□□□□ -2.22
SMSP52788 RNU2-56P-201ENST00000516826 190 ntBASIC1.19□□□□□ -2.22
SMSP52788 RNU7-4P-201ENST00000516961 62 ntBASIC1.19□□□□□ -2.22
SMSP52788 RNU6-1213P-201ENST00000517075 94 ntBASIC1.19□□□□□ -2.22
SMSP52788 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SMSP52788 AC091812.1-201ENST00000432235 1948 ntBASIC1.19□□□□□ -2.22
SMSP52788 SNORA1B-201ENST00000362535 133 ntBASIC1.18□□□□□ -2.22
SMSP52788 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.18□□□□□ -2.22
SMSP52788 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.18□□□□□ -2.22
SMSP52788 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.18□□□□□ -2.22
SMSP52788 RPS4XP11-201ENST00000446897 772 ntBASIC1.18□□□□□ -2.22
SMSP52788 MTND4P17-201ENST00000470444 350 ntBASIC1.18□□□□□ -2.22
SMSP52788 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.18□□□□□ -2.22
SMSP52788 SNORA20.3-201ENST00000516880 132 ntBASIC1.18□□□□□ -2.22
SMSP52788 RNU2-12P-201ENST00000517216 168 ntBASIC1.18□□□□□ -2.22
SMSP52788 AC090049.2-201ENST00000550377 109 ntBASIC1.18□□□□□ -2.22
SMSP52788 GHRLOS.1-201ENST00000610995 70 ntBASIC1.18□□□□□ -2.22
SMSP52788 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SMSP52788 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.17□□□□□ -2.22
SMSP52788 SNORA70.7-201ENST00000384159 133 ntBASIC1.17□□□□□ -2.22
SMSP52788 RNY3P4-201ENST00000384428 101 ntBASIC1.17□□□□□ -2.22
SMSP52788 CALM2P4-201ENST00000430810 426 ntBASIC1.17□□□□□ -2.22
SMSP52788 HSPE1P13-201ENST00000451143 297 ntBASIC1.17□□□□□ -2.22
SMSP52788 AC022493.2-201ENST00000506122 481 ntBASIC1.17□□□□□ -2.22
SMSP52788 SNORD116-28-201ENST00000516123 91 ntBASIC1.17□□□□□ -2.22
SMSP52788 RN7SKP179-201ENST00000516126 217 ntBASIC1.17□□□□□ -2.22
SMSP52788 AC144568.1-201ENST00000520139 137 ntBASIC1.17□□□□□ -2.22
SMSP52788 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.17□□□□□ -2.22
SMSP52788 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.17□□□□□ -2.22
SMSP52788 AC113139.1-201ENST00000605049 239 ntBASIC1.17□□□□□ -2.22
SMSP52788 RMST_2.1-201ENST00000617263 136 ntBASIC1.17□□□□□ -2.22
SMSP52788 Y_RNA.267-201ENST00000364679 109 ntBASIC1.16□□□□□ -2.22
SMSP52788 SNORA2.2-201ENST00000365473 135 ntBASIC1.16□□□□□ -2.22
SMSP52788 SNORA40.6-201ENST00000391153 128 ntBASIC1.16□□□□□ -2.22
SMSP52788 U8.16-201ENST00000391279 133 ntBASIC1.16□□□□□ -2.22
SMSP52788 RNU6-1054P-201ENST00000411293 104 ntBASIC1.16□□□□□ -2.22
SMSP52788 AC138393.2-201ENST00000414742 246 ntBASIC1.16□□□□□ -2.22
SMSP52788 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.16□□□□□ -2.22
SMSP52788 AC098614.3-201ENST00000438957 440 ntBASIC1.16□□□□□ -2.22
SMSP52788 RPS23P4-201ENST00000487908 423 ntBASIC1.16□□□□□ -2.22
SMSP52788 PRDX4P1-201ENST00000507189 574 ntBASIC1.16□□□□□ -2.22
SMSP52788 RNU6-470P-201ENST00000515954 104 ntBASIC1.16□□□□□ -2.22
SMSP52788 RNU7-40P-201ENST00000516397 64 ntBASIC1.16□□□□□ -2.22
SMSP52788 RNU6-911P-201ENST00000516523 104 ntBASIC1.16□□□□□ -2.22
SMSP52788 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.16□□□□□ -2.22
SMSP52788 AC099654.14-201ENST00000638599 341 ntBASIC1.16□□□□□ -2.22
SMSP52788 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SMSP52788 MIRLET7C-201ENST00000362160 84 ntBASIC1.15□□□□□ -2.23
SMSP52788 Y_RNA.124-201ENST00000363339 93 ntBASIC1.15□□□□□ -2.23
SMSP52788 SNORD115-30-201ENST00000364117 82 ntBASIC1.15□□□□□ -2.23
SMSP52788 RNY1-201ENST00000364228 113 ntBASIC1.15□□□□□ -2.23
SMSP52788 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.15□□□□□ -2.23
SMSP52788 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.15□□□□□ -2.23
SMSP52788 RBMX2P4-201ENST00000441256 376 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms