Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.53□□□□□ -2.16
RAB40ALP0C0E4 SNORA70.12-201ENST00000516084 153 ntBASIC1.53□□□□□ -2.16
RAB40ALP0C0E4 SNORA31.10-201ENST00000516482 106 ntBASIC1.53□□□□□ -2.16
RAB40ALP0C0E4 MIR4303-201ENST00000581299 66 ntBASIC1.53□□□□□ -2.16
RAB40ALP0C0E4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.53□□□□□ -2.16
RAB40ALP0C0E4 AL512598.1-201ENST00000610158 273 ntBASIC1.53□□□□□ -2.16
RAB40ALP0C0E4 AC007485.1-201ENST00000616755 206 ntBASIC1.53□□□□□ -2.16
RAB40ALP0C0E4 AL160413.1-201ENST00000622780 310 ntBASIC1.53□□□□□ -2.16
RAB40ALP0C0E4 AC090574.1-201ENST00000623186 233 ntBASIC1.53□□□□□ -2.16
RAB40ALP0C0E4 SNORD114-7-201ENST00000362520 77 ntBASIC1.52□□□□□ -2.17
RAB40ALP0C0E4 Y_RNA.61-201ENST00000362835 102 ntBASIC1.52□□□□□ -2.17
RAB40ALP0C0E4 RNU6-324P-201ENST00000363957 106 ntBASIC1.52□□□□□ -2.17
RAB40ALP0C0E4 Y_RNA.813-201ENST00000364639 102 ntBASIC1.52□□□□□ -2.17
RAB40ALP0C0E4 SNORD42.2-201ENST00000365570 69 ntBASIC1.52□□□□□ -2.17
RAB40ALP0C0E4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.52□□□□□ -2.17
RAB40ALP0C0E4 Y_RNA.395-201ENST00000383945 109 ntBASIC1.52□□□□□ -2.17
RAB40ALP0C0E4 Y_RNA.445-201ENST00000384168 102 ntBASIC1.52□□□□□ -2.17
RAB40ALP0C0E4 Y_RNA.526-201ENST00000384572 110 ntBASIC1.52□□□□□ -2.17
RAB40ALP0C0E4 RNU6-1031P-201ENST00000384773 107 ntBASIC1.52□□□□□ -2.17
RAB40ALP0C0E4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.52□□□□□ -2.17
RAB40ALP0C0E4 MTND1P14-201ENST00000427400 950 ntBASIC1.52□□□□□ -2.17
RAB40ALP0C0E4 AC091021.1-201ENST00000468051 388 ntBASIC1.52□□□□□ -2.17
RAB40ALP0C0E4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.52□□□□□ -2.17
RAB40ALP0C0E4 RNU6-155P-201ENST00000516347 100 ntBASIC1.52□□□□□ -2.17
RAB40ALP0C0E4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.52□□□□□ -2.17
RAB40ALP0C0E4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.52□□□□□ -2.17
RAB40ALP0C0E4 MIR4285-201ENST00000581001 85 ntBASIC1.52□□□□□ -2.17
RAB40ALP0C0E4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.52□□□□□ -2.17
RAB40ALP0C0E4 Y_RNA.772-201ENST00000606692 102 ntBASIC1.52□□□□□ -2.17
RAB40ALP0C0E4 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.52□□□□□ -2.17
RAB40ALP0C0E4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.52□□□□□ -2.17
RAB40ALP0C0E4 Y_RNA.4-201ENST00000362333 112 ntBASIC1.51□□□□□ -2.17
RAB40ALP0C0E4 Y_RNA.267-201ENST00000364679 109 ntBASIC1.51□□□□□ -2.17
RAB40ALP0C0E4 Y_RNA.446-201ENST00000384178 104 ntBASIC1.51□□□□□ -2.17
RAB40ALP0C0E4 MIR562-201ENST00000384894 95 ntBASIC1.51□□□□□ -2.17
RAB40ALP0C0E4 AL031003.1-201ENST00000404229 172 ntBASIC1.51□□□□□ -2.17
RAB40ALP0C0E4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.51□□□□□ -2.17
RAB40ALP0C0E4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.51□□□□□ -2.17
RAB40ALP0C0E4 Y_RNA.639-201ENST00000458981 102 ntBASIC1.51□□□□□ -2.17
RAB40ALP0C0E4 AL163540.1-201ENST00000485382 386 ntBASIC1.51□□□□□ -2.17
RAB40ALP0C0E4 RN7SKP295-201ENST00000517264 153 ntBASIC1.51□□□□□ -2.17
RAB40ALP0C0E4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.51□□□□□ -2.17
RAB40ALP0C0E4 MIR4422-201ENST00000581938 83 ntBASIC1.51□□□□□ -2.17
RAB40ALP0C0E4 AL390123.1-201ENST00000603216 237 ntBASIC1.51□□□□□ -2.17
RAB40ALP0C0E4 AL121655.1-201ENST00000605811 308 ntBASIC1.51□□□□□ -2.17
RAB40ALP0C0E4 AC021506.2-201ENST00000612354 169 ntBASIC1.51□□□□□ -2.17
RAB40ALP0C0E4 AC010205.1-201ENST00000616668 449 ntBASIC1.51□□□□□ -2.17
RAB40ALP0C0E4 RNU6-60P-201ENST00000364792 103 ntBASIC1.5□□□□□ -2.17
RAB40ALP0C0E4 RNU6-1175P-201ENST00000365200 107 ntBASIC1.5□□□□□ -2.17
RAB40ALP0C0E4 RNU6-505P-201ENST00000384427 107 ntBASIC1.5□□□□□ -2.17
RAB40ALP0C0E4 Y_RNA.535-201ENST00000384612 99 ntBASIC1.5□□□□□ -2.17
RAB40ALP0C0E4 MIR194-1-201ENST00000384892 85 ntBASIC1.5□□□□□ -2.17
RAB40ALP0C0E4 MIR517C-201ENST00000385103 95 ntBASIC1.5□□□□□ -2.17
RAB40ALP0C0E4 RNU6-308P-201ENST00000390957 107 ntBASIC1.5□□□□□ -2.17
RAB40ALP0C0E4 AL034345.1-201ENST00000407768 123 ntBASIC1.5□□□□□ -2.17
RAB40ALP0C0E4 RPS20P15-201ENST00000412792 311 ntBASIC1.5□□□□□ -2.17
RAB40ALP0C0E4 AC004965.1-201ENST00000413033 213 ntBASIC1.5□□□□□ -2.17
RAB40ALP0C0E4 AL161935.2-201ENST00000414627 60 ntBASIC1.5□□□□□ -2.17
RAB40ALP0C0E4 MCFD2P1-201ENST00000417812 300 ntBASIC1.5□□□□□ -2.17
RAB40ALP0C0E4 AC099513.1-201ENST00000490423 301 ntBASIC1.5□□□□□ -2.17
RAB40ALP0C0E4 RNU6-475P-201ENST00000516073 104 ntBASIC1.5□□□□□ -2.17
RAB40ALP0C0E4 RNU2-56P-201ENST00000516826 190 ntBASIC1.5□□□□□ -2.17
RAB40ALP0C0E4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RAB40ALP0C0E4 AL021879.1-201ENST00000611756 288 ntBASIC1.5□□□□□ -2.17
RAB40ALP0C0E4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.5□□□□□ -2.17
RAB40ALP0C0E4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.5□□□□□ -2.17
RAB40ALP0C0E4 RNU4-50P-201ENST00000364361 141 ntBASIC1.49□□□□□ -2.17
RAB40ALP0C0E4 RNU6-117P-201ENST00000365415 107 ntBASIC1.49□□□□□ -2.17
RAB40ALP0C0E4 Y_RNA.361-201ENST00000365515 120 ntBASIC1.49□□□□□ -2.17
RAB40ALP0C0E4 Y_RNA.458-201ENST00000384240 102 ntBASIC1.49□□□□□ -2.17
RAB40ALP0C0E4 RN7SKP101-201ENST00000411376 320 ntBASIC1.49□□□□□ -2.17
RAB40ALP0C0E4 STAG3L5P-204ENST00000443759 179 ntBASIC1.49□□□□□ -2.17
RAB40ALP0C0E4 MTND4P19-201ENST00000446659 478 ntBASIC1.49□□□□□ -2.17
RAB40ALP0C0E4 RNU6-63P-201ENST00000516690 95 ntBASIC1.49□□□□□ -2.17
RAB40ALP0C0E4 RNU6-341P-201ENST00000516973 96 ntBASIC1.49□□□□□ -2.17
RAB40ALP0C0E4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.49□□□□□ -2.17
RAB40ALP0C0E4 AC040926.1-201ENST00000530195 238 ntBASIC1.49□□□□□ -2.17
RAB40ALP0C0E4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.49□□□□□ -2.17
RAB40ALP0C0E4 AC091178.2-201ENST00000584401 117 ntBASIC1.49□□□□□ -2.17
RAB40ALP0C0E4 AL162424.1-201ENST00000602325 221 ntBASIC1.49□□□□□ -2.17
RAB40ALP0C0E4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.49□□□□□ -2.17
RAB40ALP0C0E4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
RAB40ALP0C0E4 AC091812.1-201ENST00000432235 1948 ntBASIC1.48□□□□□ -2.17
RAB40ALP0C0E4 MTND4P29-201ENST00000503122 1372 ntBASIC1.48□□□□□ -2.17
RAB40ALP0C0E4 AC005592.1-201ENST00000566527 1640 ntBASIC1.48□□□□□ -2.17
RAB40ALP0C0E4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
RAB40ALP0C0E4 RNU6-1123P-201ENST00000362347 106 ntBASIC1.48□□□□□ -2.17
RAB40ALP0C0E4 RNU6-797P-201ENST00000363101 109 ntBASIC1.48□□□□□ -2.17
RAB40ALP0C0E4 Y_RNA.265-201ENST00000364677 108 ntBASIC1.48□□□□□ -2.17
RAB40ALP0C0E4 SNORD1A-201ENST00000364968 72 ntBASIC1.48□□□□□ -2.17
RAB40ALP0C0E4 RNA5SP363-201ENST00000365072 115 ntBASIC1.48□□□□□ -2.17
RAB40ALP0C0E4 SNORD14.1-201ENST00000365609 90 ntBASIC1.48□□□□□ -2.17
RAB40ALP0C0E4 Y_RNA.424-201ENST00000384063 103 ntBASIC1.48□□□□□ -2.17
RAB40ALP0C0E4 Y_RNA.471-201ENST00000384312 102 ntBASIC1.48□□□□□ -2.17
RAB40ALP0C0E4 RNU6-136P-201ENST00000384663 107 ntBASIC1.48□□□□□ -2.17
RAB40ALP0C0E4 Y_RNA.570-201ENST00000384750 101 ntBASIC1.48□□□□□ -2.17
RAB40ALP0C0E4 MIR520G-201ENST00000385064 90 ntBASIC1.48□□□□□ -2.17
RAB40ALP0C0E4 MIR513A1-201ENST00000385138 129 ntBASIC1.48□□□□□ -2.17
RAB40ALP0C0E4 SNORA67.6-201ENST00000391093 99 ntBASIC1.48□□□□□ -2.17
RAB40ALP0C0E4 MIR1302-11-201ENST00000408051 138 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms