Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RNU1-139P-201ENST00000391307 165 ntBASIC0.85□□□□□ -2.27
TNFSF9P41273 MIR190B-201ENST00000401119 79 ntBASIC0.85□□□□□ -2.27
TNFSF9P41273 MRPL42P3-201ENST00000401492 326 ntBASIC0.85□□□□□ -2.27
TNFSF9P41273 Y_RNA.646-201ENST00000410980 101 ntBASIC0.85□□□□□ -2.27
TNFSF9P41273 MRPS18CP6-201ENST00000423587 223 ntBASIC0.85□□□□□ -2.27
TNFSF9P41273 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.85□□□□□ -2.27
TNFSF9P41273 USP9YP16-201ENST00000430287 407 ntBASIC0.85□□□□□ -2.27
TNFSF9P41273 USP9YP23-201ENST00000455085 407 ntBASIC0.85□□□□□ -2.27
TNFSF9P41273 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.85□□□□□ -2.27
TNFSF9P41273 AC010469.2-201ENST00000496412 480 ntBASIC0.85□□□□□ -2.27
TNFSF9P41273 SNORA31.2-201ENST00000516019 134 ntBASIC0.85□□□□□ -2.27
TNFSF9P41273 RNU6-63P-201ENST00000516690 95 ntBASIC0.85□□□□□ -2.27
TNFSF9P41273 AL020996.3-201ENST00000606617 222 ntBASIC0.85□□□□□ -2.27
TNFSF9P41273 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.85□□□□□ -2.27
TNFSF9P41273 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.85□□□□□ -2.27
TNFSF9P41273 AC087588.2-201ENST00000617667 426 ntBASIC0.85□□□□□ -2.27
TNFSF9P41273 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.85□□□□□ -2.27
TNFSF9P41273 RNU6-845P-201ENST00000362578 103 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 SNORD114-26-201ENST00000363543 72 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 U3.8-201ENST00000363675 217 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 RNU6-961P-201ENST00000363893 105 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.84□□□□□ -2.27
TNFSF9P41273 RNU6-1013P-201ENST00000384180 107 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 SNORA20B-201ENST00000384220 132 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 Y_RNA.474-201ENST00000384341 102 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 RNU6-136P-201ENST00000384663 107 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 RNU6-876P-201ENST00000391295 104 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
TNFSF9P41273 AL034345.1-201ENST00000407768 123 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 AC074085.1-201ENST00000413598 418 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 AC092423.1-201ENST00000430165 186 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 MTND1P2-201ENST00000430604 821 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.84□□□□□ -2.27
TNFSF9P41273 CHEK2P4-201ENST00000450340 246 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 MTCO3P10-201ENST00000455912 772 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 AC105758.1-201ENST00000506038 399 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 AC046134.1-201ENST00000514454 666 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 RNU6-1114P-201ENST00000516022 107 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 RNU6-947P-201ENST00000516264 106 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 AC022868.1-201ENST00000517767 391 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 APOOP3-201ENST00000536787 586 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.84□□□□□ -2.27
TNFSF9P41273 MIR4778-201ENST00000577635 80 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 AC011712.1-201ENST00000588959 234 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 AC108706.1-201ENST00000611053 297 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 AL669831.3-213ENST00000636676 183 ntBASIC0.84□□□□□ -2.27
TNFSF9P41273 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
TNFSF9P41273 AC005592.1-201ENST00000566527 1640 ntBASIC0.83□□□□□ -2.28
TNFSF9P41273 AL391516.1-201ENST00000554380 2449 ntBASIC0.83□□□□□ -2.28
TNFSF9P41273 Y_RNA.172-201ENST00000363765 102 ntBASIC0.83□□□□□ -2.28
TNFSF9P41273 RNU1-133P-201ENST00000364867 167 ntBASIC0.83□□□□□ -2.28
TNFSF9P41273 RNU6-1283P-201ENST00000365314 105 ntBASIC0.83□□□□□ -2.28
TNFSF9P41273 RNU6-505P-201ENST00000384427 107 ntBASIC0.83□□□□□ -2.28
TNFSF9P41273 Y_RNA.505-201ENST00000384489 102 ntBASIC0.83□□□□□ -2.28
TNFSF9P41273 RNU6-310P-201ENST00000384655 107 ntBASIC0.83□□□□□ -2.28
TNFSF9P41273 RNU6-1105P-201ENST00000384774 107 ntBASIC0.83□□□□□ -2.28
TNFSF9P41273 RAB28P5-201ENST00000427490 651 ntBASIC0.83□□□□□ -2.28
TNFSF9P41273 AC093850.1-201ENST00000454121 251 ntBASIC0.83□□□□□ -2.28
TNFSF9P41273 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.83□□□□□ -2.28
TNFSF9P41273 AC048334.1-201ENST00000477975 159 ntBASIC0.83□□□□□ -2.28
TNFSF9P41273 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.83□□□□□ -2.28
TNFSF9P41273 SNORA31.4-201ENST00000516049 129 ntBASIC0.83□□□□□ -2.28
TNFSF9P41273 Y_RNA.683-201ENST00000516508 93 ntBASIC0.83□□□□□ -2.28
TNFSF9P41273 Y_RNA.706-201ENST00000516933 99 ntBASIC0.83□□□□□ -2.28
TNFSF9P41273 RNU6-1116P-201ENST00000517269 99 ntBASIC0.83□□□□□ -2.28
TNFSF9P41273 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.83□□□□□ -2.28
TNFSF9P41273 MIR4714-201ENST00000580728 77 ntBASIC0.83□□□□□ -2.28
TNFSF9P41273 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.83□□□□□ -2.28
TNFSF9P41273 MIR4438-201ENST00000585271 93 ntBASIC0.83□□□□□ -2.28
TNFSF9P41273 AC084781.2-201ENST00000615568 161 ntBASIC0.83□□□□□ -2.28
TNFSF9P41273 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.83□□□□□ -2.28
TNFSF9P41273 Y_RNA.36-201ENST00000362602 112 ntBASIC0.82□□□□□ -2.28
TNFSF9P41273 RNU6-1266P-201ENST00000362794 105 ntBASIC0.82□□□□□ -2.28
TNFSF9P41273 RNU6-879P-201ENST00000364328 108 ntBASIC0.82□□□□□ -2.28
TNFSF9P41273 RNU4-76P-201ENST00000364509 141 ntBASIC0.82□□□□□ -2.28
TNFSF9P41273 RNU6-926P-201ENST00000384075 107 ntBASIC0.82□□□□□ -2.28
TNFSF9P41273 RNU6-767P-201ENST00000384132 107 ntBASIC0.82□□□□□ -2.28
TNFSF9P41273 RNU6-510P-201ENST00000391239 108 ntBASIC0.82□□□□□ -2.28
TNFSF9P41273 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.82□□□□□ -2.28
TNFSF9P41273 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.82□□□□□ -2.28
TNFSF9P41273 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.82□□□□□ -2.28
TNFSF9P41273 AC096644.2-201ENST00000429278 159 ntBASIC0.82□□□□□ -2.28
TNFSF9P41273 CALM2P4-201ENST00000430810 426 ntBASIC0.82□□□□□ -2.28
TNFSF9P41273 RPEP5-201ENST00000441137 268 ntBASIC0.82□□□□□ -2.28
TNFSF9P41273 AC091021.1-201ENST00000468051 388 ntBASIC0.82□□□□□ -2.28
TNFSF9P41273 RPS27P22-201ENST00000478056 241 ntBASIC0.82□□□□□ -2.28
TNFSF9P41273 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
TNFSF9P41273 Y_RNA.708-201ENST00000516950 96 ntBASIC0.82□□□□□ -2.28
TNFSF9P41273 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.82□□□□□ -2.28
TNFSF9P41273 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.82□□□□□ -2.28
TNFSF9P41273 AC090617.3-201ENST00000573670 475 ntBASIC0.82□□□□□ -2.28
TNFSF9P41273 MIR4661-201ENST00000582720 75 ntBASIC0.82□□□□□ -2.28
TNFSF9P41273 AL513534.2-201ENST00000603836 250 ntBASIC0.82□□□□□ -2.28
TNFSF9P41273 AC100812.1-201ENST00000607622 580 ntBASIC0.82□□□□□ -2.28
TNFSF9P41273 AC073349.3-201ENST00000617616 186 ntBASIC0.82□□□□□ -2.28
TNFSF9P41273 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TNFSF9P41273 RNU6-1301P-201ENST00000362724 104 ntBASIC0.81□□□□□ -2.28
TNFSF9P41273 RNU4-79P-201ENST00000362764 141 ntBASIC0.81□□□□□ -2.28
TNFSF9P41273 RNU6-280P-201ENST00000364145 104 ntBASIC0.81□□□□□ -2.28
TNFSF9P41273 RNU6-1187P-201ENST00000364771 110 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms