| APRT | P07741 | CCDC68-202 | ENST00000432185 | 4014 nt | APPRIS P1 TSL 1 (best) BASIC | 1.17 | □□□□□ -2.22 | | |
| APRT | P07741 | PPP2R5A-205 | ENST00000537030 | 1719 nt | TSL 2 BASIC | 1.16 | □□□□□ -2.22 | | |
| APRT | P07741 | MIR410-201 | ENST00000362222 | 80 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| APRT | P07741 | SNORA25.8-201 | ENST00000364831 | 128 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| APRT | P07741 | RNU6-505P-201 | ENST00000384427 | 107 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| APRT | P07741 | RNU11-5P-201 | ENST00000391216 | 129 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| APRT | P07741 | MIR873-201 | ENST00000401120 | 77 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| APRT | P07741 | AC078851.1-201 | ENST00000415918 | 298 nt | TSL 3 BASIC | 1.16 | □□□□□ -2.22 | | |
| APRT | P07741 | AC006159.2-201 | ENST00000421965 | 692 nt | TSL 2 BASIC | 1.16 | □□□□□ -2.22 | | |
| APRT | P07741 | RPL39P38-201 | ENST00000467018 | 153 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| APRT | P07741 | RNU7-12P-201 | ENST00000516030 | 62 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| APRT | P07741 | RNU6-947P-201 | ENST00000516264 | 106 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| APRT | P07741 | SNORA20.3-201 | ENST00000516880 | 132 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| APRT | P07741 | AC100807.1-201 | ENST00000517640 | 552 nt | TSL 5 BASIC | 1.16 | □□□□□ -2.22 | | |
| APRT | P07741 | AC144568.1-201 | ENST00000520139 | 137 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| APRT | P07741 | NKAIN2-205 | ENST00000546092 | 148 nt | TSL 5 BASIC | 1.16 | □□□□□ -2.22 | | |
| APRT | P07741 | AC080078.3-201 | ENST00000605407 | 463 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| APRT | P07741 | AL157834.3-201 | ENST00000615543 | 103 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| APRT | P07741 | 5S_rRNA.13-201 | ENST00000622298 | 123 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| APRT | P07741 | ZNF260-205 | ENST00000593142 | 4047 nt | APPRIS P1 TSL 1 (best) BASIC | 1.15 | □□□□□ -2.22 | | |
| APRT | P07741 | Y_RNA.142-201 | ENST00000363491 | 102 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| APRT | P07741 | RNA5SP99-201 | ENST00000364020 | 114 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| APRT | P07741 | NCOA7-AS1-201 | ENST00000429007 | 501 nt | TSL 3 BASIC | 1.15 | □□□□□ -2.23 | | |
| APRT | P07741 | AC092813.2-201 | ENST00000434540 | 399 nt | TSL 3 BASIC | 1.15 | □□□□□ -2.23 | | |
| APRT | P07741 | RPEP5-201 | ENST00000441137 | 268 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| APRT | P07741 | AL049830.1-201 | ENST00000468034 | 425 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| APRT | P07741 | OR9P1P-201 | ENST00000496431 | 281 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| APRT | P07741 | AC093852.1-201 | ENST00000503587 | 266 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| APRT | P07741 | RNU7-4P-201 | ENST00000516961 | 62 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| APRT | P07741 | AC087518.1-201 | ENST00000524098 | 187 nt | TSL 3 BASIC | 1.15 | □□□□□ -2.23 | | |
| APRT | P07741 | AC005730.3-201 | ENST00000583067 | 366 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| APRT | P07741 | AC122108.2-201 | ENST00000611946 | 526 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| APRT | P07741 | AC011476.5-201 | ENST00000615594 | 130 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| APRT | P07741 | RNU6-199P-201 | ENST00000362954 | 107 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| APRT | P07741 | Y_RNA.243-201 | ENST00000364481 | 109 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| APRT | P07741 | Y_RNA.259-201 | ENST00000364619 | 101 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| APRT | P07741 | RNU6-939P-201 | ENST00000384634 | 107 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| APRT | P07741 | RNA5SP511-201 | ENST00000410487 | 115 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| APRT | P07741 | Y_RNA.621-201 | ENST00000411065 | 96 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| APRT | P07741 | RBMX2P4-201 | ENST00000441256 | 376 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| APRT | P07741 | RNU6-1096P-201 | ENST00000517089 | 102 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| APRT | P07741 | RNU6-165P-201 | ENST00000517170 | 99 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| APRT | P07741 | AP002004.2-201 | ENST00000531656 | 154 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| APRT | P07741 | RAB11AP2-201 | ENST00000545905 | 639 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| APRT | P07741 | RNU6-117P-201 | ENST00000365415 | 107 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| APRT | P07741 | RNU6-708P-201 | ENST00000384217 | 107 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| APRT | P07741 | RNU6-424P-201 | ENST00000384367 | 105 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| APRT | P07741 | RNU6-1297P-201 | ENST00000384415 | 104 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| APRT | P07741 | AP1B1P2-201 | ENST00000416196 | 106 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| APRT | P07741 | BTF3P4-201 | ENST00000418852 | 495 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| APRT | P07741 | HSPE1P13-201 | ENST00000451143 | 297 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| APRT | P07741 | AL844175.1-201 | ENST00000455153 | 323 nt | TSL 5 BASIC | 1.13 | □□□□□ -2.23 | | |
| APRT | P07741 | RNU6-1116P-201 | ENST00000517269 | 99 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| APRT | P07741 | AC006380.1-201 | ENST00000603598 | 186 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| APRT | P07741 | AC084781.2-201 | ENST00000615568 | 161 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| APRT | P07741 | KIAA1551-201 | ENST00000312561 | 6230 nt | APPRIS P1 TSL 1 (best) BASIC | 1.13 | □□□□□ -2.23 | | |
| APRT | P07741 | C9orf84-201 | ENST00000318737 | 4661 nt | APPRIS P3 TSL 1 (best) BASIC | 1.13 | □□□□□ -2.23 | | |
| APRT | P07741 | Y_RNA.101-201 | ENST00000363154 | 102 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| APRT | P07741 | RNU6-626P-201 | ENST00000363354 | 107 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| APRT | P07741 | RNU6-324P-201 | ENST00000363957 | 106 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| APRT | P07741 | Y_RNA.384-201 | ENST00000383909 | 102 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| APRT | P07741 | Y_RNA.387-201 | ENST00000383918 | 102 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| APRT | P07741 | MIR562-201 | ENST00000384894 | 95 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| APRT | P07741 | MIR628-201 | ENST00000385229 | 95 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| APRT | P07741 | AC104332.1-201 | ENST00000440471 | 797 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| APRT | P07741 | FCF1P4-201 | ENST00000448326 | 183 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| APRT | P07741 | RNU7-40P-201 | ENST00000516397 | 64 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| APRT | P07741 | RNU6-1337P-201 | ENST00000516525 | 95 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| APRT | P07741 | RNU7-28P-201 | ENST00000516759 | 62 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| APRT | P07741 | RNU6-699P-201 | ENST00000517081 | 110 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| APRT | P07741 | AC084882.1-201 | ENST00000561254 | 555 nt | TSL 4 BASIC | 1.12 | □□□□□ -2.23 | | |
| APRT | P07741 | AL513534.2-201 | ENST00000603836 | 250 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| APRT | P07741 | AC005828.6-201 | ENST00000606610 | 232 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| APRT | P07741 | AC133104.2-201 | ENST00000615272 | 193 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| APRT | P07741 | LINC01068-202 | ENST00000620874 | 626 nt | TSL 3 BASIC | 1.12 | □□□□□ -2.23 | | |
| APRT | P07741 | C9orf84-204 | ENST00000394777 | 4955 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.12 | □□□□□ -2.23 | | |
| APRT | P07741 | MIR378A-201 | ENST00000362177 | 66 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| APRT | P07741 | RNU4-41P-201 | ENST00000364426 | 143 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| APRT | P07741 | RNU6-1080P-201 | ENST00000383982 | 107 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| APRT | P07741 | RNU6-20P-201 | ENST00000384106 | 107 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| APRT | P07741 | MIR520G-201 | ENST00000385064 | 90 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| APRT | P07741 | RNA5SP482-201 | ENST00000391269 | 118 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| APRT | P07741 | CEP57L1P1-201 | ENST00000430943 | 1201 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| APRT | P07741 | Z98949.2-201 | ENST00000440996 | 144 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| APRT | P07741 | ELOCP24-201 | ENST00000456370 | 334 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| APRT | P07741 | AL163540.1-201 | ENST00000485382 | 386 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| APRT | P07741 | AC108729.3-201 | ENST00000513484 | 108 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| APRT | P07741 | RNU2-12P-201 | ENST00000517216 | 168 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| APRT | P07741 | MIR4659A-201 | ENST00000580269 | 81 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| APRT | P07741 | AL117336.2-201 | ENST00000602435 | 335 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| APRT | P07741 | U2.1-201 | ENST00000618978 | 145 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| APRT | P07741 | LINC01359-207 | ENST00000634799 | 487 nt | TSL 5 BASIC | 1.11 | □□□□□ -2.23 | | |
| APRT | P07741 | MIR1302-1-201 | ENST00000637932 | 143 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| APRT | P07741 | FAM135A-203 | ENST00000370479 | 5930 nt | TSL 1 (best) BASIC | 1.11 | □□□□□ -2.23 | | |
| APRT | P07741 | SNORD115-30-201 | ENST00000364117 | 82 nt | BASIC | 1.1 | □□□□□ -2.23 | | |
| APRT | P07741 | MIR222-201 | ENST00000384992 | 110 nt | BASIC | 1.1 | □□□□□ -2.23 | | |
| APRT | P07741 | RNU5A-5P-201 | ENST00000411054 | 116 nt | BASIC | 1.1 | □□□□□ -2.23 | | |
| APRT | P07741 | AL354751.2-201 | ENST00000415471 | 210 nt | BASIC | 1.1 | □□□□□ -2.23 | | |
| APRT | P07741 | SUMO1P2-201 | ENST00000452524 | 304 nt | BASIC | 1.1 | □□□□□ -2.23 | | |
| APRT | P07741 | NMTRQ-TTG12-1-201 | ENST00000467595 | 72 nt | BASIC | 1.1 | □□□□□ -2.23 | | |