Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 Y_RNA.494-201ENST00000384432 111 ntBASIC-2.61□□□□□ -2.83
TOP2AP11388 MIR1283-1-201ENST00000408494 87 ntBASIC-2.61□□□□□ -2.83
TOP2AP11388 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-2.61□□□□□ -2.83
TOP2AP11388 RNU7-128P-201ENST00000517247 62 ntBASIC-2.61□□□□□ -2.83
TOP2AP11388 Z99497.2-201ENST00000603634 310 ntBASIC-2.61□□□□□ -2.83
TOP2AP11388 AL158042.1-201ENST00000605338 460 ntBASIC-2.61□□□□□ -2.83
TOP2AP11388 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-2.61□□□□□ -2.83
TOP2AP11388 AC108747.1-201ENST00000609508 535 ntBASIC-2.61□□□□□ -2.83
TOP2AP11388 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-2.61□□□□□ -2.83
TOP2AP11388 AC010332.2-201ENST00000613083 1904 ntBASIC-2.61□□□□□ -2.83
TOP2AP11388 Y_RNA.38-201ENST00000362617 102 ntBASIC-2.62□□□□□ -2.83
TOP2AP11388 RNU6-78P-201ENST00000362897 107 ntBASIC-2.62□□□□□ -2.83
TOP2AP11388 RNU6-926P-201ENST00000384075 107 ntBASIC-2.62□□□□□ -2.83
TOP2AP11388 Y_RNA.548-201ENST00000384656 105 ntBASIC-2.62□□□□□ -2.83
TOP2AP11388 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-2.62□□□□□ -2.83
TOP2AP11388 RNU7-62P-201ENST00000458856 62 ntBASIC-2.62□□□□□ -2.83
TOP2AP11388 RNU7-134P-201ENST00000458997 64 ntBASIC-2.62□□□□□ -2.83
TOP2AP11388 AC093809.1-201ENST00000509155 340 ntBASIC-2.62□□□□□ -2.83
TOP2AP11388 RNU6-175P-201ENST00000516896 107 ntBASIC-2.62□□□□□ -2.83
TOP2AP11388 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-2.62□□□□□ -2.83
TOP2AP11388 MIR4753-201ENST00000585119 83 ntBASIC-2.62□□□□□ -2.83
TOP2AP11388 AC010975.3-201ENST00000618727 978 ntBASIC-2.62□□□□□ -2.83
TOP2AP11388 USP9YP28-201ENST00000435142 589 ntBASIC-2.63□□□□□ -2.83
TOP2AP11388 ZNF114P1-201ENST00000453500 292 ntBASIC-2.63□□□□□ -2.83
TOP2AP11388 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-2.63□□□□□ -2.83
TOP2AP11388 AP000676.1-201ENST00000533307 52 ntBASIC-2.63□□□□□ -2.83
TOP2AP11388 MTND1P8-201ENST00000571424 950 ntBASIC-2.63□□□□□ -2.83
TOP2AP11388 DPPA3P3-201ENST00000603842 430 ntBASIC-2.63□□□□□ -2.83
TOP2AP11388 AC097478.2-201ENST00000610572 514 ntBASIC-2.63□□□□□ -2.83
TOP2AP11388 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-2.63□□□□□ -2.83
TOP2AP11388 MIR335-201ENST00000362173 94 ntBASIC-2.63□□□□□ -2.83
TOP2AP11388 RNY4P28-201ENST00000365281 93 ntBASIC-2.63□□□□□ -2.83
TOP2AP11388 MIR181B2-201ENST00000385004 89 ntBASIC-2.63□□□□□ -2.83
TOP2AP11388 MIR516B2-201ENST00000385190 85 ntBASIC-2.63□□□□□ -2.83
TOP2AP11388 MIR549A-201ENST00000385268 96 ntBASIC-2.63□□□□□ -2.83
TOP2AP11388 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-2.63□□□□□ -2.83
TOP2AP11388 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-2.63□□□□□ -2.83
TOP2AP11388 MTCYBP39-201ENST00000437562 491 ntBASIC-2.63□□□□□ -2.83
TOP2AP11388 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-2.63□□□□□ -2.83
TOP2AP11388 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-2.63□□□□□ -2.83
TOP2AP11388 AL138889.2-201ENST00000603883 242 ntBASIC-2.63□□□□□ -2.83
TOP2AP11388 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-2.63□□□□□ -2.83
TOP2AP11388 SNORA75.4-201ENST00000391278 119 ntBASIC-2.64□□□□□ -2.83
TOP2AP11388 RNA5SP201-201ENST00000410316 124 ntBASIC-2.64□□□□□ -2.83
TOP2AP11388 AC007547.1-201ENST00000462177 490 ntBASIC-2.64□□□□□ -2.83
TOP2AP11388 uc_338.10-201ENST00000621872 182 ntBASIC-2.64□□□□□ -2.83
TOP2AP11388 Y_RNA.42-201ENST00000362660 108 ntBASIC-2.65□□□□□ -2.83
TOP2AP11388 MIR518F-201ENST00000384973 87 ntBASIC-2.65□□□□□ -2.83
TOP2AP11388 MTND3P8-201ENST00000412909 339 ntBASIC-2.65□□□□□ -2.83
TOP2AP11388 AC005345.1-201ENST00000431868 217 ntBASIC-2.65□□□□□ -2.83
TOP2AP11388 RNU7-55P-201ENST00000459426 62 ntBASIC-2.65□□□□□ -2.83
TOP2AP11388 RNU6-759P-201ENST00000516740 103 ntBASIC-2.65□□□□□ -2.83
TOP2AP11388 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-2.65□□□□□ -2.83
TOP2AP11388 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-2.65□□□□□ -2.83
TOP2AP11388 uc_338.4-201ENST00000616635 176 ntBASIC-2.65□□□□□ -2.83
TOP2AP11388 AC027279.3-201ENST00000625055 122 ntBASIC-2.65□□□□□ -2.83
TOP2AP11388 SNORD98-201ENST00000636377 67 ntBASIC-2.65□□□□□ -2.83
TOP2AP11388 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.66□□□□□ -2.84
TOP2AP11388 SNORA24-201ENST00000384096 131 ntBASIC-2.66□□□□□ -2.84
TOP2AP11388 RNU6-1025P-201ENST00000410629 104 ntBASIC-2.66□□□□□ -2.84
TOP2AP11388 HGF-207ENST00000453018 721 ntTSL 3 BASIC-2.66□□□□□ -2.84
TOP2AP11388 snoU13.13-201ENST00000458842 104 ntBASIC-2.66□□□□□ -2.84
TOP2AP11388 RNU6-410P-201ENST00000517006 107 ntBASIC-2.66□□□□□ -2.84
TOP2AP11388 LARP7P2-201ENST00000575306 125 ntBASIC-2.66□□□□□ -2.84
TOP2AP11388 BNIP3P9-201ENST00000603714 553 ntBASIC-2.66□□□□□ -2.84
TOP2AP11388 RNU6-1125P-201ENST00000363601 107 ntBASIC-2.67□□□□□ -2.84
TOP2AP11388 SNORD123-201ENST00000459473 70 ntBASIC-2.67□□□□□ -2.84
TOP2AP11388 RNU6-223P-201ENST00000362830 107 ntBASIC-2.68□□□□□ -2.84
TOP2AP11388 SNORD115-28-201ENST00000363931 81 ntBASIC-2.68□□□□□ -2.84
TOP2AP11388 MIR544A-201ENST00000384855 91 ntBASIC-2.68□□□□□ -2.84
TOP2AP11388 AL606845.1-201ENST00000404881 255 ntBASIC-2.68□□□□□ -2.84
TOP2AP11388 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-2.68□□□□□ -2.84
TOP2AP11388 SNORD18.2-201ENST00000459604 70 ntBASIC-2.68□□□□□ -2.84
TOP2AP11388 MTCO3P38-201ENST00000468910 766 ntBASIC-2.68□□□□□ -2.84
TOP2AP11388 MTCO3P9-201ENST00000506989 781 ntBASIC-2.68□□□□□ -2.84
TOP2AP11388 AL442663.2-201ENST00000554385 511 ntBASIC-2.68□□□□□ -2.84
TOP2AP11388 AL512506.1-201ENST00000613918 449 ntBASIC-2.68□□□□□ -2.84
TOP2AP11388 AL662814.1-201ENST00000617364 121 ntBASIC-2.68□□□□□ -2.84
TOP2AP11388 AC091912.2-201ENST00000624798 167 ntBASIC-2.68□□□□□ -2.84
TOP2AP11388 RNU6-312P-201ENST00000364629 107 ntBASIC-2.68□□□□□ -2.84
TOP2AP11388 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.68□□□□□ -2.84
TOP2AP11388 RNU6-432P-201ENST00000384196 109 ntBASIC-2.68□□□□□ -2.84
TOP2AP11388 AL590084.2-201ENST00000401481 382 ntBASIC-2.68□□□□□ -2.84
TOP2AP11388 UBE2V1P11-201ENST00000411559 285 ntBASIC-2.68□□□□□ -2.84
TOP2AP11388 AL929288.2-201ENST00000446368 407 ntBASIC-2.68□□□□□ -2.84
TOP2AP11388 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-2.68□□□□□ -2.84
TOP2AP11388 MIR3923-201ENST00000579521 83 ntBASIC-2.68□□□□□ -2.84
TOP2AP11388 MIR5692A1-201ENST00000580523 69 ntBASIC-2.68□□□□□ -2.84
TOP2AP11388 MIR8066-201ENST00000617280 78 ntBASIC-2.68□□□□□ -2.84
TOP2AP11388 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.69□□□□□ -2.84
TOP2AP11388 SNORD114-29-201ENST00000364819 70 ntBASIC-2.69□□□□□ -2.84
TOP2AP11388 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-2.69□□□□□ -2.84
TOP2AP11388 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-2.69□□□□□ -2.84
TOP2AP11388 Z98949.2-201ENST00000440996 144 ntBASIC-2.69□□□□□ -2.84
TOP2AP11388 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-2.69□□□□□ -2.84
TOP2AP11388 AC104073.3-201ENST00000610942 955 ntBASIC-2.69□□□□□ -2.84
TOP2AP11388 MIR6854-201ENST00000614935 69 ntBASIC-2.69□□□□□ -2.84
TOP2AP11388 U6.73-201ENST00000619194 103 ntBASIC-2.69□□□□□ -2.84
TOP2AP11388 RNU6-1233P-201ENST00000362922 102 ntBASIC-2.7□□□□□ -2.84
TOP2AP11388 Y_RNA.151-201ENST00000363566 112 ntBASIC-2.7□□□□□ -2.84
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms