Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AL355796.1-201ENST00000406706 323 ntBASIC1.51□□□□□ -2.17
NEDD4P46934 MCFD2P1-201ENST00000417812 300 ntBASIC1.51□□□□□ -2.17
NEDD4P46934 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.51□□□□□ -2.17
NEDD4P46934 AC010154.1-201ENST00000425857 269 ntBASIC1.51□□□□□ -2.17
NEDD4P46934 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.51□□□□□ -2.17
NEDD4P46934 MRPS10P1-201ENST00000448483 130 ntBASIC1.51□□□□□ -2.17
NEDD4P46934 Y_RNA.631-201ENST00000459607 101 ntBASIC1.51□□□□□ -2.17
NEDD4P46934 RPS26P45-201ENST00000471748 340 ntBASIC1.51□□□□□ -2.17
NEDD4P46934 RPS27P22-201ENST00000478056 241 ntBASIC1.51□□□□□ -2.17
NEDD4P46934 AC010469.2-201ENST00000496412 480 ntBASIC1.51□□□□□ -2.17
NEDD4P46934 AL163195.1-201ENST00000496941 348 ntBASIC1.51□□□□□ -2.17
NEDD4P46934 MIR4438-201ENST00000585271 93 ntBASIC1.51□□□□□ -2.17
NEDD4P46934 AC005176.2-201ENST00000596933 147 ntBASIC1.51□□□□□ -2.17
NEDD4P46934 AC006380.1-201ENST00000603598 186 ntBASIC1.51□□□□□ -2.17
NEDD4P46934 Y_RNA.772-201ENST00000606692 102 ntBASIC1.51□□□□□ -2.17
NEDD4P46934 AC134503.1-201ENST00000633048 54 ntBASIC1.51□□□□□ -2.17
NEDD4P46934 SNORA27.1-201ENST00000362604 124 ntBASIC1.5□□□□□ -2.17
NEDD4P46934 RNU4-50P-201ENST00000364361 141 ntBASIC1.5□□□□□ -2.17
NEDD4P46934 SNORD14.1-201ENST00000365609 90 ntBASIC1.5□□□□□ -2.17
NEDD4P46934 RNU6-20P-201ENST00000384106 107 ntBASIC1.5□□□□□ -2.17
NEDD4P46934 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
NEDD4P46934 MIR873-201ENST00000401120 77 ntBASIC1.5□□□□□ -2.17
NEDD4P46934 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.5□□□□□ -2.17
NEDD4P46934 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.5□□□□□ -2.17
NEDD4P46934 MTND4P19-201ENST00000446659 478 ntBASIC1.5□□□□□ -2.17
NEDD4P46934 RNU7-94P-201ENST00000459576 63 ntBASIC1.5□□□□□ -2.17
NEDD4P46934 RN7SKP295-201ENST00000517264 153 ntBASIC1.5□□□□□ -2.17
NEDD4P46934 RNU6-988P-201ENST00000519081 107 ntBASIC1.5□□□□□ -2.17
NEDD4P46934 AC103810.8-201ENST00000607347 118 ntBASIC1.5□□□□□ -2.17
NEDD4P46934 AL157834.3-201ENST00000615543 103 ntBASIC1.5□□□□□ -2.17
NEDD4P46934 AL353770.2-201ENST00000620024 78 ntBASIC1.5□□□□□ -2.17
NEDD4P46934 U6.108-201ENST00000637764 58 ntBASIC1.5□□□□□ -2.17
NEDD4P46934 AC005592.1-201ENST00000566527 1640 ntBASIC1.49□□□□□ -2.17
NEDD4P46934 AL391987.6-201ENST00000305671 199 ntBASIC1.49□□□□□ -2.17
NEDD4P46934 Y_RNA.80-201ENST00000362996 102 ntBASIC1.49□□□□□ -2.17
NEDD4P46934 Y_RNA.813-201ENST00000364639 102 ntBASIC1.49□□□□□ -2.17
NEDD4P46934 Y_RNA.424-201ENST00000384063 103 ntBASIC1.49□□□□□ -2.17
NEDD4P46934 RNU6-474P-201ENST00000384243 107 ntBASIC1.49□□□□□ -2.17
NEDD4P46934 Y_RNA.462-201ENST00000384268 102 ntBASIC1.49□□□□□ -2.17
NEDD4P46934 RNU6-950P-201ENST00000384651 107 ntBASIC1.49□□□□□ -2.17
NEDD4P46934 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
NEDD4P46934 RNU2-54P-201ENST00000410299 190 ntBASIC1.49□□□□□ -2.17
NEDD4P46934 RNU6-1186P-201ENST00000410429 97 ntBASIC1.49□□□□□ -2.17
NEDD4P46934 AL390729.2-201ENST00000416137 156 ntBASIC1.49□□□□□ -2.17
NEDD4P46934 HSPE1P9-201ENST00000440046 311 ntBASIC1.49□□□□□ -2.17
NEDD4P46934 U8.20-201ENST00000459445 131 ntBASIC1.49□□□□□ -2.17
NEDD4P46934 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.49□□□□□ -2.17
NEDD4P46934 RNA5SP20-201ENST00000515976 84 ntBASIC1.49□□□□□ -2.17
NEDD4P46934 RNU2-12P-201ENST00000517216 168 ntBASIC1.49□□□□□ -2.17
NEDD4P46934 AC090821.2-201ENST00000523552 176 ntBASIC1.49□□□□□ -2.17
NEDD4P46934 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.49□□□□□ -2.17
NEDD4P46934 AL390123.1-201ENST00000603216 237 ntBASIC1.49□□□□□ -2.17
NEDD4P46934 AC011476.5-201ENST00000615594 130 ntBASIC1.49□□□□□ -2.17
NEDD4P46934 AC007485.1-201ENST00000616755 206 ntBASIC1.49□□□□□ -2.17
NEDD4P46934 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.49□□□□□ -2.17
NEDD4P46934 SNORA33-201ENST00000363664 130 ntBASIC1.48□□□□□ -2.17
NEDD4P46934 RNU6-392P-201ENST00000364926 101 ntBASIC1.48□□□□□ -2.17
NEDD4P46934 Y_RNA.485-201ENST00000384395 102 ntBASIC1.48□□□□□ -2.17
NEDD4P46934 MIR499A-201ENST00000384903 122 ntBASIC1.48□□□□□ -2.17
NEDD4P46934 RNU5A-5P-201ENST00000411054 116 ntBASIC1.48□□□□□ -2.17
NEDD4P46934 PMCHL1-202ENST00000423102 261 ntBASIC1.48□□□□□ -2.17
NEDD4P46934 MTCO2P12-201ENST00000427426 682 ntBASIC1.48□□□□□ -2.17
NEDD4P46934 AC025465.3-201ENST00000510570 311 ntBASIC1.48□□□□□ -2.17
NEDD4P46934 SNORA70.12-201ENST00000516084 153 ntBASIC1.48□□□□□ -2.17
NEDD4P46934 RNU7-128P-201ENST00000517247 62 ntBASIC1.48□□□□□ -2.17
NEDD4P46934 RNA5SP437-201ENST00000517249 129 ntBASIC1.48□□□□□ -2.17
NEDD4P46934 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.48□□□□□ -2.17
NEDD4P46934 AC027419.1-201ENST00000522976 328 ntBASIC1.48□□□□□ -2.17
NEDD4P46934 AC040926.1-201ENST00000530195 238 ntBASIC1.48□□□□□ -2.17
NEDD4P46934 AC023157.2-201ENST00000540596 141 ntBASIC1.48□□□□□ -2.17
NEDD4P46934 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.48□□□□□ -2.17
NEDD4P46934 RPL21P9-201ENST00000556149 474 ntBASIC1.48□□□□□ -2.17
NEDD4P46934 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
NEDD4P46934 Y_RNA.31-201ENST00000362574 102 ntBASIC1.47□□□□□ -2.17
NEDD4P46934 RNU1-22P-201ENST00000363334 158 ntBASIC1.47□□□□□ -2.17
NEDD4P46934 RNU6-414P-201ENST00000363705 104 ntBASIC1.47□□□□□ -2.17
NEDD4P46934 Y_RNA.361-201ENST00000365515 120 ntBASIC1.47□□□□□ -2.17
NEDD4P46934 SNORA63.7-201ENST00000365579 123 ntBASIC1.47□□□□□ -2.17
NEDD4P46934 Y_RNA.458-201ENST00000384240 102 ntBASIC1.47□□□□□ -2.17
NEDD4P46934 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.47□□□□□ -2.17
NEDD4P46934 AC091812.1-201ENST00000432235 1948 ntBASIC1.47□□□□□ -2.17
NEDD4P46934 AC073910.1-201ENST00000445047 438 ntBASIC1.47□□□□□ -2.17
NEDD4P46934 RNU7-172P-201ENST00000517125 64 ntBASIC1.47□□□□□ -2.17
NEDD4P46934 Y_RNA.721-201ENST00000517207 102 ntBASIC1.47□□□□□ -2.17
NEDD4P46934 AC055872.1-201ENST00000570978 278 ntBASIC1.47□□□□□ -2.17
NEDD4P46934 AC022441.3-201ENST00000605737 136 ntBASIC1.47□□□□□ -2.17
NEDD4P46934 MIR8074-201ENST00000615081 81 ntBASIC1.47□□□□□ -2.17
NEDD4P46934 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.47□□□□□ -2.17
NEDD4P46934 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.47□□□□□ -2.17
NEDD4P46934 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.47□□□□□ -2.17
NEDD4P46934 AC117470.1-201ENST00000381974 330 ntBASIC1.46□□□□□ -2.18
NEDD4P46934 Y_RNA.439-201ENST00000384119 94 ntBASIC1.46□□□□□ -2.18
NEDD4P46934 Y_RNA.551-201ENST00000384661 102 ntBASIC1.46□□□□□ -2.18
NEDD4P46934 MIR562-201ENST00000384894 95 ntBASIC1.46□□□□□ -2.18
NEDD4P46934 MIR30A-201ENST00000385092 71 ntBASIC1.46□□□□□ -2.18
NEDD4P46934 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.46□□□□□ -2.18
NEDD4P46934 AC097462.1-201ENST00000514125 324 ntBASIC1.46□□□□□ -2.18
NEDD4P46934 MIR3198-2-201ENST00000577868 80 ntBASIC1.46□□□□□ -2.18
NEDD4P46934 MIR4423-201ENST00000580922 80 ntBASIC1.46□□□□□ -2.18
NEDD4P46934 AC127459.3-201ENST00000624328 466 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 195.6 ms