Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 MIR4672-201ENST00000583126 81 ntBASIC2.58□□□□□ -2
XPAP23025 MIR3670-1-201ENST00000584160 65 ntBASIC2.58□□□□□ -2
XPAP23025 MIR3670-3-201ENST00000584855 65 ntBASIC2.58□□□□□ -2
XPAP23025 AL049779.4-201ENST00000604500 156 ntBASIC2.58□□□□□ -2
XPAP23025 MIR3670-4-201ENST00000612260 65 ntBASIC2.58□□□□□ -2
XPAP23025 MIR548AY-201ENST00000617669 107 ntBASIC2.58□□□□□ -2
XPAP23025 AC010297.1-201ENST00000623948 149 ntBASIC2.58□□□□□ -2
XPAP23025 CENPCP1-201ENST00000533085 2578 ntBASIC2.58□□□□□ -2
XPAP23025 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.58□□□□□ -2
XPAP23025 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
XPAP23025 Y_RNA.24-201ENST00000362508 103 ntBASIC2.57□□□□□ -2
XPAP23025 SNORA3A-201ENST00000364113 130 ntBASIC2.57□□□□□ -2
XPAP23025 RNU4-17P-201ENST00000365598 141 ntBASIC2.57□□□□□ -2
XPAP23025 Y_RNA.571-201ENST00000384753 98 ntBASIC2.57□□□□□ -2
XPAP23025 MIR626-201ENST00000385032 94 ntBASIC2.57□□□□□ -2
XPAP23025 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.57□□□□□ -2
XPAP23025 MIR1253-201ENST00000408273 105 ntBASIC2.57□□□□□ -2
XPAP23025 RNU6-383P-201ENST00000410864 94 ntBASIC2.57□□□□□ -2
XPAP23025 AL135786.1-201ENST00000415892 214 ntBASIC2.57□□□□□ -2
XPAP23025 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.57□□□□□ -2
XPAP23025 AC097462.1-201ENST00000514125 324 ntBASIC2.57□□□□□ -2
XPAP23025 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.57□□□□□ -2
XPAP23025 AC078899.2-201ENST00000595282 212 ntBASIC2.57□□□□□ -2
XPAP23025 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
XPAP23025 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
XPAP23025 AC245060.5-201ENST00000610778 3293 ntBASIC2.56□□□□□ -2
XPAP23025 SNORD115-3-201ENST00000363100 82 ntBASIC2.56□□□□□ -2
XPAP23025 RNU6-1205P-201ENST00000363625 106 ntBASIC2.56□□□□□ -2
XPAP23025 SNORA33-201ENST00000363664 130 ntBASIC2.56□□□□□ -2
XPAP23025 RNU6-1164P-201ENST00000364428 107 ntBASIC2.56□□□□□ -2
XPAP23025 MIR27B-201ENST00000385129 97 ntBASIC2.56□□□□□ -2
XPAP23025 RNU6-381P-201ENST00000391259 108 ntBASIC2.56□□□□□ -2
XPAP23025 RNA5SP467-201ENST00000391274 118 ntBASIC2.56□□□□□ -2
XPAP23025 AL590004.2-201ENST00000404787 371 ntBASIC2.56□□□□□ -2
XPAP23025 SNORA36B-201ENST00000410438 131 ntBASIC2.56□□□□□ -2
XPAP23025 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.56□□□□□ -2
XPAP23025 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.56□□□□□ -2
XPAP23025 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.56□□□□□ -2
XPAP23025 RNU7-172P-201ENST00000517125 64 ntBASIC2.56□□□□□ -2
XPAP23025 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.56□□□□□ -2
XPAP23025 POLR3GP1-201ENST00000594073 261 ntBASIC2.56□□□□□ -2
XPAP23025 AC005972.2-201ENST00000604690 348 ntBASIC2.56□□□□□ -2
XPAP23025 U6.73-201ENST00000619194 103 ntBASIC2.56□□□□□ -2
XPAP23025 U4.3-201ENST00000621047 82 ntBASIC2.56□□□□□ -2
XPAP23025 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.56□□□□□ -2
XPAP23025 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.56□□□□□ -2
XPAP23025 MIR338-201ENST00000636369 67 ntBASIC2.56□□□□□ -2
XPAP23025 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.56□□□□□ -2
XPAP23025 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
XPAP23025 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
XPAP23025 MIR449A-201ENST00000362113 91 ntBASIC2.55□□□□□ -2
XPAP23025 snoU2-30.2-201ENST00000362805 70 ntBASIC2.55□□□□□ -2
XPAP23025 Y_RNA.238-201ENST00000364441 102 ntBASIC2.55□□□□□ -2
XPAP23025 RNU6-969P-201ENST00000383900 105 ntBASIC2.55□□□□□ -2
XPAP23025 RNU6-1323P-201ENST00000384025 107 ntBASIC2.55□□□□□ -2
XPAP23025 Y_RNA.435-201ENST00000384095 112 ntBASIC2.55□□□□□ -2
XPAP23025 SNORA8.3-201ENST00000384679 139 ntBASIC2.55□□□□□ -2
XPAP23025 MTND2P29-201ENST00000438595 412 ntBASIC2.55□□□□□ -2
XPAP23025 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.55□□□□□ -2
XPAP23025 SCARNA8-201ENST00000515924 131 ntBASIC2.55□□□□□ -2
XPAP23025 RNU6-453P-201ENST00000516819 85 ntBASIC2.55□□□□□ -2
XPAP23025 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.55□□□□□ -2
XPAP23025 MRPS18CP4-201ENST00000535821 231 ntBASIC2.55□□□□□ -2
XPAP23025 AL137100.2-201ENST00000555786 315 ntBASIC2.55□□□□□ -2
XPAP23025 MIR5092-201ENST00000583139 88 ntBASIC2.55□□□□□ -2
XPAP23025 AP003357.1-201ENST00000604497 148 ntBASIC2.55□□□□□ -2
XPAP23025 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
XPAP23025 Y_RNA.7-201ENST00000362352 102 ntBASIC2.54□□□□□ -2
XPAP23025 RNA5SP493-201ENST00000364115 91 ntBASIC2.54□□□□□ -2
XPAP23025 RNU6-160P-201ENST00000384591 107 ntBASIC2.54□□□□□ -2
XPAP23025 RNU6-1186P-201ENST00000410429 97 ntBASIC2.54□□□□□ -2
XPAP23025 EDDM3CP-201ENST00000415977 425 ntBASIC2.54□□□□□ -2
XPAP23025 EBAG9P1-201ENST00000418955 543 ntBASIC2.54□□□□□ -2
XPAP23025 AL162725.1-201ENST00000435405 301 ntBASIC2.54□□□□□ -2
XPAP23025 RPL36AP21-201ENST00000490372 323 ntBASIC2.54□□□□□ -2
XPAP23025 Y_RNA.662-201ENST00000516028 97 ntBASIC2.54□□□□□ -2
XPAP23025 RNU6-255P-201ENST00000516957 105 ntBASIC2.54□□□□□ -2
XPAP23025 RNU7-128P-201ENST00000517247 62 ntBASIC2.54□□□□□ -2
XPAP23025 AC026271.5-201ENST00000577873 130 ntBASIC2.54□□□□□ -2
XPAP23025 MIR4435-1-201ENST00000582552 80 ntBASIC2.54□□□□□ -2
XPAP23025 Y_RNA.802-201ENST00000614892 130 ntBASIC2.54□□□□□ -2
XPAP23025 U6.106-201ENST00000636360 105 ntBASIC2.54□□□□□ -2
XPAP23025 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.54□□□□□ -2
XPAP23025 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
XPAP23025 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.53□□□□□ -2
XPAP23025 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.53□□□□□ -2
XPAP23025 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.53□□□□□ -2
XPAP23025 Y_RNA.240-201ENST00000364469 95 ntBASIC2.53□□□□□ -2
XPAP23025 AL117342.1-201ENST00000404861 406 ntBASIC2.53□□□□□ -2
XPAP23025 AL353689.1-201ENST00000438895 199 ntBASIC2.53□□□□□ -2
XPAP23025 AL513328.1-201ENST00000446460 224 ntBASIC2.53□□□□□ -2
XPAP23025 RNU1-131P-201ENST00000458943 161 ntBASIC2.53□□□□□ -2
XPAP23025 RN7SL297P-201ENST00000483161 293 ntBASIC2.53□□□□□ -2
XPAP23025 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.53□□□□□ -2
XPAP23025 RNA5SP320-201ENST00000516263 124 ntBASIC2.53□□□□□ -2
XPAP23025 RNA5SP137-201ENST00000516833 135 ntBASIC2.53□□□□□ -2
XPAP23025 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.53□□□□□ -2
XPAP23025 AC127455.1-201ENST00000565496 145 ntBASIC2.53□□□□□ -2
XPAP23025 MIR3169-201ENST00000578032 83 ntBASIC2.53□□□□□ -2
XPAP23025 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 387 ms