Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 MIR6078-201ENST00000611069 100 ntBASIC1.37□□□□□ -2.19
CSDE1O75534 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CSDE1O75534 RNU4-73P-201ENST00000363164 141 ntBASIC1.36□□□□□ -2.19
CSDE1O75534 RNY3P4-201ENST00000384428 101 ntBASIC1.36□□□□□ -2.19
CSDE1O75534 RNU6-376P-201ENST00000384731 106 ntBASIC1.36□□□□□ -2.19
CSDE1O75534 MIR499A-201ENST00000384903 122 ntBASIC1.36□□□□□ -2.19
CSDE1O75534 MT-TD-201ENST00000387419 68 ntBASIC1.36□□□□□ -2.19
CSDE1O75534 RNU11-5P-201ENST00000391216 129 ntBASIC1.36□□□□□ -2.19
CSDE1O75534 MRPL42P3-201ENST00000401492 326 ntBASIC1.36□□□□□ -2.19
CSDE1O75534 MIR1276-201ENST00000408707 83 ntBASIC1.36□□□□□ -2.19
CSDE1O75534 RN7SKP200-201ENST00000410564 320 ntBASIC1.36□□□□□ -2.19
CSDE1O75534 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.36□□□□□ -2.19
CSDE1O75534 RPS27P1-201ENST00000450552 247 ntBASIC1.36□□□□□ -2.19
CSDE1O75534 RNA5SP20-201ENST00000515976 84 ntBASIC1.36□□□□□ -2.19
CSDE1O75534 RNA5SP102-201ENST00000516865 106 ntBASIC1.36□□□□□ -2.19
CSDE1O75534 AC019176.1-201ENST00000518519 225 ntBASIC1.36□□□□□ -2.19
CSDE1O75534 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.36□□□□□ -2.19
CSDE1O75534 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.36□□□□□ -2.19
CSDE1O75534 RPL21P9-201ENST00000556149 474 ntBASIC1.36□□□□□ -2.19
CSDE1O75534 AC006600.1-201ENST00000572529 153 ntBASIC1.36□□□□□ -2.19
CSDE1O75534 MIR4795-201ENST00000584182 89 ntBASIC1.36□□□□□ -2.19
CSDE1O75534 PRR13P7-201ENST00000605538 430 ntBASIC1.36□□□□□ -2.19
CSDE1O75534 U6.115-201ENST00000636045 103 ntBASIC1.36□□□□□ -2.19
CSDE1O75534 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CSDE1O75534 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
CSDE1O75534 MIR410-201ENST00000362222 80 ntBASIC1.35□□□□□ -2.19
CSDE1O75534 MIR96-201ENST00000362288 78 ntBASIC1.35□□□□□ -2.19
CSDE1O75534 SNORA27.1-201ENST00000362604 124 ntBASIC1.35□□□□□ -2.19
CSDE1O75534 RNU1-22P-201ENST00000363334 158 ntBASIC1.35□□□□□ -2.19
CSDE1O75534 SNORD114-27-201ENST00000363766 70 ntBASIC1.35□□□□□ -2.19
CSDE1O75534 RNU6-961P-201ENST00000363893 105 ntBASIC1.35□□□□□ -2.19
CSDE1O75534 RNU6-454P-201ENST00000364292 107 ntBASIC1.35□□□□□ -2.19
CSDE1O75534 Y_RNA.463-201ENST00000384271 102 ntBASIC1.35□□□□□ -2.19
CSDE1O75534 RNU6-1065P-201ENST00000384513 106 ntBASIC1.35□□□□□ -2.19
CSDE1O75534 MTCO3P19-201ENST00000415864 321 ntBASIC1.35□□□□□ -2.19
CSDE1O75534 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.35□□□□□ -2.19
CSDE1O75534 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.35□□□□□ -2.19
CSDE1O75534 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.35□□□□□ -2.19
CSDE1O75534 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.35□□□□□ -2.19
CSDE1O75534 AC011476.5-201ENST00000615594 130 ntBASIC1.35□□□□□ -2.19
CSDE1O75534 MIR8054-201ENST00000620877 86 ntBASIC1.35□□□□□ -2.19
CSDE1O75534 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.35□□□□□ -2.19
CSDE1O75534 AC018630.2-201ENST00000534866 2403 ntBASIC1.35□□□□□ -2.19
CSDE1O75534 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CSDE1O75534 MIR302D-201ENST00000362275 68 ntBASIC1.34□□□□□ -2.19
CSDE1O75534 RNU6-440P-201ENST00000390882 105 ntBASIC1.34□□□□□ -2.19
CSDE1O75534 MIR873-201ENST00000401120 77 ntBASIC1.34□□□□□ -2.19
CSDE1O75534 MRPL35P1-201ENST00000404272 572 ntBASIC1.34□□□□□ -2.19
CSDE1O75534 MTATP6P23-201ENST00000440153 476 ntBASIC1.34□□□□□ -2.19
CSDE1O75534 RNU7-152P-201ENST00000458982 64 ntBASIC1.34□□□□□ -2.19
CSDE1O75534 AC099513.1-201ENST00000490423 301 ntBASIC1.34□□□□□ -2.19
CSDE1O75534 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.34□□□□□ -2.19
CSDE1O75534 RNU6-1278P-201ENST00000516130 107 ntBASIC1.34□□□□□ -2.19
CSDE1O75534 VN1R91P-201ENST00000594377 169 ntBASIC1.34□□□□□ -2.19
CSDE1O75534 AC006380.1-201ENST00000603598 186 ntBASIC1.34□□□□□ -2.19
CSDE1O75534 AC004467.1-201ENST00000615678 330 ntBASIC1.34□□□□□ -2.19
CSDE1O75534 MIR6079-201ENST00000635807 62 ntBASIC1.34□□□□□ -2.19
CSDE1O75534 AC091812.1-201ENST00000432235 1948 ntBASIC1.34□□□□□ -2.2
CSDE1O75534 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CSDE1O75534 RNU6-1115P-201ENST00000362490 106 ntBASIC1.33□□□□□ -2.2
CSDE1O75534 RNU6-1031P-201ENST00000384773 107 ntBASIC1.33□□□□□ -2.2
CSDE1O75534 MIR150-201ENST00000385048 84 ntBASIC1.33□□□□□ -2.2
CSDE1O75534 MIR513A1-201ENST00000385138 129 ntBASIC1.33□□□□□ -2.2
CSDE1O75534 AL135790.2-201ENST00000437701 267 ntBASIC1.33□□□□□ -2.2
CSDE1O75534 AC027119.1-201ENST00000440877 241 ntBASIC1.33□□□□□ -2.2
CSDE1O75534 COX6CP14-201ENST00000469580 174 ntBASIC1.33□□□□□ -2.2
CSDE1O75534 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.33□□□□□ -2.2
CSDE1O75534 SNORA31.10-201ENST00000516482 106 ntBASIC1.33□□□□□ -2.2
CSDE1O75534 RNU6-911P-201ENST00000516523 104 ntBASIC1.33□□□□□ -2.2
CSDE1O75534 AC008269.2-201ENST00000561915 1105 ntBASIC1.33□□□□□ -2.2
CSDE1O75534 MIR4659A-201ENST00000580269 81 ntBASIC1.33□□□□□ -2.2
CSDE1O75534 AC005176.2-201ENST00000596933 147 ntBASIC1.33□□□□□ -2.2
CSDE1O75534 AL021879.1-201ENST00000611756 288 ntBASIC1.33□□□□□ -2.2
CSDE1O75534 AC021506.2-201ENST00000612354 169 ntBASIC1.33□□□□□ -2.2
CSDE1O75534 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CSDE1O75534 Y_RNA.39-201ENST00000362620 98 ntBASIC1.32□□□□□ -2.2
CSDE1O75534 Y_RNA.124-201ENST00000363339 93 ntBASIC1.32□□□□□ -2.2
CSDE1O75534 Y_RNA.267-201ENST00000364679 109 ntBASIC1.32□□□□□ -2.2
CSDE1O75534 RNA5SP259-201ENST00000365541 109 ntBASIC1.32□□□□□ -2.2
CSDE1O75534 RNU6-708P-201ENST00000384217 107 ntBASIC1.32□□□□□ -2.2
CSDE1O75534 AL034345.1-201ENST00000407768 123 ntBASIC1.32□□□□□ -2.2
CSDE1O75534 AC022028.1-201ENST00000412054 408 ntBASIC1.32□□□□□ -2.2
CSDE1O75534 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.32□□□□□ -2.2
CSDE1O75534 AL161935.2-201ENST00000414627 60 ntBASIC1.32□□□□□ -2.2
CSDE1O75534 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.32□□□□□ -2.2
CSDE1O75534 RPL30P13-201ENST00000418873 348 ntBASIC1.32□□□□□ -2.2
CSDE1O75534 SDAD1P3-201ENST00000427380 333 ntBASIC1.32□□□□□ -2.2
CSDE1O75534 STAG3L5P-204ENST00000443759 179 ntBASIC1.32□□□□□ -2.2
CSDE1O75534 SUMO1P2-201ENST00000452524 304 ntBASIC1.32□□□□□ -2.2
CSDE1O75534 AC091021.1-201ENST00000468051 388 ntBASIC1.32□□□□□ -2.2
CSDE1O75534 RNU2-56P-201ENST00000516826 190 ntBASIC1.32□□□□□ -2.2
CSDE1O75534 AC090821.2-201ENST00000523552 176 ntBASIC1.32□□□□□ -2.2
CSDE1O75534 AC092447.9-201ENST00000603395 144 ntBASIC1.32□□□□□ -2.2
CSDE1O75534 AC040896.1-201ENST00000613819 479 ntBASIC1.32□□□□□ -2.2
CSDE1O75534 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.32□□□□□ -2.2
CSDE1O75534 AC138305.3-201ENST00000624988 240 ntBASIC1.32□□□□□ -2.2
CSDE1O75534 MIR4272-201ENST00000635924 64 ntBASIC1.32□□□□□ -2.2
CSDE1O75534 U6.92-201ENST00000636464 89 ntBASIC1.32□□□□□ -2.2
CSDE1O75534 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CSDE1O75534 Y_RNA.27-201ENST00000362540 103 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 158.1 ms