Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 MIR4762-201ENST00000585261 75 ntBASIC-1.41□□□□□ -2.64
HMGN1P05114 RNU6-266P-201ENST00000364225 107 ntBASIC-1.42□□□□□ -2.64
HMGN1P05114 SNORA63C-201ENST00000364578 129 ntBASIC-1.42□□□□□ -2.64
HMGN1P05114 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.42□□□□□ -2.64
HMGN1P05114 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.42□□□□□ -2.64
HMGN1P05114 SNORD28B-201ENST00000390993 75 ntBASIC-1.42□□□□□ -2.64
HMGN1P05114 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.42□□□□□ -2.64
HMGN1P05114 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-1.42□□□□□ -2.64
HMGN1P05114 EPS15P1-201ENST00000448836 336 ntBASIC-1.42□□□□□ -2.64
HMGN1P05114 MIR18B-201ENST00000454574 71 ntBASIC-1.42□□□□□ -2.64
HMGN1P05114 MTND4P33-201ENST00000556706 766 ntBASIC-1.42□□□□□ -2.64
HMGN1P05114 AC006380.1-201ENST00000603598 186 ntBASIC-1.42□□□□□ -2.64
HMGN1P05114 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.43□□□□□ -2.64
HMGN1P05114 RNU6-407P-201ENST00000365280 104 ntBASIC-1.43□□□□□ -2.64
HMGN1P05114 Y_RNA.466-201ENST00000384294 113 ntBASIC-1.43□□□□□ -2.64
HMGN1P05114 SNORA51.10-201ENST00000384418 136 ntBASIC-1.43□□□□□ -2.64
HMGN1P05114 RNU6-809P-201ENST00000384461 107 ntBASIC-1.43□□□□□ -2.64
HMGN1P05114 RNU6-125P-201ENST00000384505 107 ntBASIC-1.43□□□□□ -2.64
HMGN1P05114 MIR873-201ENST00000401120 77 ntBASIC-1.43□□□□□ -2.64
HMGN1P05114 MIR548L-201ENST00000408303 86 ntBASIC-1.43□□□□□ -2.64
HMGN1P05114 AC018865.2-201ENST00000423631 129 ntBASIC-1.43□□□□□ -2.64
HMGN1P05114 AC107297.1-201ENST00000459991 176 ntBASIC-1.43□□□□□ -2.64
HMGN1P05114 RNU6-135P-201ENST00000516769 101 ntBASIC-1.43□□□□□ -2.64
HMGN1P05114 MIR548AD-201ENST00000584780 82 ntBASIC-1.43□□□□□ -2.64
HMGN1P05114 AL121992.2-201ENST00000606262 256 ntBASIC-1.43□□□□□ -2.64
HMGN1P05114 RMST_3.1-201ENST00000611651 109 ntBASIC-1.43□□□□□ -2.64
HMGN1P05114 MIR655-201ENST00000362159 97 ntBASIC-1.44□□□□□ -2.64
HMGN1P05114 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.44□□□□□ -2.64
HMGN1P05114 SNORD95.1-201ENST00000364099 68 ntBASIC-1.44□□□□□ -2.64
HMGN1P05114 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.44□□□□□ -2.64
HMGN1P05114 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.44□□□□□ -2.64
HMGN1P05114 RNU6-434P-201ENST00000384376 107 ntBASIC-1.44□□□□□ -2.64
HMGN1P05114 RNU6-393P-201ENST00000384475 107 ntBASIC-1.44□□□□□ -2.64
HMGN1P05114 SNORA75.1-201ENST00000391130 148 ntBASIC-1.44□□□□□ -2.64
HMGN1P05114 MRPL42P2-201ENST00000403169 426 ntBASIC-1.44□□□□□ -2.64
HMGN1P05114 AC091885.1-201ENST00000506658 268 ntBASIC-1.44□□□□□ -2.64
HMGN1P05114 RNA5SP20-201ENST00000515976 84 ntBASIC-1.44□□□□□ -2.64
HMGN1P05114 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.44□□□□□ -2.64
HMGN1P05114 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.44□□□□□ -2.64
HMGN1P05114 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.44□□□□□ -2.64
HMGN1P05114 LRRC34P1-201ENST00000542742 915 ntBASIC-1.44□□□□□ -2.64
HMGN1P05114 AC008507.2-201ENST00000588402 1176 ntBASIC-1.44□□□□□ -2.64
HMGN1P05114 AC016597.2-201ENST00000613256 341 ntBASIC-1.44□□□□□ -2.64
HMGN1P05114 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.45□□□□□ -2.64
HMGN1P05114 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.45□□□□□ -2.64
HMGN1P05114 MIR196A1-201ENST00000388006 70 ntBASIC-1.45□□□□□ -2.64
HMGN1P05114 RPL21P38-201ENST00000418090 167 ntBASIC-1.45□□□□□ -2.64
HMGN1P05114 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.45□□□□□ -2.64
HMGN1P05114 HMGN2P32-201ENST00000444648 269 ntBASIC-1.45□□□□□ -2.64
HMGN1P05114 RNU7-185P-201ENST00000459215 60 ntBASIC-1.45□□□□□ -2.64
HMGN1P05114 AF186996.7-201ENST00000492781 209 ntBASIC-1.45□□□□□ -2.64
HMGN1P05114 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.45□□□□□ -2.64
HMGN1P05114 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.45□□□□□ -2.64
HMGN1P05114 AC022784.5-201ENST00000522241 437 ntBASIC-1.45□□□□□ -2.64
HMGN1P05114 FGF7P1-201ENST00000582820 288 ntBASIC-1.45□□□□□ -2.64
HMGN1P05114 U7.6-201ENST00000610841 64 ntBASIC-1.45□□□□□ -2.64
HMGN1P05114 MTND5P17-201ENST00000418405 1603 ntBASIC-1.45□□□□□ -2.64
HMGN1P05114 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.46□□□□□ -2.64
HMGN1P05114 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.46□□□□□ -2.64
HMGN1P05114 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.46□□□□□ -2.64
HMGN1P05114 SNORA20B-201ENST00000384220 132 ntBASIC-1.46□□□□□ -2.64
HMGN1P05114 MIR215-201ENST00000384858 110 ntBASIC-1.46□□□□□ -2.64
HMGN1P05114 RNU4-63P-201ENST00000411313 118 ntBASIC-1.46□□□□□ -2.64
HMGN1P05114 AC244250.2-201ENST00000418731 148 ntBASIC-1.46□□□□□ -2.64
HMGN1P05114 MTCO2P11-201ENST00000431069 680 ntBASIC-1.46□□□□□ -2.64
HMGN1P05114 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.46□□□□□ -2.64
HMGN1P05114 AC112204.1-201ENST00000502591 103 ntBASIC-1.46□□□□□ -2.64
HMGN1P05114 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.46□□□□□ -2.64
HMGN1P05114 RNA5SP47-201ENST00000517230 109 ntBASIC-1.46□□□□□ -2.64
HMGN1P05114 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.46□□□□□ -2.64
HMGN1P05114 AC090617.3-201ENST00000573670 475 ntBASIC-1.46□□□□□ -2.64
HMGN1P05114 RNU1-29P-201ENST00000606574 126 ntBASIC-1.46□□□□□ -2.64
HMGN1P05114 AC009159.2-201ENST00000617603 606 ntBASIC-1.46□□□□□ -2.64
HMGN1P05114 AL512427.1-201ENST00000618593 349 ntBASIC-1.46□□□□□ -2.64
HMGN1P05114 AC013437.2-201ENST00000639587 677 ntBASIC-1.46□□□□□ -2.64
HMGN1P05114 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.47□□□□□ -2.64
HMGN1P05114 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.47□□□□□ -2.64
HMGN1P05114 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.47□□□□□ -2.64
HMGN1P05114 MIR570-201ENST00000384917 97 ntBASIC-1.47□□□□□ -2.64
HMGN1P05114 AL358934.1-201ENST00000432346 324 ntBASIC-1.47□□□□□ -2.64
HMGN1P05114 AL359672.1-201ENST00000442302 409 ntBASIC-1.47□□□□□ -2.64
HMGN1P05114 AC109327.2-201ENST00000448339 378 ntBASIC-1.47□□□□□ -2.64
HMGN1P05114 AC116353.2-201ENST00000505332 712 ntBASIC-1.47□□□□□ -2.64
HMGN1P05114 AC010424.1-201ENST00000506336 297 ntBASIC-1.47□□□□□ -2.64
HMGN1P05114 RPL39P5-202ENST00000512505 151 ntBASIC-1.47□□□□□ -2.64
HMGN1P05114 SNORD45.4-201ENST00000516629 73 ntBASIC-1.47□□□□□ -2.64
HMGN1P05114 AP001328.1-201ENST00000528550 176 ntBASIC-1.47□□□□□ -2.64
HMGN1P05114 AC006600.1-201ENST00000572529 153 ntBASIC-1.47□□□□□ -2.64
HMGN1P05114 AC010332.2-201ENST00000613083 1904 ntBASIC-1.47□□□□□ -2.64
HMGN1P05114 RNY1P12-201ENST00000364251 105 ntBASIC-1.48□□□□□ -2.65
HMGN1P05114 RNU2-69P-201ENST00000516061 100 ntBASIC-1.48□□□□□ -2.65
HMGN1P05114 SNORA25.14-201ENST00000516481 132 ntBASIC-1.48□□□□□ -2.65
HMGN1P05114 MTND2P32-201ENST00000521584 1038 ntBASIC-1.48□□□□□ -2.65
HMGN1P05114 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.48□□□□□ -2.65
HMGN1P05114 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.48□□□□□ -2.65
HMGN1P05114 MIR3681-201ENST00000580089 72 ntBASIC-1.48□□□□□ -2.65
HMGN1P05114 AC022306.2-201ENST00000617563 647 ntBASIC-1.48□□□□□ -2.65
HMGN1P05114 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.49□□□□□ -2.65
HMGN1P05114 SNORD115.1-201ENST00000391109 76 ntBASIC-1.49□□□□□ -2.65
HMGN1P05114 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-1.49□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms