Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 SNORA31.26-201ENST00000517250 137 ntBASIC2.53□□□□□ -2
COL3A1P02461 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.53□□□□□ -2
COL3A1P02461 AC112693.2-201ENST00000556538 232 ntBASIC2.53□□□□□ -2
COL3A1P02461 Y_RNA.802-201ENST00000614892 130 ntBASIC2.53□□□□□ -2
COL3A1P02461 MIR3199-2-201ENST00000636243 86 ntBASIC2.53□□□□□ -2
COL3A1P02461 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
COL3A1P02461 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
COL3A1P02461 FAM35CP-201ENST00000554755 2470 ntBASIC2.53□□□□□ -2
COL3A1P02461 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.53□□□□□ -2
COL3A1P02461 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
COL3A1P02461 RNU6-454P-201ENST00000364292 107 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 snoU2_19.4-201ENST00000364329 80 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 RNU6-153P-201ENST00000364422 104 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 RNA5SP37-201ENST00000365420 130 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 Y_RNA.355-201ENST00000365462 98 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 SNORA20-201ENST00000384662 132 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 SNORD37.2-201ENST00000391075 66 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 CBX3P9-201ENST00000402326 552 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 AP000873.1-201ENST00000463987 400 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 RPS29P20-201ENST00000489592 171 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 SNORA31.15-201ENST00000516771 132 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 ACA59.2-201ENST00000517061 156 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 AC109810.1-201ENST00000534066 224 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 MIR4255-201ENST00000579351 72 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.52□□□□□ -2.01
COL3A1P02461 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.52□□□□□ -2.01
COL3A1P02461 Y_RNA.24-201ENST00000362508 103 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 Y_RNA.140-201ENST00000363474 103 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 Y_RNA.172-201ENST00000363765 102 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 RNA5SP138-201ENST00000365098 114 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 RNU6-1056P-201ENST00000383996 107 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 SNORA1.3-201ENST00000384676 136 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 MIR607-201ENST00000385241 96 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 MIR616-201ENST00000385293 97 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 SNORA26.5-201ENST00000391215 123 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 AL355497.1-201ENST00000406262 551 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 CYCSP48-201ENST00000417124 323 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.52□□□□□ -2.01
COL3A1P02461 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.52□□□□□ -2.01
COL3A1P02461 RPS27P26-201ENST00000494583 239 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 RNU5F-2P-201ENST00000516066 82 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 snoU13.31-201ENST00000607291 104 ntBASIC2.52□□□□□ -2.01
COL3A1P02461 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.52□□□□□ -2.01
COL3A1P02461 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
COL3A1P02461 RNU4-10P-201ENST00000364383 140 ntBASIC2.51□□□□□ -2.01
COL3A1P02461 Y_RNA.415-201ENST00000384012 112 ntBASIC2.51□□□□□ -2.01
COL3A1P02461 Y_RNA.420-201ENST00000384043 110 ntBASIC2.51□□□□□ -2.01
COL3A1P02461 RNU6-321P-201ENST00000410912 106 ntBASIC2.51□□□□□ -2.01
COL3A1P02461 AC006461.1-201ENST00000412637 326 ntBASIC2.51□□□□□ -2.01
COL3A1P02461 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
COL3A1P02461 AL714022.1-201ENST00000439897 151 ntBASIC2.51□□□□□ -2.01
COL3A1P02461 AL121914.1-201ENST00000450188 156 ntBASIC2.51□□□□□ -2.01
COL3A1P02461 RPL31P41-201ENST00000477967 372 ntBASIC2.51□□□□□ -2.01
COL3A1P02461 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.51□□□□□ -2.01
COL3A1P02461 AC108729.3-201ENST00000513484 108 ntBASIC2.51□□□□□ -2.01
COL3A1P02461 RNU6-344P-201ENST00000516635 111 ntBASIC2.51□□□□□ -2.01
COL3A1P02461 MIR3646-201ENST00000578301 84 ntBASIC2.51□□□□□ -2.01
COL3A1P02461 SNORD11B-201ENST00000607707 90 ntBASIC2.51□□□□□ -2.01
COL3A1P02461 AC011603.4-201ENST00000611325 277 ntBASIC2.51□□□□□ -2.01
COL3A1P02461 MIR6844-201ENST00000637122 62 ntBASIC2.51□□□□□ -2.01
COL3A1P02461 AC134026.1-201ENST00000623249 2239 ntBASIC2.51□□□□□ -2.01
COL3A1P02461 AC110774.1-201ENST00000623567 2018 ntBASIC2.5□□□□□ -2.01
COL3A1P02461 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL3A1P02461 AC007256.1-201ENST00000392253 2765 ntBASIC2.5□□□□□ -2.01
COL3A1P02461 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL3A1P02461 RNU6-600P-201ENST00000362524 99 ntBASIC2.5□□□□□ -2.01
COL3A1P02461 Y_RNA.118-201ENST00000363300 101 ntBASIC2.5□□□□□ -2.01
COL3A1P02461 Y_RNA.243-201ENST00000364481 109 ntBASIC2.5□□□□□ -2.01
COL3A1P02461 RNA5SP189-201ENST00000364920 115 ntBASIC2.5□□□□□ -2.01
COL3A1P02461 Y_RNA.341-201ENST00000365341 102 ntBASIC2.5□□□□□ -2.01
COL3A1P02461 Y_RNA.368-201ENST00000365547 113 ntBASIC2.5□□□□□ -2.01
COL3A1P02461 RNU6-144P-201ENST00000383951 107 ntBASIC2.5□□□□□ -2.01
COL3A1P02461 SNORA72.4-201ENST00000384174 132 ntBASIC2.5□□□□□ -2.01
COL3A1P02461 Y_RNA.456-201ENST00000384232 111 ntBASIC2.5□□□□□ -2.01
COL3A1P02461 MIR489-201ENST00000384923 84 ntBASIC2.5□□□□□ -2.01
COL3A1P02461 AL031003.1-201ENST00000404229 172 ntBASIC2.5□□□□□ -2.01
COL3A1P02461 AC108667.1-201ENST00000428618 249 ntBASIC2.5□□□□□ -2.01
COL3A1P02461 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.5□□□□□ -2.01
COL3A1P02461 RNU6-1007P-201ENST00000516586 107 ntBASIC2.5□□□□□ -2.01
COL3A1P02461 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.5□□□□□ -2.01
COL3A1P02461 AC002984.1-201ENST00000591692 448 ntBASIC2.5□□□□□ -2.01
COL3A1P02461 AL391903.3-201ENST00000612158 163 ntBASIC2.5□□□□□ -2.01
COL3A1P02461 PCGEM1.1-201ENST00000613431 131 ntBASIC2.5□□□□□ -2.01
COL3A1P02461 TCL6_2.1-201ENST00000615162 119 ntBASIC2.5□□□□□ -2.01
COL3A1P02461 MIR8070-201ENST00000616510 88 ntBASIC2.5□□□□□ -2.01
COL3A1P02461 MIR3658-201ENST00000636291 56 ntBASIC2.5□□□□□ -2.01
COL3A1P02461 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
COL3A1P02461 MIR526A2-201ENST00000390198 65 ntBASIC2.49□□□□□ -2.01
COL3A1P02461 RNU6-1228P-201ENST00000391014 107 ntBASIC2.49□□□□□ -2.01
COL3A1P02461 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
COL3A1P02461 AL365496.1-201ENST00000426885 215 ntBASIC2.49□□□□□ -2.01
COL3A1P02461 AL441985.1-201ENST00000457727 251 ntBASIC2.49□□□□□ -2.01
COL3A1P02461 SNRPGP3-201ENST00000469405 227 ntBASIC2.49□□□□□ -2.01
COL3A1P02461 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.49□□□□□ -2.01
COL3A1P02461 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.49□□□□□ -2.01
COL3A1P02461 SCARNA8-201ENST00000515924 131 ntBASIC2.49□□□□□ -2.01
COL3A1P02461 RN7SKP179-201ENST00000516126 217 ntBASIC2.49□□□□□ -2.01
COL3A1P02461 RNU6-453P-201ENST00000516819 85 ntBASIC2.49□□□□□ -2.01
COL3A1P02461 AC006199.1-201ENST00000548728 219 ntBASIC2.49□□□□□ -2.01
COL3A1P02461 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms