Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.87□□□□□ -1.95
MRE11P49959 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.87□□□□□ -1.95
MRE11P49959 MIR449C-201ENST00000516047 92 ntBASIC2.87□□□□□ -1.95
MRE11P49959 CTSLP2-204ENST00000629029 392 ntBASIC2.87□□□□□ -1.95
MRE11P49959 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
MRE11P49959 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.87□□□□□ -1.95
MRE11P49959 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
MRE11P49959 RNU6-944P-201ENST00000364023 107 ntBASIC2.86□□□□□ -1.95
MRE11P49959 Y_RNA.272-201ENST00000364696 102 ntBASIC2.86□□□□□ -1.95
MRE11P49959 Y_RNA.310-201ENST00000365063 113 ntBASIC2.86□□□□□ -1.95
MRE11P49959 MIR1294-201ENST00000408503 142 ntBASIC2.86□□□□□ -1.95
MRE11P49959 RNU6-855P-201ENST00000410395 104 ntBASIC2.86□□□□□ -1.95
MRE11P49959 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.86□□□□□ -1.95
MRE11P49959 MIR7157-201ENST00000635801 60 ntBASIC2.86□□□□□ -1.95
MRE11P49959 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
MRE11P49959 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
MRE11P49959 AC134026.1-201ENST00000623249 2239 ntBASIC2.85□□□□□ -1.95
MRE11P49959 MIR21-201ENST00000362134 72 ntBASIC2.85□□□□□ -1.95
MRE11P49959 RNA5SP289-201ENST00000362332 137 ntBASIC2.85□□□□□ -1.95
MRE11P49959 Y_RNA.75-201ENST00000362927 97 ntBASIC2.85□□□□□ -1.95
MRE11P49959 Y_RNA.182-201ENST00000363880 111 ntBASIC2.85□□□□□ -1.95
MRE11P49959 RNU6-704P-201ENST00000364162 103 ntBASIC2.85□□□□□ -1.95
MRE11P49959 RNU6-312P-201ENST00000364629 107 ntBASIC2.85□□□□□ -1.95
MRE11P49959 SNORD113-1-201ENST00000365321 69 ntBASIC2.85□□□□□ -1.95
MRE11P49959 Y_RNA.341-201ENST00000365341 102 ntBASIC2.85□□□□□ -1.95
MRE11P49959 RNA5SP240-201ENST00000365355 128 ntBASIC2.85□□□□□ -1.95
MRE11P49959 RNU6-1130P-201ENST00000365434 107 ntBASIC2.85□□□□□ -1.95
MRE11P49959 SNORD50.2-201ENST00000365465 70 ntBASIC2.85□□□□□ -1.95
MRE11P49959 Y_RNA.456-201ENST00000384232 111 ntBASIC2.85□□□□□ -1.95
MRE11P49959 Y_RNA.580-201ENST00000391004 95 ntBASIC2.85□□□□□ -1.95
MRE11P49959 RNU6-381P-201ENST00000391259 108 ntBASIC2.85□□□□□ -1.95
MRE11P49959 MIR1283-1-201ENST00000408494 87 ntBASIC2.85□□□□□ -1.95
MRE11P49959 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.85□□□□□ -1.95
MRE11P49959 RNU7-14P-201ENST00000459331 62 ntBASIC2.85□□□□□ -1.95
MRE11P49959 SNORA70.12-201ENST00000516084 153 ntBASIC2.85□□□□□ -1.95
MRE11P49959 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.85□□□□□ -1.95
MRE11P49959 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.85□□□□□ -1.95
MRE11P49959 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
MRE11P49959 AC131280.1-202ENST00000624067 4211 ntBASIC2.85□□□□□ -1.95
MRE11P49959 MIR337-201ENST00000362281 93 ntBASIC2.84□□□□□ -1.95
MRE11P49959 Y_RNA.23-201ENST00000362496 106 ntBASIC2.84□□□□□ -1.95
MRE11P49959 SNORA38-201ENST00000363946 132 ntBASIC2.84□□□□□ -1.95
MRE11P49959 RNU1-51P-201ENST00000365345 176 ntBASIC2.84□□□□□ -1.95
MRE11P49959 MIR300-201ENST00000401138 83 ntBASIC2.84□□□□□ -1.95
MRE11P49959 AL355497.1-201ENST00000406262 551 ntBASIC2.84□□□□□ -1.95
MRE11P49959 AL606753.1-201ENST00000427435 87 ntBASIC2.84□□□□□ -1.95
MRE11P49959 AC104389.3-201ENST00000445629 235 ntBASIC2.84□□□□□ -1.95
MRE11P49959 RPS20P10-201ENST00000451209 253 ntBASIC2.84□□□□□ -1.95
MRE11P49959 AC021269.2-201ENST00000532318 330 ntBASIC2.84□□□□□ -1.95
MRE11P49959 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.84□□□□□ -1.95
MRE11P49959 MIR3684-201ENST00000579779 74 ntBASIC2.84□□□□□ -1.95
MRE11P49959 AL713866.2-201ENST00000603579 219 ntBASIC2.84□□□□□ -1.95
MRE11P49959 AC004832.4-201ENST00000608952 331 ntBASIC2.84□□□□□ -1.95
MRE11P49959 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.84□□□□□ -1.95
MRE11P49959 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
MRE11P49959 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
MRE11P49959 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
MRE11P49959 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
MRE11P49959 RNU6-899P-201ENST00000363947 107 ntBASIC2.83□□□□□ -1.96
MRE11P49959 RNU4-10P-201ENST00000364383 140 ntBASIC2.83□□□□□ -1.96
MRE11P49959 Y_RNA.293-201ENST00000364908 93 ntBASIC2.83□□□□□ -1.96
MRE11P49959 SNORD116-18-201ENST00000383961 92 ntBASIC2.83□□□□□ -1.96
MRE11P49959 RNU6-1328P-201ENST00000410938 106 ntBASIC2.83□□□□□ -1.96
MRE11P49959 MICF-203ENST00000432679 129 ntBASIC2.83□□□□□ -1.96
MRE11P49959 RNU7-57P-201ENST00000459540 60 ntBASIC2.83□□□□□ -1.96
MRE11P49959 ATP5EP1-201ENST00000510257 156 ntBASIC2.83□□□□□ -1.96
MRE11P49959 IGLV3-17-201ENST00000519099 244 ntBASIC2.83□□□□□ -1.96
MRE11P49959 AC090616.3-201ENST00000582184 217 ntBASIC2.83□□□□□ -1.96
MRE11P49959 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
MRE11P49959 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.82□□□□□ -1.96
MRE11P49959 MIRLET7G-201ENST00000362280 84 ntBASIC2.82□□□□□ -1.96
MRE11P49959 SNORD114-7-201ENST00000362520 77 ntBASIC2.82□□□□□ -1.96
MRE11P49959 Y_RNA.124-201ENST00000363339 93 ntBASIC2.82□□□□□ -1.96
MRE11P49959 RNA5SP456-201ENST00000364002 114 ntBASIC2.82□□□□□ -1.96
MRE11P49959 snoU2_19.4-201ENST00000364329 80 ntBASIC2.82□□□□□ -1.96
MRE11P49959 SNORD114-30-201ENST00000364448 72 ntBASIC2.82□□□□□ -1.96
MRE11P49959 RNU6-234P-201ENST00000365229 104 ntBASIC2.82□□□□□ -1.96
MRE11P49959 MIR626-201ENST00000385032 94 ntBASIC2.82□□□□□ -1.96
MRE11P49959 AL138827.1-201ENST00000402666 306 ntBASIC2.82□□□□□ -1.96
MRE11P49959 AL355796.1-201ENST00000406706 323 ntBASIC2.82□□□□□ -1.96
MRE11P49959 MIR548I2-201ENST00000408348 149 ntBASIC2.82□□□□□ -1.96
MRE11P49959 RNA5SP21-201ENST00000410917 96 ntBASIC2.82□□□□□ -1.96
MRE11P49959 RPL30P4-201ENST00000429309 333 ntBASIC2.82□□□□□ -1.96
MRE11P49959 SEPT7P4-201ENST00000437076 306 ntBASIC2.82□□□□□ -1.96
MRE11P49959 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.82□□□□□ -1.96
MRE11P49959 RNU7-141P-201ENST00000459304 62 ntBASIC2.82□□□□□ -1.96
MRE11P49959 AC005840.1-201ENST00000498412 377 ntBASIC2.82□□□□□ -1.96
MRE11P49959 AC096725.1-201ENST00000514266 313 ntBASIC2.82□□□□□ -1.96
MRE11P49959 RN7SKP164-201ENST00000516138 266 ntBASIC2.82□□□□□ -1.96
MRE11P49959 RNU6-586P-201ENST00000517265 104 ntBASIC2.82□□□□□ -1.96
MRE11P49959 MIR5194-201ENST00000582634 120 ntBASIC2.82□□□□□ -1.96
MRE11P49959 MIR4753-201ENST00000585119 83 ntBASIC2.82□□□□□ -1.96
MRE11P49959 AC069294.1-201ENST00000608397 350 ntBASIC2.82□□□□□ -1.96
MRE11P49959 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.82□□□□□ -1.96
MRE11P49959 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.82□□□□□ -1.96
MRE11P49959 MTND1P7-201ENST00000632801 297 ntBASIC2.82□□□□□ -1.96
MRE11P49959 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
MRE11P49959 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
MRE11P49959 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
MRE11P49959 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms