Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
CSNK1A1P48729 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
CSNK1A1P48729 MIRLET7C-201ENST00000362160 84 ntBASIC0.83□□□□□ -2.28
CSNK1A1P48729 RNU6-99P-201ENST00000364721 107 ntBASIC0.83□□□□□ -2.28
CSNK1A1P48729 MIR222-201ENST00000384992 110 ntBASIC0.83□□□□□ -2.28
CSNK1A1P48729 SNORD12-201ENST00000391002 90 ntBASIC0.83□□□□□ -2.28
CSNK1A1P48729 RNU6-192P-201ENST00000391253 100 ntBASIC0.83□□□□□ -2.28
CSNK1A1P48729 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CSNK1A1P48729 RNA5SP475-201ENST00000410568 110 ntBASIC0.83□□□□□ -2.28
CSNK1A1P48729 RNU5A-5P-201ENST00000411054 116 ntBASIC0.83□□□□□ -2.28
CSNK1A1P48729 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.83□□□□□ -2.28
CSNK1A1P48729 RNU6-1291P-201ENST00000516591 104 ntBASIC0.83□□□□□ -2.28
CSNK1A1P48729 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.83□□□□□ -2.28
CSNK1A1P48729 AC005899.2-201ENST00000584353 90 ntBASIC0.83□□□□□ -2.28
CSNK1A1P48729 AC080078.2-201ENST00000603766 501 ntBASIC0.83□□□□□ -2.28
CSNK1A1P48729 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.83□□□□□ -2.28
CSNK1A1P48729 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.83□□□□□ -2.28
CSNK1A1P48729 AC139792.2-201ENST00000624218 587 ntBASIC0.83□□□□□ -2.28
CSNK1A1P48729 RNU6-845P-201ENST00000362578 103 ntBASIC0.82□□□□□ -2.28
CSNK1A1P48729 Y_RNA.243-201ENST00000364481 109 ntBASIC0.82□□□□□ -2.28
CSNK1A1P48729 RNU6-767P-201ENST00000384132 107 ntBASIC0.82□□□□□ -2.28
CSNK1A1P48729 RNU6-136P-201ENST00000384663 107 ntBASIC0.82□□□□□ -2.28
CSNK1A1P48729 RNU6-376P-201ENST00000384731 106 ntBASIC0.82□□□□□ -2.28
CSNK1A1P48729 MIR873-201ENST00000401120 77 ntBASIC0.82□□□□□ -2.28
CSNK1A1P48729 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.82□□□□□ -2.28
CSNK1A1P48729 SNORD12B-201ENST00000410433 91 ntBASIC0.82□□□□□ -2.28
CSNK1A1P48729 RNU6-1054P-201ENST00000411293 104 ntBASIC0.82□□□□□ -2.28
CSNK1A1P48729 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.82□□□□□ -2.28
CSNK1A1P48729 Z98949.2-201ENST00000440996 144 ntBASIC0.82□□□□□ -2.28
CSNK1A1P48729 AC048334.1-201ENST00000477975 159 ntBASIC0.82□□□□□ -2.28
CSNK1A1P48729 RNU6-63P-201ENST00000516690 95 ntBASIC0.82□□□□□ -2.28
CSNK1A1P48729 RNU7-28P-201ENST00000516759 62 ntBASIC0.82□□□□□ -2.28
CSNK1A1P48729 RNU2-56P-201ENST00000516826 190 ntBASIC0.82□□□□□ -2.28
CSNK1A1P48729 SNORA70.22-201ENST00000517160 124 ntBASIC0.82□□□□□ -2.28
CSNK1A1P48729 AP002004.2-201ENST00000531656 154 ntBASIC0.82□□□□□ -2.28
CSNK1A1P48729 AC090049.2-201ENST00000550377 109 ntBASIC0.82□□□□□ -2.28
CSNK1A1P48729 AC087588.2-201ENST00000617667 426 ntBASIC0.82□□□□□ -2.28
CSNK1A1P48729 AC127459.3-201ENST00000624328 466 ntBASIC0.82□□□□□ -2.28
CSNK1A1P48729 CASC19-280ENST00000642102 1351 ntBASIC0.82□□□□□ -2.28
CSNK1A1P48729 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.81□□□□□ -2.28
CSNK1A1P48729 Y_RNA.279-201ENST00000364763 95 ntBASIC0.81□□□□□ -2.28
CSNK1A1P48729 RNU1-36P-201ENST00000365130 165 ntBASIC0.81□□□□□ -2.28
CSNK1A1P48729 RNU6-1080P-201ENST00000383982 107 ntBASIC0.81□□□□□ -2.28
CSNK1A1P48729 RNU11-5P-201ENST00000391216 129 ntBASIC0.81□□□□□ -2.28
CSNK1A1P48729 PDCL2P1-201ENST00000419302 352 ntBASIC0.81□□□□□ -2.28
CSNK1A1P48729 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.81□□□□□ -2.28
CSNK1A1P48729 Y_RNA.638-201ENST00000459374 113 ntBASIC0.81□□□□□ -2.28
CSNK1A1P48729 MTND4P17-201ENST00000470444 350 ntBASIC0.81□□□□□ -2.28
CSNK1A1P48729 AC105758.1-201ENST00000506038 399 ntBASIC0.81□□□□□ -2.28
CSNK1A1P48729 SNORA31.2-201ENST00000516019 134 ntBASIC0.81□□□□□ -2.28
CSNK1A1P48729 RNU7-12P-201ENST00000516030 62 ntBASIC0.81□□□□□ -2.28
CSNK1A1P48729 Y_RNA.691-201ENST00000516611 103 ntBASIC0.81□□□□□ -2.28
CSNK1A1P48729 AC055872.1-201ENST00000570978 278 ntBASIC0.81□□□□□ -2.28
CSNK1A1P48729 AL117336.2-201ENST00000602435 335 ntBASIC0.81□□□□□ -2.28
CSNK1A1P48729 AL669831.3-213ENST00000636676 183 ntBASIC0.81□□□□□ -2.28
CSNK1A1P48729 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
CSNK1A1P48729 MIR337-201ENST00000362281 93 ntBASIC0.8□□□□□ -2.28
CSNK1A1P48729 SNORD114-27-201ENST00000363766 70 ntBASIC0.8□□□□□ -2.28
CSNK1A1P48729 RNU6-961P-201ENST00000363893 105 ntBASIC0.8□□□□□ -2.28
CSNK1A1P48729 RNU4-41P-201ENST00000364426 143 ntBASIC0.8□□□□□ -2.28
CSNK1A1P48729 Y_RNA.361-201ENST00000365515 120 ntBASIC0.8□□□□□ -2.28
CSNK1A1P48729 Y_RNA.363-201ENST00000365529 113 ntBASIC0.8□□□□□ -2.28
CSNK1A1P48729 MIR562-201ENST00000384894 95 ntBASIC0.8□□□□□ -2.28
CSNK1A1P48729 MIR532-201ENST00000385025 91 ntBASIC0.8□□□□□ -2.28
CSNK1A1P48729 RNU6-910P-201ENST00000390844 107 ntBASIC0.8□□□□□ -2.28
CSNK1A1P48729 RNA5SP482-201ENST00000391269 118 ntBASIC0.8□□□□□ -2.28
CSNK1A1P48729 AC114482.1-201ENST00000418010 247 ntBASIC0.8□□□□□ -2.28
CSNK1A1P48729 RPL23AP50-201ENST00000434149 455 ntBASIC0.8□□□□□ -2.28
CSNK1A1P48729 MIR2053-201ENST00000459295 91 ntBASIC0.8□□□□□ -2.28
CSNK1A1P48729 AC022493.2-201ENST00000506122 481 ntBASIC0.8□□□□□ -2.28
CSNK1A1P48729 RNU6-408P-201ENST00000515910 100 ntBASIC0.8□□□□□ -2.28
CSNK1A1P48729 RNU6-1278P-201ENST00000516130 107 ntBASIC0.8□□□□□ -2.28
CSNK1A1P48729 RNU6-1116P-201ENST00000517269 99 ntBASIC0.8□□□□□ -2.28
CSNK1A1P48729 MTND4LP26-201ENST00000518144 282 ntBASIC0.8□□□□□ -2.28
CSNK1A1P48729 AL020996.3-201ENST00000606617 222 ntBASIC0.8□□□□□ -2.28
CSNK1A1P48729 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
CSNK1A1P48729 SNORD114-7-201ENST00000362520 77 ntBASIC0.79□□□□□ -2.28
CSNK1A1P48729 Y_RNA.160-201ENST00000363677 92 ntBASIC0.79□□□□□ -2.28
CSNK1A1P48729 Y_RNA.166-201ENST00000363730 102 ntBASIC0.79□□□□□ -2.28
CSNK1A1P48729 SNORA2.2-201ENST00000365473 135 ntBASIC0.79□□□□□ -2.28
CSNK1A1P48729 MT-TL1-201ENST00000386347 75 ntBASIC0.79□□□□□ -2.28
CSNK1A1P48729 RNA5SP511-201ENST00000410487 115 ntBASIC0.79□□□□□ -2.28
CSNK1A1P48729 AC233266.1-201ENST00000454518 96 ntBASIC0.79□□□□□ -2.28
CSNK1A1P48729 AL049830.1-201ENST00000468034 425 ntBASIC0.79□□□□□ -2.28
CSNK1A1P48729 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.79□□□□□ -2.28
CSNK1A1P48729 RNU6-947P-201ENST00000516264 106 ntBASIC0.79□□□□□ -2.28
CSNK1A1P48729 RNU6-307P-201ENST00000516743 106 ntBASIC0.79□□□□□ -2.28
CSNK1A1P48729 RNU6-1096P-201ENST00000517089 102 ntBASIC0.79□□□□□ -2.28
CSNK1A1P48729 MIR2355-201ENST00000517199 87 ntBASIC0.79□□□□□ -2.28
CSNK1A1P48729 RNU2-12P-201ENST00000517216 168 ntBASIC0.79□□□□□ -2.28
CSNK1A1P48729 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.79□□□□□ -2.28
CSNK1A1P48729 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.79□□□□□ -2.28
CSNK1A1P48729 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
CSNK1A1P48729 AC242852.1-201ENST00000612151 96 ntBASIC0.79□□□□□ -2.28
CSNK1A1P48729 AC004467.1-201ENST00000615678 330 ntBASIC0.79□□□□□ -2.28
CSNK1A1P48729 AC244015.1-201ENST00000622301 99 ntBASIC0.79□□□□□ -2.28
CSNK1A1P48729 AC098679.4-201ENST00000624241 654 ntBASIC0.79□□□□□ -2.28
CSNK1A1P48729 RNU4-79P-201ENST00000362764 141 ntBASIC0.78□□□□□ -2.28
CSNK1A1P48729 SNORD115-30-201ENST00000364117 82 ntBASIC0.78□□□□□ -2.28
CSNK1A1P48729 RNU6-1310P-201ENST00000384153 107 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 158.1 ms