Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 TRBVB-201ENST00000477100 408 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 RNU2-34P-201ENST00000516534 121 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 MIR4287-201ENST00000579398 78 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.54□□□□□ -2.16
HCFC1P51610 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HCFC1P51610 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.54□□□□□ -2.16
HCFC1P51610 Y_RNA.14-201ENST00000362415 103 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 Y_RNA.183-201ENST00000363882 113 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 SNORA3A-201ENST00000364113 130 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 RNU6-1240P-201ENST00000365155 104 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 RNA5SP489-201ENST00000410986 109 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 MTCO1P5-201ENST00000433573 344 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 MTCO1P44-201ENST00000441935 243 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 AL021397.1-201ENST00000451806 248 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 Y_RNA.668-201ENST00000516233 93 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 RNU6-667P-201ENST00000517186 102 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 SNORA31.25-201ENST00000517242 134 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 MIR3145-201ENST00000580727 82 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 AL512605.2-201ENST00000592972 256 ntBASIC1.54□□□□□ -2.16
HCFC1P51610 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.54□□□□□ -2.16
HCFC1P51610 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HCFC1P51610 Y_RNA.101-201ENST00000363154 102 ntBASIC1.53□□□□□ -2.16
HCFC1P51610 Y_RNA.105-201ENST00000363182 111 ntBASIC1.53□□□□□ -2.16
HCFC1P51610 SNORD113-8-201ENST00000363497 74 ntBASIC1.53□□□□□ -2.16
HCFC1P51610 Y_RNA.243-201ENST00000364481 109 ntBASIC1.53□□□□□ -2.16
HCFC1P51610 MIR568-201ENST00000385036 95 ntBASIC1.53□□□□□ -2.16
HCFC1P51610 RNA5SP467-201ENST00000391274 118 ntBASIC1.53□□□□□ -2.16
HCFC1P51610 RNU6-1203P-201ENST00000410703 110 ntBASIC1.53□□□□□ -2.16
HCFC1P51610 RNA5SP450-201ENST00000411206 102 ntBASIC1.53□□□□□ -2.16
HCFC1P51610 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.53□□□□□ -2.16
HCFC1P51610 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.53□□□□□ -2.16
HCFC1P51610 AP002001.1-203ENST00000534002 267 ntBASIC1.53□□□□□ -2.16
HCFC1P51610 CBX3P4-201ENST00000538909 354 ntBASIC1.53□□□□□ -2.16
HCFC1P51610 MIR4419B-201ENST00000577260 68 ntBASIC1.53□□□□□ -2.16
HCFC1P51610 MIR4438-201ENST00000585271 93 ntBASIC1.53□□□□□ -2.16
HCFC1P51610 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.53□□□□□ -2.16
HCFC1P51610 AC004467.1-201ENST00000615678 330 ntBASIC1.53□□□□□ -2.16
HCFC1P51610 Y_RNA.149-201ENST00000363558 117 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 RNU1-148P-201ENST00000384472 162 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 RNU6-21P-201ENST00000384710 107 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 RNU6-1105P-201ENST00000384774 107 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 MIR518E-201ENST00000385252 88 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.52□□□□□ -2.17
HCFC1P51610 BTF3P11-201ENST00000426582 477 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 HMGN2P18-201ENST00000450680 270 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 SNORD65B-201ENST00000459126 73 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 RNA5SP233-201ENST00000459153 113 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 AC091179.3-201ENST00000474761 144 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.52□□□□□ -2.17
HCFC1P51610 RNU6-1053P-201ENST00000515930 101 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.52□□□□□ -2.17
HCFC1P51610 AP000942.4-201ENST00000604811 241 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.52□□□□□ -2.17
HCFC1P51610 WWP1P1-201ENST00000466609 2769 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
HCFC1P51610 SNORA25B-201ENST00000365507 128 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 RNU6-418P-201ENST00000384035 107 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 RNU6-937P-201ENST00000384325 106 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 RNU6-1199P-201ENST00000411249 104 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 AC091021.1-201ENST00000468051 388 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 SEPT14P8-201ENST00000508026 178 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 RNU6-856P-201ENST00000516959 98 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.52□□□□□ -2.17
HCFC1P51610 AC005357.1-201ENST00000588399 301 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 AC062037.2-201ENST00000610137 73 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.52□□□□□ -2.17
HCFC1P51610 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.52□□□□□ -2.17
HCFC1P51610 AC131280.1-202ENST00000624067 4211 ntBASIC1.52□□□□□ -2.17
HCFC1P51610 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HCFC1P51610 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.51□□□□□ -2.17
HCFC1P51610 UBE2WP1-201ENST00000362030 340 ntBASIC1.51□□□□□ -2.17
HCFC1P51610 Y_RNA.136-201ENST00000363444 102 ntBASIC1.51□□□□□ -2.17
HCFC1P51610 RNU6-702P-201ENST00000364982 107 ntBASIC1.51□□□□□ -2.17
HCFC1P51610 SNORA25.9-201ENST00000365087 128 ntBASIC1.51□□□□□ -2.17
HCFC1P51610 Y_RNA.352-201ENST00000365439 102 ntBASIC1.51□□□□□ -2.17
HCFC1P51610 MIR548B-201ENST00000385247 97 ntBASIC1.51□□□□□ -2.17
HCFC1P51610 RNA5SP465-201ENST00000391195 109 ntBASIC1.51□□□□□ -2.17
HCFC1P51610 AC018868.1-201ENST00000491307 315 ntBASIC1.51□□□□□ -2.17
HCFC1P51610 RNU6-107P-201ENST00000516643 102 ntBASIC1.51□□□□□ -2.17
HCFC1P51610 RNU6-1271P-201ENST00000517049 105 ntBASIC1.51□□□□□ -2.17
HCFC1P51610 RNU2-19P-201ENST00000517288 84 ntBASIC1.51□□□□□ -2.17
HCFC1P51610 AC007229.1-201ENST00000590455 412 ntBASIC1.51□□□□□ -2.17
HCFC1P51610 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.51□□□□□ -2.17
HCFC1P51610 MIR8062-201ENST00000621515 85 ntBASIC1.51□□□□□ -2.17
HCFC1P51610 U6.104-201ENST00000637979 90 ntBASIC1.51□□□□□ -2.17
HCFC1P51610 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
HCFC1P51610 SNORD27-201ENST00000363981 72 ntBASIC1.5□□□□□ -2.17
HCFC1P51610 RNU6-743P-201ENST00000364151 106 ntBASIC1.5□□□□□ -2.17
HCFC1P51610 MIR1253-201ENST00000408273 105 ntBASIC1.5□□□□□ -2.17
HCFC1P51610 RN7SKP101-201ENST00000411376 320 ntBASIC1.5□□□□□ -2.17
HCFC1P51610 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.5□□□□□ -2.17
HCFC1P51610 AC123900.1-201ENST00000420390 96 ntBASIC1.5□□□□□ -2.17
HCFC1P51610 SNORD127-201ENST00000458892 86 ntBASIC1.5□□□□□ -2.17
HCFC1P51610 RNU7-94P-201ENST00000459576 63 ntBASIC1.5□□□□□ -2.17
HCFC1P51610 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.5□□□□□ -2.17
HCFC1P51610 AC069114.2-201ENST00000604699 304 ntBASIC1.5□□□□□ -2.17
HCFC1P51610 AL590240.4-201ENST00000616908 390 ntBASIC1.5□□□□□ -2.17
HCFC1P51610 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.5□□□□□ -2.17
HCFC1P51610 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms