Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RPS29P30-201ENST00000600975 111 ntBASIC1.63□□□□□ -2.15
HADHAP40939 AC021506.2-201ENST00000612354 169 ntBASIC1.63□□□□□ -2.15
HADHAP40939 AL513423.1-201ENST00000621695 132 ntBASIC1.63□□□□□ -2.15
HADHAP40939 MIR8063-201ENST00000621930 81 ntBASIC1.63□□□□□ -2.15
HADHAP40939 AC095038.3-201ENST00000634439 195 ntBASIC1.63□□□□□ -2.15
HADHAP40939 Y_RNA.5-201ENST00000362334 102 ntBASIC1.62□□□□□ -2.15
HADHAP40939 RNU6-20P-201ENST00000384106 107 ntBASIC1.62□□□□□ -2.15
HADHAP40939 Y_RNA.496-201ENST00000384444 101 ntBASIC1.62□□□□□ -2.15
HADHAP40939 RNU6-1065P-201ENST00000384513 106 ntBASIC1.62□□□□□ -2.15
HADHAP40939 Y_RNA.579-201ENST00000390939 94 ntBASIC1.62□□□□□ -2.15
HADHAP40939 RN7SKP101-201ENST00000411376 320 ntBASIC1.62□□□□□ -2.15
HADHAP40939 AC108667.1-201ENST00000428618 249 ntBASIC1.62□□□□□ -2.15
HADHAP40939 AL160004.2-201ENST00000432935 350 ntBASIC1.62□□□□□ -2.15
HADHAP40939 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.62□□□□□ -2.15
HADHAP40939 SNORD13-201ENST00000459299 104 ntBASIC1.62□□□□□ -2.15
HADHAP40939 AC099513.1-201ENST00000490423 301 ntBASIC1.62□□□□□ -2.15
HADHAP40939 RNU6-902P-201ENST00000517212 91 ntBASIC1.62□□□□□ -2.15
HADHAP40939 AP002004.2-201ENST00000531656 154 ntBASIC1.62□□□□□ -2.15
HADHAP40939 AC091178.2-201ENST00000584401 117 ntBASIC1.62□□□□□ -2.15
HADHAP40939 AL121655.1-201ENST00000605811 308 ntBASIC1.62□□□□□ -2.15
HADHAP40939 Y_RNA.772-201ENST00000606692 102 ntBASIC1.62□□□□□ -2.15
HADHAP40939 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.62□□□□□ -2.15
HADHAP40939 RNU6-117P-201ENST00000365415 107 ntBASIC1.61□□□□□ -2.15
HADHAP40939 Y_RNA.395-201ENST00000383945 109 ntBASIC1.61□□□□□ -2.15
HADHAP40939 Y_RNA.462-201ENST00000384268 102 ntBASIC1.61□□□□□ -2.15
HADHAP40939 RPL30P13-201ENST00000418873 348 ntBASIC1.61□□□□□ -2.15
HADHAP40939 AC096644.2-201ENST00000429278 159 ntBASIC1.61□□□□□ -2.15
HADHAP40939 AC027119.1-201ENST00000440877 241 ntBASIC1.61□□□□□ -2.15
HADHAP40939 CHEK2P4-201ENST00000450340 246 ntBASIC1.61□□□□□ -2.15
HADHAP40939 RNU4-77P-201ENST00000516692 156 ntBASIC1.61□□□□□ -2.15
HADHAP40939 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.61□□□□□ -2.15
HADHAP40939 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.61□□□□□ -2.15
HADHAP40939 AL080274.1-201ENST00000605565 220 ntBASIC1.61□□□□□ -2.15
HADHAP40939 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.61□□□□□ -2.15
HADHAP40939 AC073349.3-201ENST00000617616 186 ntBASIC1.61□□□□□ -2.15
HADHAP40939 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HADHAP40939 MIR513A1-201ENST00000385138 129 ntBASIC1.6□□□□□ -2.15
HADHAP40939 RNU5A-5P-201ENST00000411054 116 ntBASIC1.6□□□□□ -2.15
HADHAP40939 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.6□□□□□ -2.15
HADHAP40939 RNU2-56P-201ENST00000516826 190 ntBASIC1.6□□□□□ -2.15
HADHAP40939 RN7SKP295-201ENST00000517264 153 ntBASIC1.6□□□□□ -2.15
HADHAP40939 MIR4498-201ENST00000577599 66 ntBASIC1.6□□□□□ -2.15
HADHAP40939 MIR5188-201ENST00000583467 113 ntBASIC1.6□□□□□ -2.15
HADHAP40939 AC022441.3-201ENST00000605737 136 ntBASIC1.6□□□□□ -2.15
HADHAP40939 AC040896.1-201ENST00000613819 479 ntBASIC1.6□□□□□ -2.15
HADHAP40939 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
HADHAP40939 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.59□□□□□ -2.15
HADHAP40939 AL031003.1-201ENST00000404229 172 ntBASIC1.59□□□□□ -2.15
HADHAP40939 AC091021.1-201ENST00000468051 388 ntBASIC1.59□□□□□ -2.15
HADHAP40939 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.59□□□□□ -2.15
HADHAP40939 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
HADHAP40939 AL121890.5-201ENST00000620848 304 ntBASIC1.59□□□□□ -2.15
HADHAP40939 MIR378A-201ENST00000362177 66 ntBASIC1.58□□□□□ -2.16
HADHAP40939 Y_RNA.101-201ENST00000363154 102 ntBASIC1.58□□□□□ -2.16
HADHAP40939 Y_RNA.124-201ENST00000363339 93 ntBASIC1.58□□□□□ -2.16
HADHAP40939 RNU6-457P-201ENST00000363999 107 ntBASIC1.58□□□□□ -2.16
HADHAP40939 RNU4-50P-201ENST00000364361 141 ntBASIC1.58□□□□□ -2.16
HADHAP40939 Y_RNA.265-201ENST00000364677 108 ntBASIC1.58□□□□□ -2.16
HADHAP40939 Y_RNA.338-201ENST00000365320 114 ntBASIC1.58□□□□□ -2.16
HADHAP40939 Y_RNA.446-201ENST00000384178 104 ntBASIC1.58□□□□□ -2.16
HADHAP40939 SNORA17.3-201ENST00000391159 129 ntBASIC1.58□□□□□ -2.16
HADHAP40939 RNA5SP482-201ENST00000391269 118 ntBASIC1.58□□□□□ -2.16
HADHAP40939 SNX2P2-201ENST00000424553 323 ntBASIC1.58□□□□□ -2.16
HADHAP40939 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
HADHAP40939 Y_RNA.639-201ENST00000458981 102 ntBASIC1.58□□□□□ -2.16
HADHAP40939 RNU1-98P-201ENST00000458992 160 ntBASIC1.58□□□□□ -2.16
HADHAP40939 AC108729.3-201ENST00000513484 108 ntBASIC1.58□□□□□ -2.16
HADHAP40939 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HADHAP40939 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.58□□□□□ -2.16
HADHAP40939 AC055872.1-201ENST00000570978 278 ntBASIC1.58□□□□□ -2.16
HADHAP40939 MIR3937-201ENST00000580135 106 ntBASIC1.58□□□□□ -2.16
HADHAP40939 PRR13P7-201ENST00000605538 430 ntBASIC1.58□□□□□ -2.16
HADHAP40939 BX248123.2-201ENST00000606318 124 ntBASIC1.58□□□□□ -2.16
HADHAP40939 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
HADHAP40939 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HADHAP40939 RNU5E-4P-201ENST00000364931 120 ntBASIC1.57□□□□□ -2.16
HADHAP40939 RNU6-867P-201ENST00000364956 107 ntBASIC1.57□□□□□ -2.16
HADHAP40939 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.57□□□□□ -2.16
HADHAP40939 RNU6-708P-201ENST00000384217 107 ntBASIC1.57□□□□□ -2.16
HADHAP40939 RNU6-505P-201ENST00000384427 107 ntBASIC1.57□□□□□ -2.16
HADHAP40939 Y_RNA.509-201ENST00000384506 99 ntBASIC1.57□□□□□ -2.16
HADHAP40939 RNU6-710P-201ENST00000410424 105 ntBASIC1.57□□□□□ -2.16
HADHAP40939 RNU2-61P-201ENST00000411069 191 ntBASIC1.57□□□□□ -2.16
HADHAP40939 RPL23AP36-201ENST00000413895 458 ntBASIC1.57□□□□□ -2.16
HADHAP40939 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.57□□□□□ -2.16
HADHAP40939 AC005042.3-201ENST00000453230 174 ntBASIC1.57□□□□□ -2.16
HADHAP40939 RPS29P23-201ENST00000458635 123 ntBASIC1.57□□□□□ -2.16
HADHAP40939 U8.20-201ENST00000459445 131 ntBASIC1.57□□□□□ -2.16
HADHAP40939 RNU6-155P-201ENST00000516347 100 ntBASIC1.57□□□□□ -2.16
HADHAP40939 MIR4423-201ENST00000580922 80 ntBASIC1.57□□□□□ -2.16
HADHAP40939 C8orf59P2-201ENST00000603441 271 ntBASIC1.57□□□□□ -2.16
HADHAP40939 AL021879.1-201ENST00000611756 288 ntBASIC1.57□□□□□ -2.16
HADHAP40939 AC011476.5-201ENST00000615594 130 ntBASIC1.57□□□□□ -2.16
HADHAP40939 AC104985.2-201ENST00000620598 500 ntBASIC1.57□□□□□ -2.16
HADHAP40939 AC090971.5-201ENST00000621102 293 ntBASIC1.57□□□□□ -2.16
HADHAP40939 AL161722.3-201ENST00000605789 2983 ntBASIC1.56□□□□□ -2.16
HADHAP40939 Y_RNA.267-201ENST00000364679 109 ntBASIC1.56□□□□□ -2.16
HADHAP40939 RNY1P14-201ENST00000384426 108 ntBASIC1.56□□□□□ -2.16
HADHAP40939 Y_RNA.570-201ENST00000384750 101 ntBASIC1.56□□□□□ -2.16
HADHAP40939 MIR517C-201ENST00000385103 95 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms