Protein–RNA interactions for Protein: P50479

PDLIM4, PDZ and LIM domain protein 4, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4P50479 Y_RNA.270-201ENST00000364693 104 ntBASIC2.02□□□□□ -2.09
PDLIM4P50479 RNU6-438P-201ENST00000365561 103 ntBASIC2.02□□□□□ -2.09
PDLIM4P50479 SNORA20B-201ENST00000384220 132 ntBASIC2.02□□□□□ -2.09
PDLIM4P50479 RNU6-763P-201ENST00000390865 106 ntBASIC2.02□□□□□ -2.09
PDLIM4P50479 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
PDLIM4P50479 AC079804.2-201ENST00000490376 200 ntBASIC2.02□□□□□ -2.09
PDLIM4P50479 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.02□□□□□ -2.09
PDLIM4P50479 RNA5SP281-201ENST00000516504 135 ntBASIC2.02□□□□□ -2.09
PDLIM4P50479 RNA5SP490-201ENST00000517141 136 ntBASIC2.02□□□□□ -2.09
PDLIM4P50479 AC024405.2-202ENST00000532731 184 ntBASIC2.02□□□□□ -2.09
PDLIM4P50479 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.02□□□□□ -2.09
PDLIM4P50479 AC103810.6-201ENST00000606708 136 ntBASIC2.02□□□□□ -2.09
PDLIM4P50479 AC013791.1-201ENST00000616619 62 ntBASIC2.02□□□□□ -2.09
PDLIM4P50479 MIR6873-201ENST00000622788 63 ntBASIC2.02□□□□□ -2.09
PDLIM4P50479 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PDLIM4P50479 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.02□□□□□ -2.09
PDLIM4P50479 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PDLIM4P50479 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PDLIM4P50479 AL596028.1-201ENST00000326971 197 ntBASIC2.01□□□□□ -2.09
PDLIM4P50479 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PDLIM4P50479 RNU6-682P-201ENST00000363843 106 ntBASIC2.01□□□□□ -2.09
PDLIM4P50479 Y_RNA.240-201ENST00000364469 95 ntBASIC2.01□□□□□ -2.09
PDLIM4P50479 RNA5SP125-201ENST00000364843 120 ntBASIC2.01□□□□□ -2.09
PDLIM4P50479 Y_RNA.287-201ENST00000364853 94 ntBASIC2.01□□□□□ -2.09
PDLIM4P50479 SNORA26.5-201ENST00000391215 123 ntBASIC2.01□□□□□ -2.09
PDLIM4P50479 SRIP3-201ENST00000413200 219 ntBASIC2.01□□□□□ -2.09
PDLIM4P50479 AC010154.1-201ENST00000425857 269 ntBASIC2.01□□□□□ -2.09
PDLIM4P50479 BTF3P11-201ENST00000426582 477 ntBASIC2.01□□□□□ -2.09
PDLIM4P50479 AC010531.2-201ENST00000465012 153 ntBASIC2.01□□□□□ -2.09
PDLIM4P50479 RPS29P21-201ENST00000496272 170 ntBASIC2.01□□□□□ -2.09
PDLIM4P50479 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.01□□□□□ -2.09
PDLIM4P50479 AC026436.1-201ENST00000510537 270 ntBASIC2.01□□□□□ -2.09
PDLIM4P50479 AC107393.1-201ENST00000512403 346 ntBASIC2.01□□□□□ -2.09
PDLIM4P50479 SUMO2P18-201ENST00000518873 252 ntBASIC2.01□□□□□ -2.09
PDLIM4P50479 MIR1273D-201ENST00000577266 86 ntBASIC2.01□□□□□ -2.09
PDLIM4P50479 MIR4648-201ENST00000580107 72 ntBASIC2.01□□□□□ -2.09
PDLIM4P50479 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.01□□□□□ -2.09
PDLIM4P50479 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PDLIM4P50479 AC016717.2-201ENST00000609089 5141 ntBASIC2.01□□□□□ -2.09
PDLIM4P50479 AC080100.1-201ENST00000624239 5356 ntBASIC2□□□□□ -2.09
PDLIM4P50479 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PDLIM4P50479 MIR340-201ENST00000362125 95 ntBASIC2□□□□□ -2.09
PDLIM4P50479 Y_RNA.121-201ENST00000363309 113 ntBASIC2□□□□□ -2.09
PDLIM4P50479 RNU6-899P-201ENST00000363947 107 ntBASIC2□□□□□ -2.09
PDLIM4P50479 RNU6-743P-201ENST00000364151 106 ntBASIC2□□□□□ -2.09
PDLIM4P50479 Y_RNA.233-201ENST00000364407 101 ntBASIC2□□□□□ -2.09
PDLIM4P50479 RNU6-1240P-201ENST00000365155 104 ntBASIC2□□□□□ -2.09
PDLIM4P50479 Y_RNA.341-201ENST00000365341 102 ntBASIC2□□□□□ -2.09
PDLIM4P50479 RNU6-47P-201ENST00000383866 107 ntBASIC2□□□□□ -2.09
PDLIM4P50479 RN7SKP223-201ENST00000410582 62 ntBASIC2□□□□□ -2.09
PDLIM4P50479 RNU6-57P-201ENST00000411348 103 ntBASIC2□□□□□ -2.09
PDLIM4P50479 AC016909.1-201ENST00000415916 166 ntBASIC2□□□□□ -2.09
PDLIM4P50479 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2□□□□□ -2.09
PDLIM4P50479 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2□□□□□ -2.09
PDLIM4P50479 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2□□□□□ -2.09
PDLIM4P50479 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2□□□□□ -2.09
PDLIM4P50479 RPS26P55-201ENST00000471178 356 ntBASIC2□□□□□ -2.09
PDLIM4P50479 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2□□□□□ -2.09
PDLIM4P50479 RNU6-856P-201ENST00000516959 98 ntBASIC2□□□□□ -2.09
PDLIM4P50479 IGKV3-31-201ENST00000523109 329 ntBASIC2□□□□□ -2.09
PDLIM4P50479 AC100767.1-201ENST00000528178 123 ntBASIC2□□□□□ -2.09
PDLIM4P50479 NDUFA5P6-201ENST00000542110 379 ntBASIC2□□□□□ -2.09
PDLIM4P50479 MIR4308-201ENST00000580634 81 ntBASIC2□□□□□ -2.09
PDLIM4P50479 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2□□□□□ -2.09
PDLIM4P50479 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PDLIM4P50479 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.99□□□□□ -2.09
PDLIM4P50479 Y_RNA.150-201ENST00000363562 102 ntBASIC1.99□□□□□ -2.09
PDLIM4P50479 RNU6-144P-201ENST00000383951 107 ntBASIC1.99□□□□□ -2.09
PDLIM4P50479 RNU6-418P-201ENST00000384035 107 ntBASIC1.99□□□□□ -2.09
PDLIM4P50479 MIR504-201ENST00000385065 83 ntBASIC1.99□□□□□ -2.09
PDLIM4P50479 RNU6-855P-201ENST00000410395 104 ntBASIC1.99□□□□□ -2.09
PDLIM4P50479 AC016717.1-201ENST00000448918 286 ntBASIC1.99□□□□□ -2.09
PDLIM4P50479 U8.19-201ENST00000459095 133 ntBASIC1.99□□□□□ -2.09
PDLIM4P50479 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.99□□□□□ -2.09
PDLIM4P50479 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.99□□□□□ -2.09
PDLIM4P50479 AL365434.2-201ENST00000607979 234 ntBASIC1.99□□□□□ -2.09
PDLIM4P50479 AC046143.2-201ENST00000609789 160 ntBASIC1.99□□□□□ -2.09
PDLIM4P50479 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.99□□□□□ -2.09
PDLIM4P50479 CENPCP1-201ENST00000533085 2578 ntBASIC1.99□□□□□ -2.09
PDLIM4P50479 ZNF720P1-201ENST00000562403 1939 ntBASIC1.98□□□□□ -2.09
PDLIM4P50479 RNU6-117P-201ENST00000365415 107 ntBASIC1.98□□□□□ -2.09
PDLIM4P50479 SNORA25B-201ENST00000365507 128 ntBASIC1.98□□□□□ -2.09
PDLIM4P50479 RNU6-1323P-201ENST00000384025 107 ntBASIC1.98□□□□□ -2.09
PDLIM4P50479 MIR526A2-201ENST00000390198 65 ntBASIC1.98□□□□□ -2.09
PDLIM4P50479 COX6CP10-201ENST00000416832 224 ntBASIC1.98□□□□□ -2.09
PDLIM4P50479 AC009238.1-201ENST00000442165 424 ntBASIC1.98□□□□□ -2.09
PDLIM4P50479 AC009237.6-201ENST00000446969 424 ntBASIC1.98□□□□□ -2.09
PDLIM4P50479 RPS20P10-201ENST00000451209 253 ntBASIC1.98□□□□□ -2.09
PDLIM4P50479 RNU6-667P-201ENST00000517186 102 ntBASIC1.98□□□□□ -2.09
PDLIM4P50479 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.98□□□□□ -2.09
PDLIM4P50479 U2.15-201ENST00000611544 191 ntBASIC1.98□□□□□ -2.09
PDLIM4P50479 U2.16-201ENST00000613119 191 ntBASIC1.98□□□□□ -2.09
PDLIM4P50479 U2.12-201ENST00000613778 191 ntBASIC1.98□□□□□ -2.09
PDLIM4P50479 U2.20-201ENST00000613956 192 ntBASIC1.98□□□□□ -2.09
PDLIM4P50479 U2.9-201ENST00000615427 191 ntBASIC1.98□□□□□ -2.09
PDLIM4P50479 U2.11-201ENST00000616345 191 ntBASIC1.98□□□□□ -2.09
PDLIM4P50479 U2.2-201ENST00000616535 191 ntBASIC1.98□□□□□ -2.09
PDLIM4P50479 U2.3-201ENST00000617785 191 ntBASIC1.98□□□□□ -2.09
PDLIM4P50479 U2.19-201ENST00000618602 191 ntBASIC1.98□□□□□ -2.09
PDLIM4P50479 RNU2-1-201ENST00000618664 191 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms