Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 MIR3664-201ENST00000579074 99 ntBASIC1.05□□□□□ -2.24
RFC4P35249 AL022345.2-201ENST00000606307 135 ntBASIC1.05□□□□□ -2.24
RFC4P35249 SNORD3E-202ENST00000627253 216 ntBASIC1.05□□□□□ -2.24
RFC4P35249 AC068647.2-201ENST00000637380 353 ntBASIC1.05□□□□□ -2.24
RFC4P35249 RNU6-407P-201ENST00000365280 104 ntBASIC1.04□□□□□ -2.24
RFC4P35249 Y_RNA.358-201ENST00000365491 99 ntBASIC1.04□□□□□ -2.24
RFC4P35249 RNU6-1145P-201ENST00000384246 107 ntBASIC1.04□□□□□ -2.24
RFC4P35249 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
RFC4P35249 AL034345.1-201ENST00000407768 123 ntBASIC1.04□□□□□ -2.24
RFC4P35249 FCF1P9-201ENST00000412546 282 ntBASIC1.04□□□□□ -2.24
RFC4P35249 AC092423.1-201ENST00000430165 186 ntBASIC1.04□□□□□ -2.24
RFC4P35249 DYNLT3P2-201ENST00000442517 295 ntBASIC1.04□□□□□ -2.24
RFC4P35249 AC107399.1-201ENST00000451226 265 ntBASIC1.04□□□□□ -2.24
RFC4P35249 Y_RNA.708-201ENST00000516950 96 ntBASIC1.04□□□□□ -2.24
RFC4P35249 RNU7-172P-201ENST00000517125 64 ntBASIC1.04□□□□□ -2.24
RFC4P35249 AC022868.1-201ENST00000517767 391 ntBASIC1.04□□□□□ -2.24
RFC4P35249 AC105029.1-201ENST00000520250 669 ntBASIC1.04□□□□□ -2.24
RFC4P35249 MIR4778-201ENST00000577635 80 ntBASIC1.04□□□□□ -2.24
RFC4P35249 AC068137.4-201ENST00000638485 296 ntBASIC1.04□□□□□ -2.24
RFC4P35249 Y_RNA.30-201ENST00000362572 97 ntBASIC1.03□□□□□ -2.24
RFC4P35249 Y_RNA.88-201ENST00000363029 99 ntBASIC1.03□□□□□ -2.24
RFC4P35249 MTCYBP10-201ENST00000424905 650 ntBASIC1.03□□□□□ -2.24
RFC4P35249 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.03□□□□□ -2.24
RFC4P35249 AC097462.1-201ENST00000514125 324 ntBASIC1.03□□□□□ -2.24
RFC4P35249 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.03□□□□□ -2.24
RFC4P35249 RNU6-358P-201ENST00000516564 75 ntBASIC1.03□□□□□ -2.24
RFC4P35249 AC060780.3-201ENST00000589464 80 ntBASIC1.03□□□□□ -2.24
RFC4P35249 AL590095.2-201ENST00000604136 117 ntBASIC1.03□□□□□ -2.24
RFC4P35249 AC103810.9-201ENST00000606688 112 ntBASIC1.03□□□□□ -2.24
RFC4P35249 AC007742.2-201ENST00000618226 398 ntBASIC1.03□□□□□ -2.24
RFC4P35249 MIR6079-201ENST00000635807 62 ntBASIC1.03□□□□□ -2.24
RFC4P35249 AC073544.1-201ENST00000600110 1595 ntBASIC1.03□□□□□ -2.24
RFC4P35249 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.02□□□□□ -2.25
RFC4P35249 Y_RNA.267-201ENST00000364679 109 ntBASIC1.02□□□□□ -2.25
RFC4P35249 Y_RNA.498-201ENST00000384460 102 ntBASIC1.02□□□□□ -2.25
RFC4P35249 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.02□□□□□ -2.25
RFC4P35249 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.02□□□□□ -2.25
RFC4P35249 PCNPP5-201ENST00000452246 481 ntBASIC1.02□□□□□ -2.25
RFC4P35249 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.02□□□□□ -2.25
RFC4P35249 AC091021.1-201ENST00000468051 388 ntBASIC1.02□□□□□ -2.25
RFC4P35249 SCARNA16.2-201ENST00000516520 172 ntBASIC1.02□□□□□ -2.25
RFC4P35249 RNU7-30P-201ENST00000516835 62 ntBASIC1.02□□□□□ -2.25
RFC4P35249 RNU6-1213P-201ENST00000517075 94 ntBASIC1.02□□□□□ -2.25
RFC4P35249 RNU6-165P-201ENST00000517170 99 ntBASIC1.02□□□□□ -2.25
RFC4P35249 CYCSP23-201ENST00000519781 313 ntBASIC1.02□□□□□ -2.25
RFC4P35249 AP002001.1-203ENST00000534002 267 ntBASIC1.02□□□□□ -2.25
RFC4P35249 MIR4661-201ENST00000582720 75 ntBASIC1.02□□□□□ -2.25
RFC4P35249 MIR1244-1-201ENST00000612829 85 ntBASIC1.02□□□□□ -2.25
RFC4P35249 AC104260.1-201ENST00000616660 539 ntBASIC1.02□□□□□ -2.25
RFC4P35249 PISRT1.1-201ENST00000616930 107 ntBASIC1.02□□□□□ -2.25
RFC4P35249 AC073349.3-201ENST00000617616 186 ntBASIC1.02□□□□□ -2.25
RFC4P35249 MIR6835-201ENST00000621552 64 ntBASIC1.02□□□□□ -2.25
RFC4P35249 AC027335.2-201ENST00000624030 375 ntBASIC1.02□□□□□ -2.25
RFC4P35249 AC139792.2-201ENST00000624218 587 ntBASIC1.02□□□□□ -2.25
RFC4P35249 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.02□□□□□ -2.25
RFC4P35249 MIR1244-3-201ENST00000635744 85 ntBASIC1.02□□□□□ -2.25
RFC4P35249 MIR1244-2-201ENST00000636449 85 ntBASIC1.02□□□□□ -2.25
RFC4P35249 MIR1244-4-202ENST00000636813 85 ntBASIC1.02□□□□□ -2.25
RFC4P35249 RNU6-593P-201ENST00000364716 112 ntBASIC1.01□□□□□ -2.25
RFC4P35249 RNU6-1264P-201ENST00000383891 107 ntBASIC1.01□□□□□ -2.25
RFC4P35249 Y_RNA.482-201ENST00000384377 111 ntBASIC1.01□□□□□ -2.25
RFC4P35249 MIR936-201ENST00000401264 98 ntBASIC1.01□□□□□ -2.25
RFC4P35249 CALM2P4-201ENST00000430810 426 ntBASIC1.01□□□□□ -2.25
RFC4P35249 RPL23AP50-201ENST00000434149 455 ntBASIC1.01□□□□□ -2.25
RFC4P35249 RNU7-94P-201ENST00000459576 63 ntBASIC1.01□□□□□ -2.25
RFC4P35249 RPL39P38-201ENST00000467018 153 ntBASIC1.01□□□□□ -2.25
RFC4P35249 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.01□□□□□ -2.25
RFC4P35249 RNA5SP20-201ENST00000515976 84 ntBASIC1.01□□□□□ -2.25
RFC4P35249 RNU6-120P-201ENST00000516077 103 ntBASIC1.01□□□□□ -2.25
RFC4P35249 RNU6-922P-201ENST00000516753 99 ntBASIC1.01□□□□□ -2.25
RFC4P35249 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.01□□□□□ -2.25
RFC4P35249 AC018448.1-201ENST00000552843 316 ntBASIC1.01□□□□□ -2.25
RFC4P35249 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.01□□□□□ -2.25
RFC4P35249 AC092794.2-201ENST00000620933 563 ntBASIC1.01□□□□□ -2.25
RFC4P35249 AC006435.5-201ENST00000624486 112 ntBASIC1.01□□□□□ -2.25
RFC4P35249 AC008133.2-201ENST00000624540 351 ntBASIC1.01□□□□□ -2.25
RFC4P35249 AL442644.1-201ENST00000454390 3105 ntBASIC1.01□□□□□ -2.25
RFC4P35249 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
RFC4P35249 RNU6-454P-201ENST00000364292 107 ntBASIC1□□□□□ -2.25
RFC4P35249 Y_RNA.265-201ENST00000364677 108 ntBASIC1□□□□□ -2.25
RFC4P35249 RNU6-1187P-201ENST00000364771 110 ntBASIC1□□□□□ -2.25
RFC4P35249 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
RFC4P35249 RNU6-318P-201ENST00000384283 103 ntBASIC1□□□□□ -2.25
RFC4P35249 RNU6-505P-201ENST00000384427 107 ntBASIC1□□□□□ -2.25
RFC4P35249 RNU6-136P-201ENST00000384663 107 ntBASIC1□□□□□ -2.25
RFC4P35249 SNORA75.4-201ENST00000391278 119 ntBASIC1□□□□□ -2.25
RFC4P35249 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
RFC4P35249 RNU4-14P-201ENST00000410858 122 ntBASIC1□□□□□ -2.25
RFC4P35249 MTCO3P19-201ENST00000415864 321 ntBASIC1□□□□□ -2.25
RFC4P35249 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1□□□□□ -2.25
RFC4P35249 AC018865.2-201ENST00000423631 129 ntBASIC1□□□□□ -2.25
RFC4P35249 AC093850.1-201ENST00000454121 251 ntBASIC1□□□□□ -2.25
RFC4P35249 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1□□□□□ -2.25
RFC4P35249 MTND4P17-201ENST00000470444 350 ntBASIC1□□□□□ -2.25
RFC4P35249 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1□□□□□ -2.25
RFC4P35249 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1□□□□□ -2.25
RFC4P35249 RNA5SP168-201ENST00000516642 112 ntBASIC1□□□□□ -2.25
RFC4P35249 RPL21P9-201ENST00000556149 474 ntBASIC1□□□□□ -2.25
RFC4P35249 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1□□□□□ -2.25
RFC4P35249 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms