Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
USF1P22415 Y_RNA.106-201ENST00000363189 100 ntBASIC0.61□□□□□ -2.31
USF1P22415 RNU6-833P-201ENST00000363486 107 ntBASIC0.61□□□□□ -2.31
USF1P22415 SNORA75.2-201ENST00000391138 150 ntBASIC0.61□□□□□ -2.31
USF1P22415 SNORA75.3-201ENST00000391231 150 ntBASIC0.61□□□□□ -2.31
USF1P22415 MIR891A-201ENST00000401237 79 ntBASIC0.61□□□□□ -2.31
USF1P22415 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.61□□□□□ -2.31
USF1P22415 RNU5A-5P-201ENST00000411054 116 ntBASIC0.61□□□□□ -2.31
USF1P22415 RNU6-1001P-201ENST00000411265 100 ntBASIC0.61□□□□□ -2.31
USF1P22415 ELOCP21-201ENST00000412558 336 ntBASIC0.61□□□□□ -2.31
USF1P22415 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.61□□□□□ -2.31
USF1P22415 FABP5P4-201ENST00000437203 171 ntBASIC0.61□□□□□ -2.31
USF1P22415 RPEP5-201ENST00000441137 268 ntBASIC0.61□□□□□ -2.31
USF1P22415 MTND1P29-201ENST00000448112 647 ntBASIC0.61□□□□□ -2.31
USF1P22415 RNU6-864P-201ENST00000516256 108 ntBASIC0.61□□□□□ -2.31
USF1P22415 SNORD111.1-201ENST00000516421 86 ntBASIC0.61□□□□□ -2.31
USF1P22415 AL096861.1-201ENST00000610899 123 ntBASIC0.61□□□□□ -2.31
USF1P22415 AL391903.3-201ENST00000612158 163 ntBASIC0.61□□□□□ -2.31
USF1P22415 AC127459.3-201ENST00000624328 466 ntBASIC0.61□□□□□ -2.31
USF1P22415 AC024614.3-201ENST00000637860 256 ntBASIC0.61□□□□□ -2.31
USF1P22415 MTND5P16-201ENST00000460269 1703 ntBASIC0.61□□□□□ -2.31
USF1P22415 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.6□□□□□ -2.31
USF1P22415 MIR329-1-201ENST00000385028 80 ntBASIC0.6□□□□□ -2.31
USF1P22415 EIF1P2-201ENST00000428233 350 ntBASIC0.6□□□□□ -2.31
USF1P22415 MTND3P21-201ENST00000433774 331 ntBASIC0.6□□□□□ -2.31
USF1P22415 MTND5P15-201ENST00000434246 349 ntBASIC0.6□□□□□ -2.31
USF1P22415 Z98949.2-201ENST00000440996 144 ntBASIC0.6□□□□□ -2.31
USF1P22415 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.6□□□□□ -2.31
USF1P22415 AC074133.1-201ENST00000515696 183 ntBASIC0.6□□□□□ -2.31
USF1P22415 RNU1-54P-201ENST00000517181 120 ntBASIC0.6□□□□□ -2.31
USF1P22415 AC125232.2-201ENST00000592457 143 ntBASIC0.6□□□□□ -2.31
USF1P22415 MIR410-201ENST00000362222 80 ntBASIC0.59□□□□□ -2.31
USF1P22415 RNA5SP361-201ENST00000362686 118 ntBASIC0.59□□□□□ -2.31
USF1P22415 RNU4-41P-201ENST00000364426 143 ntBASIC0.59□□□□□ -2.31
USF1P22415 RNU6-1013P-201ENST00000384180 107 ntBASIC0.59□□□□□ -2.31
USF1P22415 RNU6-1145P-201ENST00000384246 107 ntBASIC0.59□□□□□ -2.31
USF1P22415 MIR526A1-201ENST00000384897 85 ntBASIC0.59□□□□□ -2.31
USF1P22415 MIR873-201ENST00000401120 77 ntBASIC0.59□□□□□ -2.31
USF1P22415 AC233266.1-201ENST00000454518 96 ntBASIC0.59□□□□□ -2.31
USF1P22415 RNU6-506P-201ENST00000516553 94 ntBASIC0.59□□□□□ -2.31
USF1P22415 AC022868.1-201ENST00000517767 391 ntBASIC0.59□□□□□ -2.31
USF1P22415 AC109635.3-201ENST00000529536 185 ntBASIC0.59□□□□□ -2.31
USF1P22415 AC242852.1-201ENST00000612151 96 ntBASIC0.59□□□□□ -2.31
USF1P22415 AC007742.2-201ENST00000618226 398 ntBASIC0.59□□□□□ -2.31
USF1P22415 AC244015.1-201ENST00000622301 99 ntBASIC0.59□□□□□ -2.31
USF1P22415 AC090617.10-201ENST00000624308 134 ntBASIC0.59□□□□□ -2.31
USF1P22415 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.59□□□□□ -2.32
USF1P22415 RNU6-1059P-201ENST00000363752 98 ntBASIC0.58□□□□□ -2.32
USF1P22415 RNU6-117P-201ENST00000365415 107 ntBASIC0.58□□□□□ -2.32
USF1P22415 MIR193B-201ENST00000384907 83 ntBASIC0.58□□□□□ -2.32
USF1P22415 AC009161.1-201ENST00000417306 376 ntBASIC0.58□□□□□ -2.32
USF1P22415 USP9YP30-201ENST00000430729 455 ntBASIC0.58□□□□□ -2.32
USF1P22415 PCNPP5-201ENST00000452246 481 ntBASIC0.58□□□□□ -2.32
USF1P22415 SUMO1P2-201ENST00000452524 304 ntBASIC0.58□□□□□ -2.32
USF1P22415 AC117454.1-201ENST00000491120 168 ntBASIC0.58□□□□□ -2.32
USF1P22415 CYCTP-201ENST00000504253 315 ntBASIC0.58□□□□□ -2.32
USF1P22415 RNU6-314P-201ENST00000516574 104 ntBASIC0.58□□□□□ -2.32
USF1P22415 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.58□□□□□ -2.32
USF1P22415 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.58□□□□□ -2.32
USF1P22415 AC104260.1-201ENST00000616660 539 ntBASIC0.58□□□□□ -2.32
USF1P22415 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.58□□□□□ -2.32
USF1P22415 AC027279.3-201ENST00000625055 122 ntBASIC0.58□□□□□ -2.32
USF1P22415 U6.115-201ENST00000636045 103 ntBASIC0.58□□□□□ -2.32
USF1P22415 RNA5SP347-201ENST00000362445 119 ntBASIC0.57□□□□□ -2.32
USF1P22415 RNU6-1090P-201ENST00000364065 94 ntBASIC0.57□□□□□ -2.32
USF1P22415 Y_RNA.336-201ENST00000365307 109 ntBASIC0.57□□□□□ -2.32
USF1P22415 Y_RNA.364-201ENST00000365532 101 ntBASIC0.57□□□□□ -2.32
USF1P22415 RNU6-842P-201ENST00000384269 107 ntBASIC0.57□□□□□ -2.32
USF1P22415 Y_RNA.498-201ENST00000384460 102 ntBASIC0.57□□□□□ -2.32
USF1P22415 MIR605-201ENST00000385078 83 ntBASIC0.57□□□□□ -2.32
USF1P22415 MIR190B-201ENST00000401119 79 ntBASIC0.57□□□□□ -2.32
USF1P22415 MIR936-201ENST00000401264 98 ntBASIC0.57□□□□□ -2.32
USF1P22415 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.57□□□□□ -2.32
USF1P22415 AC005534.2-201ENST00000431047 433 ntBASIC0.57□□□□□ -2.32
USF1P22415 AC093019.1-201ENST00000443135 252 ntBASIC0.57□□□□□ -2.32
USF1P22415 UBE2V1P7-201ENST00000446395 340 ntBASIC0.57□□□□□ -2.32
USF1P22415 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.57□□□□□ -2.32
USF1P22415 SNORD5.1-201ENST00000458800 75 ntBASIC0.57□□□□□ -2.32
USF1P22415 snoU13.25-201ENST00000458945 104 ntBASIC0.57□□□□□ -2.32
USF1P22415 RNU6-566P-201ENST00000516790 107 ntBASIC0.57□□□□□ -2.32
USF1P22415 RNU6-1088P-201ENST00000516850 104 ntBASIC0.57□□□□□ -2.32
USF1P22415 RNU6-273P-201ENST00000516937 96 ntBASIC0.57□□□□□ -2.32
USF1P22415 RNU6-1096P-201ENST00000517089 102 ntBASIC0.57□□□□□ -2.32
USF1P22415 RNU6-1314P-201ENST00000517139 104 ntBASIC0.57□□□□□ -2.32
USF1P22415 RNU6-1116P-201ENST00000517269 99 ntBASIC0.57□□□□□ -2.32
USF1P22415 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.57□□□□□ -2.32
USF1P22415 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.57□□□□□ -2.32
USF1P22415 AC004812.1-201ENST00000540773 146 ntBASIC0.57□□□□□ -2.32
USF1P22415 AC018448.1-201ENST00000552843 316 ntBASIC0.57□□□□□ -2.32
USF1P22415 MIR5701-3-201ENST00000578890 82 ntBASIC0.57□□□□□ -2.32
USF1P22415 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.57□□□□□ -2.32
USF1P22415 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.57□□□□□ -2.32
USF1P22415 MIR5701-1-201ENST00000585138 82 ntBASIC0.57□□□□□ -2.32
USF1P22415 AL353765.1-201ENST00000605514 183 ntBASIC0.57□□□□□ -2.32
USF1P22415 AC012557.2-201ENST00000605919 418 ntBASIC0.57□□□□□ -2.32
USF1P22415 AC005828.6-201ENST00000606610 232 ntBASIC0.57□□□□□ -2.32
USF1P22415 AL357075.2-201ENST00000614906 189 ntBASIC0.57□□□□□ -2.32
USF1P22415 MIR5701-2-201ENST00000615634 82 ntBASIC0.57□□□□□ -2.32
USF1P22415 SNORD114-7-201ENST00000362520 77 ntBASIC0.56□□□□□ -2.32
USF1P22415 Y_RNA.48-201ENST00000362710 103 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms