Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 AC083798.1-201ENST00000472671 131 ntBASIC0.07□□□□□ -2.4
RPL28P46779 AC105313.1-201ENST00000509121 353 ntBASIC0.07□□□□□ -2.4
RPL28P46779 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.07□□□□□ -2.4
RPL28P46779 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.07□□□□□ -2.4
RPL28P46779 MTATP6P24-201ENST00000576835 677 ntBASIC0.07□□□□□ -2.4
RPL28P46779 AC005828.6-201ENST00000606610 232 ntBASIC0.07□□□□□ -2.4
RPL28P46779 AC015726.2-201ENST00000620112 122 ntBASIC0.07□□□□□ -2.4
RPL28P46779 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
RPL28P46779 RNU6-254P-201ENST00000363377 107 ntBASIC0.06□□□□□ -2.4
RPL28P46779 Y_RNA.796-201ENST00000364268 102 ntBASIC0.06□□□□□ -2.4
RPL28P46779 Y_RNA.799-201ENST00000364992 102 ntBASIC0.06□□□□□ -2.4
RPL28P46779 SNORA72.3-201ENST00000365074 132 ntBASIC0.06□□□□□ -2.4
RPL28P46779 ELOCP21-201ENST00000412558 336 ntBASIC0.06□□□□□ -2.4
RPL28P46779 MTND1P11-201ENST00000456661 876 ntBASIC0.06□□□□□ -2.4
RPL28P46779 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.06□□□□□ -2.4
RPL28P46779 SNORA18.7-201ENST00000516910 131 ntBASIC0.06□□□□□ -2.4
RPL28P46779 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.06□□□□□ -2.4
RPL28P46779 AL591926.4-201ENST00000616895 298 ntBASIC0.06□□□□□ -2.4
RPL28P46779 AC091931.1-201ENST00000623488 728 ntBASIC0.06□□□□□ -2.4
RPL28P46779 U6.115-201ENST00000636045 103 ntBASIC0.06□□□□□ -2.4
RPL28P46779 AC099654.12-201ENST00000639868 649 ntBASIC0.06□□□□□ -2.4
RPL28P46779 SNORD44.1-201ENST00000363202 61 ntBASIC0.05□□□□□ -2.4
RPL28P46779 Y_RNA.168-201ENST00000363740 102 ntBASIC0.05□□□□□ -2.4
RPL28P46779 SNORA69-201ENST00000383895 132 ntBASIC0.05□□□□□ -2.4
RPL28P46779 Y_RNA.508-201ENST00000384502 114 ntBASIC0.05□□□□□ -2.4
RPL28P46779 RNU6-95P-201ENST00000384697 107 ntBASIC0.05□□□□□ -2.4
RPL28P46779 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.05□□□□□ -2.4
RPL28P46779 SNRPGP12-201ENST00000449481 213 ntBASIC0.05□□□□□ -2.4
RPL28P46779 SNORD123-201ENST00000459473 70 ntBASIC0.05□□□□□ -2.4
RPL28P46779 AC083904.1-201ENST00000487828 231 ntBASIC0.05□□□□□ -2.4
RPL28P46779 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.05□□□□□ -2.4
RPL28P46779 ACA59.1-201ENST00000515966 143 ntBASIC0.05□□□□□ -2.4
RPL28P46779 RNU6-1114P-201ENST00000516022 107 ntBASIC0.05□□□□□ -2.4
RPL28P46779 AF250324.2-201ENST00000608299 610 ntBASIC0.05□□□□□ -2.4
RPL28P46779 MIR410-201ENST00000362222 80 ntBASIC0.04□□□□□ -2.4
RPL28P46779 SNORD114-7-201ENST00000362520 77 ntBASIC0.04□□□□□ -2.4
RPL28P46779 Y_RNA.476-201ENST00000384347 108 ntBASIC0.04□□□□□ -2.4
RPL28P46779 MIR517A-201ENST00000385001 87 ntBASIC0.04□□□□□ -2.4
RPL28P46779 RNU6-648P-201ENST00000410190 107 ntBASIC0.04□□□□□ -2.4
RPL28P46779 RNA5SP95-201ENST00000410319 137 ntBASIC0.04□□□□□ -2.4
RPL28P46779 RN7SKP142-201ENST00000411236 328 ntBASIC0.04□□□□□ -2.4
RPL28P46779 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.04□□□□□ -2.4
RPL28P46779 RNU7-175P-201ENST00000515915 61 ntBASIC0.04□□□□□ -2.4
RPL28P46779 RNA5SP436-201ENST00000516020 115 ntBASIC0.04□□□□□ -2.4
RPL28P46779 RN7SKP287-201ENST00000516546 266 ntBASIC0.04□□□□□ -2.4
RPL28P46779 MTND2P38-201ENST00000522536 667 ntBASIC0.04□□□□□ -2.4
RPL28P46779 AC093027.1-201ENST00000546698 429 ntBASIC0.04□□□□□ -2.4
RPL28P46779 AC093023.1-201ENST00000547375 507 ntBASIC0.04□□□□□ -2.4
RPL28P46779 AC093424.1-201ENST00000604999 338 ntBASIC0.04□□□□□ -2.4
RPL28P46779 AL355073.2-201ENST00000612106 557 ntBASIC0.04□□□□□ -2.4
RPL28P46779 AC092634.7-201ENST00000621022 103 ntBASIC0.04□□□□□ -2.4
RPL28P46779 MIR4251-201ENST00000635819 61 ntBASIC0.04□□□□□ -2.4
RPL28P46779 Y_RNA.231-201ENST00000364358 102 ntBASIC0.03□□□□□ -2.4
RPL28P46779 Y_RNA.355-201ENST00000365462 98 ntBASIC0.03□□□□□ -2.4
RPL28P46779 RNU6-136P-201ENST00000384663 107 ntBASIC0.03□□□□□ -2.4
RPL28P46779 MIR518A1-201ENST00000385068 85 ntBASIC0.03□□□□□ -2.4
RPL28P46779 AL354751.2-201ENST00000415471 210 ntBASIC0.03□□□□□ -2.4
RPL28P46779 AC005534.2-201ENST00000431047 433 ntBASIC0.03□□□□□ -2.4
RPL28P46779 MTND3P23-201ENST00000431980 347 ntBASIC0.03□□□□□ -2.4
RPL28P46779 MTND4LP16-201ENST00000440828 295 ntBASIC0.03□□□□□ -2.4
RPL28P46779 SUMO1P2-201ENST00000452524 304 ntBASIC0.03□□□□□ -2.4
RPL28P46779 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.03□□□□□ -2.4
RPL28P46779 MIR2115-201ENST00000516657 100 ntBASIC0.03□□□□□ -2.4
RPL28P46779 RNU6-835P-201ENST00000516974 104 ntBASIC0.03□□□□□ -2.4
RPL28P46779 MIR3612-201ENST00000579753 87 ntBASIC0.03□□□□□ -2.4
RPL28P46779 RN7SL793P-201ENST00000583259 296 ntBASIC0.03□□□□□ -2.4
RPL28P46779 AC073648.5-201ENST00000603502 305 ntBASIC0.03□□□□□ -2.4
RPL28P46779 AL162730.1-201ENST00000605734 292 ntBASIC0.03□□□□□ -2.4
RPL28P46779 AC087752.4-201ENST00000605911 462 ntBASIC0.03□□□□□ -2.4
RPL28P46779 AC097520.1-201ENST00000624435 385 ntBASIC0.03□□□□□ -2.4
RPL28P46779 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.03□□□□□ -2.4
RPL28P46779 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.03□□□□□ -2.4
RPL28P46779 RNA5SP62-201ENST00000363457 110 ntBASIC0.02□□□□□ -2.41
RPL28P46779 RNU6-1322P-201ENST00000364309 107 ntBASIC0.02□□□□□ -2.41
RPL28P46779 Y_RNA.405-201ENST00000383979 100 ntBASIC0.02□□□□□ -2.41
RPL28P46779 SNORA75-201ENST00000384158 137 ntBASIC0.02□□□□□ -2.41
RPL28P46779 Y_RNA.451-201ENST00000384200 100 ntBASIC0.02□□□□□ -2.41
RPL28P46779 Y_RNA.524-201ENST00000384564 100 ntBASIC0.02□□□□□ -2.41
RPL28P46779 Y_RNA.561-201ENST00000384694 100 ntBASIC0.02□□□□□ -2.41
RPL28P46779 MIR520H-201ENST00000385126 88 ntBASIC0.02□□□□□ -2.41
RPL28P46779 RNU2-70P-201ENST00000410718 179 ntBASIC0.02□□□□□ -2.41
RPL28P46779 RNU6-1001P-201ENST00000411265 100 ntBASIC0.02□□□□□ -2.41
RPL28P46779 AL590632.1-201ENST00000424289 371 ntBASIC0.02□□□□□ -2.41
RPL28P46779 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.02□□□□□ -2.41
RPL28P46779 ELOCP24-201ENST00000456370 334 ntBASIC0.02□□□□□ -2.41
RPL28P46779 MTND3P7-201ENST00000474435 343 ntBASIC0.02□□□□□ -2.41
RPL28P46779 RNU6-63P-201ENST00000516690 95 ntBASIC0.02□□□□□ -2.41
RPL28P46779 AP003327.1-201ENST00000529684 127 ntBASIC0.02□□□□□ -2.41
RPL28P46779 AC022523.2-201ENST00000561045 150 ntBASIC0.02□□□□□ -2.41
RPL28P46779 MIR4514-201ENST00000581410 57 ntBASIC0.02□□□□□ -2.41
RPL28P46779 AC011712.1-201ENST00000588959 234 ntBASIC0.02□□□□□ -2.41
RPL28P46779 AC023932.2-201ENST00000603176 175 ntBASIC0.02□□□□□ -2.41
RPL28P46779 RNU6-89P-201ENST00000606519 100 ntBASIC0.02□□□□□ -2.41
RPL28P46779 AC078938.1-201ENST00000620993 318 ntBASIC0.02□□□□□ -2.41
RPL28P46779 RNU4-67P-201ENST00000364569 141 ntBASIC0.01□□□□□ -2.41
RPL28P46779 Y_RNA.296-201ENST00000364930 108 ntBASIC0.01□□□□□ -2.41
RPL28P46779 Y_RNA.393-201ENST00000383936 102 ntBASIC0.01□□□□□ -2.41
RPL28P46779 RNY1P4-201ENST00000384595 115 ntBASIC0.01□□□□□ -2.41
RPL28P46779 MIR193B-201ENST00000384907 83 ntBASIC0.01□□□□□ -2.41
RPL28P46779 MIR329-1-201ENST00000385028 80 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms