Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.32□□□□□ -2.04
MMP13P45452 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.32□□□□□ -2.04
MMP13P45452 SNORD116-25-201ENST00000516517 92 ntBASIC2.32□□□□□ -2.04
MMP13P45452 IGLV3-17-201ENST00000519099 244 ntBASIC2.32□□□□□ -2.04
MMP13P45452 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.32□□□□□ -2.04
MMP13P45452 AC025754.2-201ENST00000606491 432 ntBASIC2.32□□□□□ -2.04
MMP13P45452 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
MMP13P45452 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MMP13P45452 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.32□□□□□ -2.04
MMP13P45452 Y_RNA.24-201ENST00000362508 103 ntBASIC2.31□□□□□ -2.04
MMP13P45452 SNORA67.1-201ENST00000364749 141 ntBASIC2.31□□□□□ -2.04
MMP13P45452 Y_RNA.287-201ENST00000364853 94 ntBASIC2.31□□□□□ -2.04
MMP13P45452 Y_RNA.291-201ENST00000364886 113 ntBASIC2.31□□□□□ -2.04
MMP13P45452 Y_RNA.341-201ENST00000365341 102 ntBASIC2.31□□□□□ -2.04
MMP13P45452 MT-TT-201ENST00000387460 66 ntBASIC2.31□□□□□ -2.04
MMP13P45452 RNU6-1248P-201ENST00000391096 64 ntBASIC2.31□□□□□ -2.04
MMP13P45452 RNU4-53P-201ENST00000410828 140 ntBASIC2.31□□□□□ -2.04
MMP13P45452 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.31□□□□□ -2.04
MMP13P45452 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.31□□□□□ -2.04
MMP13P45452 AC090255.1-201ENST00000495779 349 ntBASIC2.31□□□□□ -2.04
MMP13P45452 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.31□□□□□ -2.04
MMP13P45452 RNU6-561P-201ENST00000516222 102 ntBASIC2.31□□□□□ -2.04
MMP13P45452 RNU5F-4P-201ENST00000516581 114 ntBASIC2.31□□□□□ -2.04
MMP13P45452 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.31□□□□□ -2.04
MMP13P45452 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.31□□□□□ -2.04
MMP13P45452 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
MMP13P45452 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.31□□□□□ -2.04
MMP13P45452 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.3□□□□□ -2.04
MMP13P45452 Y_RNA.23-201ENST00000362496 106 ntBASIC2.3□□□□□ -2.04
MMP13P45452 RNU6-312P-201ENST00000364629 107 ntBASIC2.3□□□□□ -2.04
MMP13P45452 RNA5SP125-201ENST00000364843 120 ntBASIC2.3□□□□□ -2.04
MMP13P45452 RNU6-275P-201ENST00000364910 107 ntBASIC2.3□□□□□ -2.04
MMP13P45452 U8.7-201ENST00000364940 136 ntBASIC2.3□□□□□ -2.04
MMP13P45452 SNORA20B-201ENST00000384220 132 ntBASIC2.3□□□□□ -2.04
MMP13P45452 MIR1283-1-201ENST00000408494 87 ntBASIC2.3□□□□□ -2.04
MMP13P45452 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.3□□□□□ -2.04
MMP13P45452 AL121890.1-201ENST00000435457 205 ntBASIC2.3□□□□□ -2.04
MMP13P45452 RPS20P10-201ENST00000451209 253 ntBASIC2.3□□□□□ -2.04
MMP13P45452 RNU7-14P-201ENST00000459331 62 ntBASIC2.3□□□□□ -2.04
MMP13P45452 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.3□□□□□ -2.04
MMP13P45452 U4atac.1-201ENST00000618345 95 ntBASIC2.3□□□□□ -2.04
MMP13P45452 MIR1248-201ENST00000629190 106 ntBASIC2.3□□□□□ -2.04
MMP13P45452 MIR3658-201ENST00000636291 56 ntBASIC2.3□□□□□ -2.04
MMP13P45452 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
MMP13P45452 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.29□□□□□ -2.04
MMP13P45452 Y_RNA.121-201ENST00000363309 113 ntBASIC2.29□□□□□ -2.04
MMP13P45452 RNY1P11-201ENST00000363759 113 ntBASIC2.29□□□□□ -2.04
MMP13P45452 Y_RNA.293-201ENST00000364908 93 ntBASIC2.29□□□□□ -2.04
MMP13P45452 RNU6-234P-201ENST00000365229 104 ntBASIC2.29□□□□□ -2.04
MMP13P45452 RNU6-969P-201ENST00000383900 105 ntBASIC2.29□□□□□ -2.04
MMP13P45452 Y_RNA.456-201ENST00000384232 111 ntBASIC2.29□□□□□ -2.04
MMP13P45452 RNU6-301P-201ENST00000384277 107 ntBASIC2.29□□□□□ -2.04
MMP13P45452 Y_RNA.568-201ENST00000384742 113 ntBASIC2.29□□□□□ -2.04
MMP13P45452 RNU6-578P-201ENST00000390980 103 ntBASIC2.29□□□□□ -2.04
MMP13P45452 AL355497.1-201ENST00000406262 551 ntBASIC2.29□□□□□ -2.04
MMP13P45452 RNU6-383P-201ENST00000410864 94 ntBASIC2.29□□□□□ -2.04
MMP13P45452 AC016909.1-201ENST00000415916 166 ntBASIC2.29□□□□□ -2.04
MMP13P45452 RPL23AP7-203ENST00000449021 469 ntBASIC2.29□□□□□ -2.04
MMP13P45452 AC245047.8-201ENST00000456455 284 ntBASIC2.29□□□□□ -2.04
MMP13P45452 SNORD65B-201ENST00000459126 73 ntBASIC2.29□□□□□ -2.04
MMP13P45452 RNU7-57P-201ENST00000459540 60 ntBASIC2.29□□□□□ -2.04
MMP13P45452 RNU6-426P-201ENST00000516464 97 ntBASIC2.29□□□□□ -2.04
MMP13P45452 RNU6-965P-201ENST00000516721 96 ntBASIC2.29□□□□□ -2.04
MMP13P45452 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.29□□□□□ -2.04
MMP13P45452 MIR5002-201ENST00000584713 97 ntBASIC2.29□□□□□ -2.04
MMP13P45452 AC245884.12-201ENST00000615364 59 ntBASIC2.29□□□□□ -2.04
MMP13P45452 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.29□□□□□ -2.04
MMP13P45452 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
MMP13P45452 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
MMP13P45452 Y_RNA.400-201ENST00000383963 111 ntBASIC2.28□□□□□ -2.04
MMP13P45452 MIR29B2-201ENST00000385055 81 ntBASIC2.28□□□□□ -2.04
MMP13P45452 MIR221-201ENST00000385135 110 ntBASIC2.28□□□□□ -2.04
MMP13P45452 MIR569-201ENST00000385228 96 ntBASIC2.28□□□□□ -2.04
MMP13P45452 MIR524-201ENST00000385242 87 ntBASIC2.28□□□□□ -2.04
MMP13P45452 MIR1278-201ENST00000408753 81 ntBASIC2.28□□□□□ -2.04
MMP13P45452 RNA5SP338-201ENST00000410495 85 ntBASIC2.28□□□□□ -2.04
MMP13P45452 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.28□□□□□ -2.04
MMP13P45452 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.28□□□□□ -2.04
MMP13P45452 RNU6-1337P-201ENST00000516525 95 ntBASIC2.28□□□□□ -2.04
MMP13P45452 RNU7-121P-201ENST00000516604 62 ntBASIC2.28□□□□□ -2.04
MMP13P45452 RNU6-63P-201ENST00000516690 95 ntBASIC2.28□□□□□ -2.04
MMP13P45452 MIR4744-201ENST00000581563 82 ntBASIC2.28□□□□□ -2.04
MMP13P45452 AL670379.2-201ENST00000604983 252 ntBASIC2.28□□□□□ -2.04
MMP13P45452 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.28□□□□□ -2.04
MMP13P45452 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
MMP13P45452 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
MMP13P45452 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
MMP13P45452 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.27□□□□□ -2.05
MMP13P45452 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
MMP13P45452 RNU6-899P-201ENST00000363947 107 ntBASIC2.27□□□□□ -2.05
MMP13P45452 RNU6-151P-201ENST00000364158 107 ntBASIC2.27□□□□□ -2.05
MMP13P45452 Y_RNA.215-201ENST00000364204 112 ntBASIC2.27□□□□□ -2.05
MMP13P45452 RNU1-91P-201ENST00000364746 163 ntBASIC2.27□□□□□ -2.05
MMP13P45452 RNU6-449P-201ENST00000383914 107 ntBASIC2.27□□□□□ -2.05
MMP13P45452 RNU6-418P-201ENST00000384035 107 ntBASIC2.27□□□□□ -2.05
MMP13P45452 RNU6-975P-201ENST00000384296 105 ntBASIC2.27□□□□□ -2.05
MMP13P45452 SNORA8.3-201ENST00000384679 139 ntBASIC2.27□□□□□ -2.05
MMP13P45452 RNU2-63P-201ENST00000410792 194 ntBASIC2.27□□□□□ -2.05
MMP13P45452 AL162725.1-201ENST00000435405 301 ntBASIC2.27□□□□□ -2.05
MMP13P45452 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms