Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 RPS29P21-201ENST00000496272 170 ntBASIC2.47□□□□□ -2.01
SMARCA1P28370 RNU6-1041P-201ENST00000516254 102 ntBASIC2.47□□□□□ -2.01
SMARCA1P28370 MIR514B-201ENST00000516774 80 ntBASIC2.47□□□□□ -2.01
SMARCA1P28370 AC078899.2-201ENST00000595282 212 ntBASIC2.47□□□□□ -2.01
SMARCA1P28370 BX284668.6-201ENST00000606899 438 ntBASIC2.47□□□□□ -2.01
SMARCA1P28370 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.47□□□□□ -2.01
SMARCA1P28370 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.47□□□□□ -2.01
SMARCA1P28370 AL596028.1-201ENST00000326971 197 ntBASIC2.46□□□□□ -2.02
SMARCA1P28370 MIRLET7G-201ENST00000362280 84 ntBASIC2.46□□□□□ -2.02
SMARCA1P28370 Y_RNA.65-201ENST00000362846 100 ntBASIC2.46□□□□□ -2.02
SMARCA1P28370 RNU6-801P-201ENST00000364087 105 ntBASIC2.46□□□□□ -2.02
SMARCA1P28370 Y_RNA.269-201ENST00000364685 89 ntBASIC2.46□□□□□ -2.02
SMARCA1P28370 Y_RNA.287-201ENST00000364853 94 ntBASIC2.46□□□□□ -2.02
SMARCA1P28370 RNU6-407P-201ENST00000365280 104 ntBASIC2.46□□□□□ -2.02
SMARCA1P28370 RNU6-1289P-201ENST00000384431 106 ntBASIC2.46□□□□□ -2.02
SMARCA1P28370 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.46□□□□□ -2.02
SMARCA1P28370 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.46□□□□□ -2.02
SMARCA1P28370 AC108059.2-201ENST00000434626 151 ntBASIC2.46□□□□□ -2.02
SMARCA1P28370 HMGN2P34-201ENST00000437647 269 ntBASIC2.46□□□□□ -2.02
SMARCA1P28370 RNA5SP20-201ENST00000515976 84 ntBASIC2.46□□□□□ -2.02
SMARCA1P28370 MIR3169-201ENST00000578032 83 ntBASIC2.46□□□□□ -2.02
SMARCA1P28370 MIR4524B-201ENST00000581569 115 ntBASIC2.46□□□□□ -2.02
SMARCA1P28370 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.46□□□□□ -2.02
SMARCA1P28370 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SMARCA1P28370 MIR504-201ENST00000385065 83 ntBASIC2.45□□□□□ -2.02
SMARCA1P28370 AC024067.1-201ENST00000426199 223 ntBASIC2.45□□□□□ -2.02
SMARCA1P28370 Y_RNA.637-201ENST00000459424 114 ntBASIC2.45□□□□□ -2.02
SMARCA1P28370 RPS26P55-201ENST00000471178 356 ntBASIC2.45□□□□□ -2.02
SMARCA1P28370 SNORA70.12-201ENST00000516084 153 ntBASIC2.45□□□□□ -2.02
SMARCA1P28370 RNU2-19P-201ENST00000517288 84 ntBASIC2.45□□□□□ -2.02
SMARCA1P28370 SUMO2P18-201ENST00000518873 252 ntBASIC2.45□□□□□ -2.02
SMARCA1P28370 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.45□□□□□ -2.02
SMARCA1P28370 snoU18.1-201ENST00000629629 71 ntBASIC2.45□□□□□ -2.02
SMARCA1P28370 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
SMARCA1P28370 AC005336.3-201ENST00000623833 2679 ntBASIC2.45□□□□□ -2.02
SMARCA1P28370 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.45□□□□□ -2.02
SMARCA1P28370 Y_RNA.122-201ENST00000363331 96 ntBASIC2.44□□□□□ -2.02
SMARCA1P28370 RNU6-271P-201ENST00000363858 105 ntBASIC2.44□□□□□ -2.02
SMARCA1P28370 Y_RNA.310-201ENST00000365063 113 ntBASIC2.44□□□□□ -2.02
SMARCA1P28370 SNORA64-201ENST00000384674 134 ntBASIC2.44□□□□□ -2.02
SMARCA1P28370 RNU6-1248P-201ENST00000391096 64 ntBASIC2.44□□□□□ -2.02
SMARCA1P28370 AL117342.1-201ENST00000404861 406 ntBASIC2.44□□□□□ -2.02
SMARCA1P28370 RNU6-855P-201ENST00000410395 104 ntBASIC2.44□□□□□ -2.02
SMARCA1P28370 BX510359.4-201ENST00000423750 193 ntBASIC2.44□□□□□ -2.02
SMARCA1P28370 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.44□□□□□ -2.02
SMARCA1P28370 AL445646.1-201ENST00000431784 216 ntBASIC2.44□□□□□ -2.02
SMARCA1P28370 AL353689.1-201ENST00000438895 199 ntBASIC2.44□□□□□ -2.02
SMARCA1P28370 AC055731.1-201ENST00000474387 401 ntBASIC2.44□□□□□ -2.02
SMARCA1P28370 RPS27P22-201ENST00000478056 241 ntBASIC2.44□□□□□ -2.02
SMARCA1P28370 RNU6-1337P-201ENST00000516525 95 ntBASIC2.44□□□□□ -2.02
SMARCA1P28370 AC136628.3-201ENST00000521868 290 ntBASIC2.44□□□□□ -2.02
SMARCA1P28370 IGKV3-31-201ENST00000523109 329 ntBASIC2.44□□□□□ -2.02
SMARCA1P28370 AL162424.1-201ENST00000602325 221 ntBASIC2.44□□□□□ -2.02
SMARCA1P28370 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.44□□□□□ -2.02
SMARCA1P28370 AC006435.5-201ENST00000624486 112 ntBASIC2.44□□□□□ -2.02
SMARCA1P28370 MIR338-201ENST00000636369 67 ntBASIC2.44□□□□□ -2.02
SMARCA1P28370 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.44□□□□□ -2.02
SMARCA1P28370 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SMARCA1P28370 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.44□□□□□ -2.02
SMARCA1P28370 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SMARCA1P28370 AL356292.1-201ENST00000283110 373 ntBASIC2.43□□□□□ -2.02
SMARCA1P28370 snoU2-30.2-201ENST00000362805 70 ntBASIC2.43□□□□□ -2.02
SMARCA1P28370 Y_RNA.257-201ENST00000364596 102 ntBASIC2.43□□□□□ -2.02
SMARCA1P28370 Y_RNA.368-201ENST00000365547 113 ntBASIC2.43□□□□□ -2.02
SMARCA1P28370 Y_RNA.552-201ENST00000384665 112 ntBASIC2.43□□□□□ -2.02
SMARCA1P28370 RNU6-417P-201ENST00000384712 107 ntBASIC2.43□□□□□ -2.02
SMARCA1P28370 MIR1253-201ENST00000408273 105 ntBASIC2.43□□□□□ -2.02
SMARCA1P28370 RNU6-710P-201ENST00000410424 105 ntBASIC2.43□□□□□ -2.02
SMARCA1P28370 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.43□□□□□ -2.02
SMARCA1P28370 RPS27P21-201ENST00000486977 252 ntBASIC2.43□□□□□ -2.02
SMARCA1P28370 RNU6-794P-201ENST00000517261 64 ntBASIC2.43□□□□□ -2.02
SMARCA1P28370 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.43□□□□□ -2.02
SMARCA1P28370 MIR4282-201ENST00000583613 67 ntBASIC2.43□□□□□ -2.02
SMARCA1P28370 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.43□□□□□ -2.02
SMARCA1P28370 AC141273.2-201ENST00000618989 130 ntBASIC2.43□□□□□ -2.02
SMARCA1P28370 AC022513.1-201ENST00000624512 117 ntBASIC2.43□□□□□ -2.02
SMARCA1P28370 CENPCP1-201ENST00000533085 2578 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 RNU1-58P-201ENST00000362413 163 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 RNU6-1272P-201ENST00000362776 107 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 Y_RNA.82-201ENST00000363000 102 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 Y_RNA.92-201ENST00000363043 102 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 RNU6-23P-201ENST00000363283 107 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 RNU6-1048P-201ENST00000364054 107 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 RNY1-201ENST00000364228 113 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 Y_RNA.235-201ENST00000364412 102 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 Y_RNA.306-201ENST00000365015 102 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 Y_RNA.312-201ENST00000365089 102 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 Y_RNA.322-201ENST00000365151 102 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 Y_RNA.341-201ENST00000365341 102 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 SNORD116-13-201ENST00000384408 92 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 RNU6-763P-201ENST00000390865 106 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 SNORA26.5-201ENST00000391215 123 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 AL023284.1-201ENST00000403956 276 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 HMGN2P38-201ENST00000423806 265 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 HSPE1P13-201ENST00000451143 297 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 Y_RNA.650-201ENST00000459002 102 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 U8.19-201ENST00000459095 133 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 SNORD116-28-201ENST00000516123 91 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 RNU6-63P-201ENST00000516690 95 ntBASIC2.42□□□□□ -2.02
SMARCA1P28370 Y_RNA.777-201ENST00000516982 102 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms