Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
SFTPBP07988 RNU6-961P-201ENST00000363893 105 ntBASIC1.21□□□□□ -2.22
SFTPBP07988 RNU6-136P-201ENST00000384663 107 ntBASIC1.21□□□□□ -2.22
SFTPBP07988 MIR873-201ENST00000401120 77 ntBASIC1.21□□□□□ -2.22
SFTPBP07988 MRPS18CP6-201ENST00000423587 223 ntBASIC1.21□□□□□ -2.22
SFTPBP07988 RPL39P38-201ENST00000467018 153 ntBASIC1.21□□□□□ -2.22
SFTPBP07988 PRDX4P1-201ENST00000507189 574 ntBASIC1.21□□□□□ -2.22
SFTPBP07988 RNU6-470P-201ENST00000515954 104 ntBASIC1.21□□□□□ -2.22
SFTPBP07988 RNU6-1278P-201ENST00000516130 107 ntBASIC1.21□□□□□ -2.22
SFTPBP07988 MIR2355-201ENST00000517199 87 ntBASIC1.21□□□□□ -2.22
SFTPBP07988 AC023442.1-201ENST00000531247 422 ntBASIC1.21□□□□□ -2.22
SFTPBP07988 AL161670.1-201ENST00000554348 137 ntBASIC1.21□□□□□ -2.22
SFTPBP07988 SNORA28-201ENST00000606769 126 ntBASIC1.21□□□□□ -2.22
SFTPBP07988 AL355073.2-201ENST00000612106 557 ntBASIC1.21□□□□□ -2.22
SFTPBP07988 AC068647.2-201ENST00000637380 353 ntBASIC1.21□□□□□ -2.22
SFTPBP07988 AC005592.1-201ENST00000566527 1640 ntBASIC1.2□□□□□ -2.22
SFTPBP07988 SNORA1B-201ENST00000362535 133 ntBASIC1.2□□□□□ -2.22
SFTPBP07988 Y_RNA.116-201ENST00000363292 103 ntBASIC1.2□□□□□ -2.22
SFTPBP07988 RNU4-76P-201ENST00000364509 141 ntBASIC1.2□□□□□ -2.22
SFTPBP07988 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.2□□□□□ -2.22
SFTPBP07988 DYNLT3P2-201ENST00000442517 295 ntBASIC1.2□□□□□ -2.22
SFTPBP07988 Y_RNA.653-201ENST00000459091 95 ntBASIC1.2□□□□□ -2.22
SFTPBP07988 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.2□□□□□ -2.22
SFTPBP07988 RNA5SP168-201ENST00000516642 112 ntBASIC1.2□□□□□ -2.22
SFTPBP07988 RNU6-63P-201ENST00000516690 95 ntBASIC1.2□□□□□ -2.22
SFTPBP07988 RNU6-922P-201ENST00000516753 99 ntBASIC1.2□□□□□ -2.22
SFTPBP07988 RNU6-341P-201ENST00000516973 96 ntBASIC1.2□□□□□ -2.22
SFTPBP07988 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.2□□□□□ -2.22
SFTPBP07988 AC055872.1-201ENST00000570978 278 ntBASIC1.2□□□□□ -2.22
SFTPBP07988 AC005828.6-201ENST00000606610 232 ntBASIC1.2□□□□□ -2.22
SFTPBP07988 AC004467.1-201ENST00000615678 330 ntBASIC1.2□□□□□ -2.22
SFTPBP07988 MIR8065-201ENST00000620577 100 ntBASIC1.2□□□□□ -2.22
SFTPBP07988 AC127459.3-201ENST00000624328 466 ntBASIC1.2□□□□□ -2.22
SFTPBP07988 MTND4LP32-201ENST00000636111 270 ntBASIC1.2□□□□□ -2.22
SFTPBP07988 U8.1-201ENST00000362843 134 ntBASIC1.19□□□□□ -2.22
SFTPBP07988 RNU6-117P-201ENST00000365415 107 ntBASIC1.19□□□□□ -2.22
SFTPBP07988 RNU11-5P-201ENST00000391216 129 ntBASIC1.19□□□□□ -2.22
SFTPBP07988 U8.16-201ENST00000391279 133 ntBASIC1.19□□□□□ -2.22
SFTPBP07988 SNRPGP13-201ENST00000442212 177 ntBASIC1.19□□□□□ -2.22
SFTPBP07988 AC233266.1-201ENST00000454518 96 ntBASIC1.19□□□□□ -2.22
SFTPBP07988 OR9P1P-201ENST00000496431 281 ntBASIC1.19□□□□□ -2.22
SFTPBP07988 RNU6-165P-201ENST00000517170 99 ntBASIC1.19□□□□□ -2.22
SFTPBP07988 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.19□□□□□ -2.22
SFTPBP07988 RAB11AP2-201ENST00000545905 639 ntBASIC1.19□□□□□ -2.22
SFTPBP07988 AC008269.2-201ENST00000561915 1105 ntBASIC1.19□□□□□ -2.22
SFTPBP07988 AC242852.1-201ENST00000612151 96 ntBASIC1.19□□□□□ -2.22
SFTPBP07988 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.19□□□□□ -2.22
SFTPBP07988 AC244015.1-201ENST00000622301 99 ntBASIC1.19□□□□□ -2.22
SFTPBP07988 Y_RNA.243-201ENST00000364481 109 ntBASIC1.18□□□□□ -2.22
SFTPBP07988 RNU6-392P-201ENST00000364926 101 ntBASIC1.18□□□□□ -2.22
SFTPBP07988 RNU6-1283P-201ENST00000365314 105 ntBASIC1.18□□□□□ -2.22
SFTPBP07988 Y_RNA.355-201ENST00000365462 98 ntBASIC1.18□□□□□ -2.22
SFTPBP07988 RNU6-1310P-201ENST00000384153 107 ntBASIC1.18□□□□□ -2.22
SFTPBP07988 RNU6-424P-201ENST00000384367 105 ntBASIC1.18□□□□□ -2.22
SFTPBP07988 RNU6-1297P-201ENST00000384415 104 ntBASIC1.18□□□□□ -2.22
SFTPBP07988 Y_RNA.605-201ENST00000410577 105 ntBASIC1.18□□□□□ -2.22
SFTPBP07988 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.18□□□□□ -2.22
SFTPBP07988 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.18□□□□□ -2.22
SFTPBP07988 AC093850.1-201ENST00000454121 251 ntBASIC1.18□□□□□ -2.22
SFTPBP07988 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.18□□□□□ -2.22
SFTPBP07988 snoU13.18-201ENST00000459483 104 ntBASIC1.18□□□□□ -2.22
SFTPBP07988 AL133373.1-201ENST00000497098 94 ntBASIC1.18□□□□□ -2.22
SFTPBP07988 RNU7-4P-201ENST00000516961 62 ntBASIC1.18□□□□□ -2.22
SFTPBP07988 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.18□□□□□ -2.22
SFTPBP07988 MIR4421-201ENST00000578133 69 ntBASIC1.18□□□□□ -2.22
SFTPBP07988 MIR6078-201ENST00000611069 100 ntBASIC1.18□□□□□ -2.22
SFTPBP07988 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SFTPBP07988 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SFTPBP07988 Y_RNA.142-201ENST00000363491 102 ntBASIC1.17□□□□□ -2.22
SFTPBP07988 Y_RNA.796-201ENST00000364268 102 ntBASIC1.17□□□□□ -2.22
SFTPBP07988 Y_RNA.799-201ENST00000364992 102 ntBASIC1.17□□□□□ -2.22
SFTPBP07988 Y_RNA.314-201ENST00000365114 102 ntBASIC1.17□□□□□ -2.22
SFTPBP07988 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.17□□□□□ -2.22
SFTPBP07988 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.17□□□□□ -2.22
SFTPBP07988 RNU2-12P-201ENST00000517216 168 ntBASIC1.17□□□□□ -2.22
SFTPBP07988 AC144568.1-201ENST00000520139 137 ntBASIC1.17□□□□□ -2.22
SFTPBP07988 AP002004.2-201ENST00000531656 154 ntBASIC1.17□□□□□ -2.22
SFTPBP07988 AC005730.3-201ENST00000583067 366 ntBASIC1.17□□□□□ -2.22
SFTPBP07988 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
SFTPBP07988 RNU6-199P-201ENST00000362954 107 ntBASIC1.16□□□□□ -2.22
SFTPBP07988 SNORD115-30-201ENST00000364117 82 ntBASIC1.16□□□□□ -2.22
SFTPBP07988 Y_RNA.259-201ENST00000364619 101 ntBASIC1.16□□□□□ -2.22
SFTPBP07988 MIR562-201ENST00000384894 95 ntBASIC1.16□□□□□ -2.22
SFTPBP07988 RNU5A-5P-201ENST00000411054 116 ntBASIC1.16□□□□□ -2.22
SFTPBP07988 AC096644.2-201ENST00000429278 159 ntBASIC1.16□□□□□ -2.22
SFTPBP07988 SUMO1P2-201ENST00000452524 304 ntBASIC1.16□□□□□ -2.22
SFTPBP07988 RNU6-277P-201ENST00000516272 106 ntBASIC1.16□□□□□ -2.22
SFTPBP07988 RNU6-1096P-201ENST00000517089 102 ntBASIC1.16□□□□□ -2.22
SFTPBP07988 MIR6504-201ENST00000613520 61 ntBASIC1.16□□□□□ -2.22
SFTPBP07988 AC011476.5-201ENST00000615594 130 ntBASIC1.16□□□□□ -2.22
SFTPBP07988 AL353770.2-201ENST00000620024 78 ntBASIC1.16□□□□□ -2.22
SFTPBP07988 AC091895.1-201ENST00000624494 256 ntBASIC1.16□□□□□ -2.22
SFTPBP07988 Y_RNA.101-201ENST00000363154 102 ntBASIC1.15□□□□□ -2.23
SFTPBP07988 SNORD116-29-201ENST00000384516 83 ntBASIC1.15□□□□□ -2.23
SFTPBP07988 MIR559-201ENST00000385188 96 ntBASIC1.15□□□□□ -2.23
SFTPBP07988 FCF1P4-201ENST00000448326 183 ntBASIC1.15□□□□□ -2.23
SFTPBP07988 RNU7-12P-201ENST00000516030 62 ntBASIC1.15□□□□□ -2.23
SFTPBP07988 RNU6-917P-201ENST00000516294 104 ntBASIC1.15□□□□□ -2.23
SFTPBP07988 RNU7-28P-201ENST00000516759 62 ntBASIC1.15□□□□□ -2.23
SFTPBP07988 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms