Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 PRSS3P4-201ENST00000453323 162 ntBASIC4.06□□□□□ -1.76
RNF40O75150 AC026403.1-201ENST00000518938 295 ntBASIC4.06□□□□□ -1.76
RNF40O75150 MIR4765-201ENST00000585007 77 ntBASIC4.06□□□□□ -1.76
RNF40O75150 HSPE1P19-201ENST00000603327 295 ntBASIC4.06□□□□□ -1.76
RNF40O75150 AC091167.4-201ENST00000605079 184 ntBASIC4.06□□□□□ -1.76
RNF40O75150 U6.108-201ENST00000637764 58 ntBASIC4.06□□□□□ -1.76
RNF40O75150 AC009093.8-201ENST00000641769 292 ntBASIC4.06□□□□□ -1.76
RNF40O75150 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RNF40O75150 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.06□□□□□ -1.76
RNF40O75150 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNF40O75150 U8.11-201ENST00000384699 133 ntBASIC4.05□□□□□ -1.76
RNF40O75150 MIR1253-201ENST00000408273 105 ntBASIC4.05□□□□□ -1.76
RNF40O75150 RNU6-1186P-201ENST00000410429 97 ntBASIC4.05□□□□□ -1.76
RNF40O75150 Y_RNA.620-201ENST00000411009 88 ntBASIC4.05□□□□□ -1.76
RNF40O75150 AL445646.1-201ENST00000431784 216 ntBASIC4.05□□□□□ -1.76
RNF40O75150 U8.18-201ENST00000459285 133 ntBASIC4.05□□□□□ -1.76
RNF40O75150 TRBV12-2-201ENST00000489763 344 ntBASIC4.05□□□□□ -1.76
RNF40O75150 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF40O75150 RNU6-586P-201ENST00000517265 104 ntBASIC4.05□□□□□ -1.76
RNF40O75150 AC087499.8-201ENST00000578406 226 ntBASIC4.05□□□□□ -1.76
RNF40O75150 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.05□□□□□ -1.76
RNF40O75150 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNF40O75150 CEP170P1-201ENST00000502249 4587 ntBASIC4.04□□□□□ -1.76
RNF40O75150 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF40O75150 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF40O75150 RNU6-268P-201ENST00000364174 107 ntBASIC4.04□□□□□ -1.76
RNF40O75150 RNU6-776P-201ENST00000364403 104 ntBASIC4.04□□□□□ -1.76
RNF40O75150 RNU4-67P-201ENST00000364569 141 ntBASIC4.04□□□□□ -1.76
RNF40O75150 RNA5SP97-201ENST00000365006 84 ntBASIC4.04□□□□□ -1.76
RNF40O75150 RNU6-1022P-201ENST00000365049 104 ntBASIC4.04□□□□□ -1.76
RNF40O75150 Y_RNA.332-201ENST00000365271 113 ntBASIC4.04□□□□□ -1.76
RNF40O75150 SNORA5A-201ENST00000384111 134 ntBASIC4.04□□□□□ -1.76
RNF40O75150 MIR605-201ENST00000385078 83 ntBASIC4.04□□□□□ -1.76
RNF40O75150 RPS15AP28-201ENST00000435088 386 ntBASIC4.04□□□□□ -1.76
RNF40O75150 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF40O75150 RNU2-11P-201ENST00000459191 187 ntBASIC4.04□□□□□ -1.76
RNF40O75150 RNU1-95P-201ENST00000516357 160 ntBASIC4.04□□□□□ -1.76
RNF40O75150 RNU1-128P-201ENST00000516704 160 ntBASIC4.04□□□□□ -1.76
RNF40O75150 RNU6-965P-201ENST00000516721 96 ntBASIC4.04□□□□□ -1.76
RNF40O75150 Y_RNA.714-201ENST00000517065 90 ntBASIC4.04□□□□□ -1.76
RNF40O75150 MIR4738-201ENST00000579134 87 ntBASIC4.04□□□□□ -1.76
RNF40O75150 MIR4762-201ENST00000585261 75 ntBASIC4.04□□□□□ -1.76
RNF40O75150 AL161756.2-201ENST00000604597 246 ntBASIC4.04□□□□□ -1.76
RNF40O75150 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
RNF40O75150 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF40O75150 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RNF40O75150 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RNF40O75150 MAPK10-372ENST00000641954 3413 ntBASIC4.03□□□□□ -1.76
RNF40O75150 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RNF40O75150 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC4.03□□□□□ -1.76
RNF40O75150 snoU2-30.2-201ENST00000362805 70 ntBASIC4.03□□□□□ -1.76
RNF40O75150 RNU4-16P-201ENST00000364737 141 ntBASIC4.03□□□□□ -1.76
RNF40O75150 Y_RNA.377-201ENST00000365644 108 ntBASIC4.03□□□□□ -1.76
RNF40O75150 RNU6-788P-201ENST00000390967 104 ntBASIC4.03□□□□□ -1.76
RNF40O75150 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC4.03□□□□□ -1.76
RNF40O75150 AC093259.1-201ENST00000509755 300 ntBASIC4.03□□□□□ -1.76
RNF40O75150 SNORA31.4-201ENST00000516049 129 ntBASIC4.03□□□□□ -1.76
RNF40O75150 RNU2-58P-201ENST00000516403 183 ntBASIC4.03□□□□□ -1.76
RNF40O75150 AC019176.2-201ENST00000611579 315 ntBASIC4.03□□□□□ -1.76
RNF40O75150 MIR203B-201ENST00000636080 86 ntBASIC4.03□□□□□ -1.76
RNF40O75150 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.03□□□□□ -1.76
RNF40O75150 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF40O75150 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
RNF40O75150 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF40O75150 Y_RNA.155-201ENST00000363632 101 ntBASIC4.02□□□□□ -1.77
RNF40O75150 RNA5SP399-201ENST00000364003 117 ntBASIC4.02□□□□□ -1.77
RNF40O75150 U8.5-201ENST00000364528 136 ntBASIC4.02□□□□□ -1.77
RNF40O75150 RNU6-442P-201ENST00000383968 104 ntBASIC4.02□□□□□ -1.77
RNF40O75150 RNU6-409P-201ENST00000384114 104 ntBASIC4.02□□□□□ -1.77
RNF40O75150 RNU11-5P-201ENST00000391216 129 ntBASIC4.02□□□□□ -1.77
RNF40O75150 SNORA3.3-201ENST00000408712 125 ntBASIC4.02□□□□□ -1.77
RNF40O75150 RNA5SP144-201ENST00000410846 116 ntBASIC4.02□□□□□ -1.77
RNF40O75150 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4.02□□□□□ -1.77
RNF40O75150 YPEL5P3-201ENST00000547227 352 ntBASIC4.02□□□□□ -1.77
RNF40O75150 AC078899.2-201ENST00000595282 212 ntBASIC4.02□□□□□ -1.77
RNF40O75150 YPEL5P2-201ENST00000605553 359 ntBASIC4.02□□□□□ -1.77
RNF40O75150 AC006160.2-201ENST00000637708 154 ntBASIC4.02□□□□□ -1.77
RNF40O75150 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.02□□□□□ -1.77
RNF40O75150 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RNF40O75150 SNORA1B-201ENST00000362535 133 ntBASIC4.01□□□□□ -1.77
RNF40O75150 Y_RNA.96-201ENST00000363092 109 ntBASIC4.01□□□□□ -1.77
RNF40O75150 Y_RNA.351-201ENST00000365436 96 ntBASIC4.01□□□□□ -1.77
RNF40O75150 RNU6-679P-201ENST00000391003 106 ntBASIC4.01□□□□□ -1.77
RNF40O75150 AC123900.1-201ENST00000420390 96 ntBASIC4.01□□□□□ -1.77
RNF40O75150 AC244505.4-201ENST00000434905 287 ntBASIC4.01□□□□□ -1.77
RNF40O75150 SSXP5-201ENST00000443473 287 ntBASIC4.01□□□□□ -1.77
RNF40O75150 RNU7-170P-201ENST00000459303 61 ntBASIC4.01□□□□□ -1.77
RNF40O75150 RNU7-80P-201ENST00000459562 61 ntBASIC4.01□□□□□ -1.77
RNF40O75150 AP003484.1-201ENST00000530974 250 ntBASIC4.01□□□□□ -1.77
RNF40O75150 MIR4425-201ENST00000580572 84 ntBASIC4.01□□□□□ -1.77
RNF40O75150 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC4.01□□□□□ -1.77
RNF40O75150 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.01□□□□□ -1.77
RNF40O75150 AC064859.1-201ENST00000624741 174 ntBASIC4.01□□□□□ -1.77
RNF40O75150 MIR4662A-201ENST00000637499 67 ntBASIC4.01□□□□□ -1.77
RNF40O75150 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF40O75150 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RNF40O75150 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF40O75150 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
RNF40O75150 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF40O75150 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms