Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CHEK2P4-201ENST00000450340 246 ntBASIC1.45□□□□□ -2.18
PDGFBP01127 RPS29P23-201ENST00000458635 123 ntBASIC1.45□□□□□ -2.18
PDGFBP01127 SNORD65B-201ENST00000459126 73 ntBASIC1.45□□□□□ -2.18
PDGFBP01127 AC079140.2-201ENST00000506193 142 ntBASIC1.45□□□□□ -2.18
PDGFBP01127 RN7SKP49-201ENST00000516675 260 ntBASIC1.45□□□□□ -2.18
PDGFBP01127 RNU1-142P-201ENST00000516682 145 ntBASIC1.45□□□□□ -2.18
PDGFBP01127 AC023442.1-201ENST00000531247 422 ntBASIC1.45□□□□□ -2.18
PDGFBP01127 AC006600.1-201ENST00000572529 153 ntBASIC1.45□□□□□ -2.18
PDGFBP01127 MIR151B-201ENST00000584249 96 ntBASIC1.45□□□□□ -2.18
PDGFBP01127 AP001485.1-201ENST00000604799 199 ntBASIC1.45□□□□□ -2.18
PDGFBP01127 MIR6788-201ENST00000618842 66 ntBASIC1.45□□□□□ -2.18
PDGFBP01127 U2.1-201ENST00000618978 145 ntBASIC1.45□□□□□ -2.18
PDGFBP01127 AC095038.3-201ENST00000634439 195 ntBASIC1.45□□□□□ -2.18
PDGFBP01127 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.45□□□□□ -2.18
PDGFBP01127 MIR6767-201ENST00000637302 66 ntBASIC1.45□□□□□ -2.18
PDGFBP01127 AL161722.3-201ENST00000605789 2983 ntBASIC1.45□□□□□ -2.18
PDGFBP01127 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
PDGFBP01127 MIR369-201ENST00000362155 70 ntBASIC1.44□□□□□ -2.18
PDGFBP01127 MIR302D-201ENST00000362275 68 ntBASIC1.44□□□□□ -2.18
PDGFBP01127 RNU4-79P-201ENST00000362764 141 ntBASIC1.44□□□□□ -2.18
PDGFBP01127 RNU6-308P-201ENST00000390957 107 ntBASIC1.44□□□□□ -2.18
PDGFBP01127 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.44□□□□□ -2.18
PDGFBP01127 AP002001.1-203ENST00000534002 267 ntBASIC1.44□□□□□ -2.18
PDGFBP01127 AC092447.9-201ENST00000603395 144 ntBASIC1.44□□□□□ -2.18
PDGFBP01127 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.43□□□□□ -2.18
PDGFBP01127 RNU6-961P-201ENST00000363893 105 ntBASIC1.43□□□□□ -2.18
PDGFBP01127 RNU6-1065P-201ENST00000384513 106 ntBASIC1.43□□□□□ -2.18
PDGFBP01127 MT-TD-201ENST00000387419 68 ntBASIC1.43□□□□□ -2.18
PDGFBP01127 MTND1P14-201ENST00000427400 950 ntBASIC1.43□□□□□ -2.18
PDGFBP01127 RAB28P5-201ENST00000427490 651 ntBASIC1.43□□□□□ -2.18
PDGFBP01127 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.43□□□□□ -2.18
PDGFBP01127 RNU7-34P-201ENST00000459394 64 ntBASIC1.43□□□□□ -2.18
PDGFBP01127 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.43□□□□□ -2.18
PDGFBP01127 AC024995.1-201ENST00000523014 93 ntBASIC1.43□□□□□ -2.18
PDGFBP01127 AC006157.1-201ENST00000611750 366 ntBASIC1.43□□□□□ -2.18
PDGFBP01127 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
PDGFBP01127 MIR3674-201ENST00000636576 68 ntBASIC1.43□□□□□ -2.18
PDGFBP01127 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
PDGFBP01127 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
PDGFBP01127 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
PDGFBP01127 Y_RNA.30-201ENST00000362572 97 ntBASIC1.42□□□□□ -2.18
PDGFBP01127 SNORD1A-201ENST00000364968 72 ntBASIC1.42□□□□□ -2.18
PDGFBP01127 Y_RNA.315-201ENST00000365117 102 ntBASIC1.42□□□□□ -2.18
PDGFBP01127 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.42□□□□□ -2.18
PDGFBP01127 SNORA20B-201ENST00000384220 132 ntBASIC1.42□□□□□ -2.18
PDGFBP01127 RNU6-950P-201ENST00000384651 107 ntBASIC1.42□□□□□ -2.18
PDGFBP01127 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.42□□□□□ -2.18
PDGFBP01127 AC099799.1-201ENST00000439809 192 ntBASIC1.42□□□□□ -2.18
PDGFBP01127 AL606517.2-201ENST00000442855 241 ntBASIC1.42□□□□□ -2.18
PDGFBP01127 AC055872.1-201ENST00000570978 278 ntBASIC1.42□□□□□ -2.18
PDGFBP01127 MIR4438-201ENST00000585271 93 ntBASIC1.42□□□□□ -2.18
PDGFBP01127 AL359075.3-201ENST00000613288 217 ntBASIC1.42□□□□□ -2.18
PDGFBP01127 AC004467.1-201ENST00000615678 330 ntBASIC1.42□□□□□ -2.18
PDGFBP01127 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
PDGFBP01127 RNU6-1264P-201ENST00000383891 107 ntBASIC1.41□□□□□ -2.18
PDGFBP01127 Y_RNA.496-201ENST00000384444 101 ntBASIC1.41□□□□□ -2.18
PDGFBP01127 AL355796.1-201ENST00000406706 323 ntBASIC1.41□□□□□ -2.18
PDGFBP01127 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.41□□□□□ -2.18
PDGFBP01127 TOMM22P2-201ENST00000430735 237 ntBASIC1.41□□□□□ -2.18
PDGFBP01127 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.41□□□□□ -2.18
PDGFBP01127 AC027119.1-201ENST00000440877 241 ntBASIC1.41□□□□□ -2.18
PDGFBP01127 SNRPGP13-201ENST00000442212 177 ntBASIC1.41□□□□□ -2.18
PDGFBP01127 AC099513.1-201ENST00000490423 301 ntBASIC1.41□□□□□ -2.18
PDGFBP01127 MIR4709-201ENST00000577272 72 ntBASIC1.41□□□□□ -2.18
PDGFBP01127 MIR3937-201ENST00000580135 106 ntBASIC1.41□□□□□ -2.18
PDGFBP01127 MIR4659A-201ENST00000580269 81 ntBASIC1.41□□□□□ -2.18
PDGFBP01127 AC073413.2-201ENST00000604332 360 ntBASIC1.41□□□□□ -2.18
PDGFBP01127 PRR13P7-201ENST00000605538 430 ntBASIC1.41□□□□□ -2.18
PDGFBP01127 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.41□□□□□ -2.18
PDGFBP01127 AL008636.1-201ENST00000625038 1018 ntBASIC1.41□□□□□ -2.18
PDGFBP01127 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
PDGFBP01127 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.18
PDGFBP01127 RNU6-454P-201ENST00000364292 107 ntBASIC1.4□□□□□ -2.19
PDGFBP01127 RNA5SP363-201ENST00000365072 115 ntBASIC1.4□□□□□ -2.19
PDGFBP01127 AC022028.1-201ENST00000412054 408 ntBASIC1.4□□□□□ -2.19
PDGFBP01127 AL161935.2-201ENST00000414627 60 ntBASIC1.4□□□□□ -2.19
PDGFBP01127 AF228730.4-201ENST00000421457 183 ntBASIC1.4□□□□□ -2.19
PDGFBP01127 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.4□□□□□ -2.19
PDGFBP01127 NDUFB4P10-201ENST00000452541 359 ntBASIC1.4□□□□□ -2.19
PDGFBP01127 AC004223.1-201ENST00000479840 271 ntBASIC1.4□□□□□ -2.19
PDGFBP01127 CYCSP23-201ENST00000519781 313 ntBASIC1.4□□□□□ -2.19
PDGFBP01127 AC015688.6-201ENST00000577737 104 ntBASIC1.4□□□□□ -2.19
PDGFBP01127 AC007485.1-201ENST00000616755 206 ntBASIC1.4□□□□□ -2.19
PDGFBP01127 AC138305.3-201ENST00000624988 240 ntBASIC1.4□□□□□ -2.19
PDGFBP01127 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.4□□□□□ -2.19
PDGFBP01127 MTND4P29-201ENST00000503122 1372 ntBASIC1.39□□□□□ -2.19
PDGFBP01127 Y_RNA.5-201ENST00000362334 102 ntBASIC1.39□□□□□ -2.19
PDGFBP01127 Y_RNA.124-201ENST00000363339 93 ntBASIC1.39□□□□□ -2.19
PDGFBP01127 RNU6-626P-201ENST00000363354 107 ntBASIC1.39□□□□□ -2.19
PDGFBP01127 RNU6-324P-201ENST00000363957 106 ntBASIC1.39□□□□□ -2.19
PDGFBP01127 Y_RNA.267-201ENST00000364679 109 ntBASIC1.39□□□□□ -2.19
PDGFBP01127 Y_RNA.393-201ENST00000383936 102 ntBASIC1.39□□□□□ -2.19
PDGFBP01127 RNU6-20P-201ENST00000384106 107 ntBASIC1.39□□□□□ -2.19
PDGFBP01127 SNORD26-201ENST00000384147 75 ntBASIC1.39□□□□□ -2.19
PDGFBP01127 MRPL35P1-201ENST00000404272 572 ntBASIC1.39□□□□□ -2.19
PDGFBP01127 RN7SKP51-201ENST00000410781 304 ntBASIC1.39□□□□□ -2.19
PDGFBP01127 AL160004.2-201ENST00000432935 350 ntBASIC1.39□□□□□ -2.19
PDGFBP01127 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.39□□□□□ -2.19
PDGFBP01127 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.39□□□□□ -2.19
PDGFBP01127 AC010598.1-201ENST00000510378 103 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms