Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AL513534.2-201ENST00000603836 250 ntBASIC0.65□□□□□ -2.31
BRD4O60885 SNORA28-201ENST00000606769 126 ntBASIC0.65□□□□□ -2.31
BRD4O60885 AC093913.1-201ENST00000614178 329 ntBASIC0.65□□□□□ -2.31
BRD4O60885 AC073349.3-201ENST00000617616 186 ntBASIC0.65□□□□□ -2.31
BRD4O60885 AL513423.1-201ENST00000621695 132 ntBASIC0.65□□□□□ -2.31
BRD4O60885 ZNF299P-201ENST00000406845 1804 ntBASIC0.65□□□□□ -2.31
BRD4O60885 Y_RNA.41-201ENST00000362646 102 ntBASIC0.64□□□□□ -2.31
BRD4O60885 RNU6-595P-201ENST00000363944 107 ntBASIC0.64□□□□□ -2.31
BRD4O60885 RNU6-281P-201ENST00000384212 103 ntBASIC0.64□□□□□ -2.31
BRD4O60885 Y_RNA.533-201ENST00000384596 114 ntBASIC0.64□□□□□ -2.31
BRD4O60885 MIR10B-201ENST00000385011 110 ntBASIC0.64□□□□□ -2.31
BRD4O60885 SNORD12-201ENST00000391002 90 ntBASIC0.64□□□□□ -2.31
BRD4O60885 RNU2-70P-201ENST00000410718 179 ntBASIC0.64□□□□□ -2.31
BRD4O60885 AC243428.1-201ENST00000421099 264 ntBASIC0.64□□□□□ -2.31
BRD4O60885 MTCO2P7-201ENST00000446518 666 ntBASIC0.64□□□□□ -2.31
BRD4O60885 AL157398.1-201ENST00000452981 186 ntBASIC0.64□□□□□ -2.31
BRD4O60885 AP000870.1-201ENST00000472927 406 ntBASIC0.64□□□□□ -2.31
BRD4O60885 RNU6-864P-201ENST00000516256 108 ntBASIC0.64□□□□□ -2.31
BRD4O60885 Y_RNA.683-201ENST00000516508 93 ntBASIC0.64□□□□□ -2.31
BRD4O60885 RNU6-165P-201ENST00000517170 99 ntBASIC0.64□□□□□ -2.31
BRD4O60885 AL121579.1-201ENST00000555129 305 ntBASIC0.64□□□□□ -2.31
BRD4O60885 MIR3942-201ENST00000585264 109 ntBASIC0.64□□□□□ -2.31
BRD4O60885 AL390123.1-201ENST00000603216 237 ntBASIC0.64□□□□□ -2.31
BRD4O60885 AC006435.5-201ENST00000624486 112 ntBASIC0.64□□□□□ -2.31
BRD4O60885 AC100810.6-201ENST00000638068 285 ntBASIC0.64□□□□□ -2.31
BRD4O60885 RNU4-76P-201ENST00000364509 141 ntBASIC0.63□□□□□ -2.31
BRD4O60885 RNU4-24P-201ENST00000364565 139 ntBASIC0.63□□□□□ -2.31
BRD4O60885 Y_RNA.265-201ENST00000364677 108 ntBASIC0.63□□□□□ -2.31
BRD4O60885 Y_RNA.303-201ENST00000364998 94 ntBASIC0.63□□□□□ -2.31
BRD4O60885 MTCYBP4-201ENST00000401524 249 ntBASIC0.63□□□□□ -2.31
BRD4O60885 AC114737.2-201ENST00000421583 173 ntBASIC0.63□□□□□ -2.31
BRD4O60885 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.63□□□□□ -2.31
BRD4O60885 RNU6-566P-201ENST00000516790 107 ntBASIC0.63□□□□□ -2.31
BRD4O60885 AC023157.2-201ENST00000540596 141 ntBASIC0.63□□□□□ -2.31
BRD4O60885 AC090617.3-201ENST00000573670 475 ntBASIC0.63□□□□□ -2.31
BRD4O60885 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.63□□□□□ -2.31
BRD4O60885 AC012557.2-201ENST00000605919 418 ntBASIC0.63□□□□□ -2.31
BRD4O60885 AC100812.1-201ENST00000607622 580 ntBASIC0.63□□□□□ -2.31
BRD4O60885 MIR6128-201ENST00000615528 109 ntBASIC0.63□□□□□ -2.31
BRD4O60885 AC106754.2-201ENST00000623006 233 ntBASIC0.63□□□□□ -2.31
BRD4O60885 AC090617.10-201ENST00000624308 134 ntBASIC0.63□□□□□ -2.31
BRD4O60885 RNU4-75P-201ENST00000364621 146 ntBASIC0.62□□□□□ -2.31
BRD4O60885 Y_RNA.436-201ENST00000384097 102 ntBASIC0.62□□□□□ -2.31
BRD4O60885 SNORA50A-201ENST00000384225 134 ntBASIC0.62□□□□□ -2.31
BRD4O60885 MIR562-201ENST00000384894 95 ntBASIC0.62□□□□□ -2.31
BRD4O60885 MIR660-201ENST00000385235 97 ntBASIC0.62□□□□□ -2.31
BRD4O60885 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
BRD4O60885 MIR1265-201ENST00000408444 86 ntBASIC0.62□□□□□ -2.31
BRD4O60885 RNA5SP118-201ENST00000410385 109 ntBASIC0.62□□□□□ -2.31
BRD4O60885 AL139396.1-201ENST00000421137 167 ntBASIC0.62□□□□□ -2.31
BRD4O60885 AC063976.4-201ENST00000421971 163 ntBASIC0.62□□□□□ -2.31
BRD4O60885 USP9YP16-201ENST00000430287 407 ntBASIC0.62□□□□□ -2.31
BRD4O60885 USP9YP23-201ENST00000455085 407 ntBASIC0.62□□□□□ -2.31
BRD4O60885 SNORD124-201ENST00000459577 104 ntBASIC0.62□□□□□ -2.31
BRD4O60885 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.62□□□□□ -2.31
BRD4O60885 RNU6-1114P-201ENST00000516022 107 ntBASIC0.62□□□□□ -2.31
BRD4O60885 RNU6-1314P-201ENST00000517139 104 ntBASIC0.62□□□□□ -2.31
BRD4O60885 RNU7-128P-201ENST00000517247 62 ntBASIC0.62□□□□□ -2.31
BRD4O60885 AC091144.1-201ENST00000519573 138 ntBASIC0.62□□□□□ -2.31
BRD4O60885 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.62□□□□□ -2.31
BRD4O60885 MIR3684-201ENST00000579779 74 ntBASIC0.62□□□□□ -2.31
BRD4O60885 MIR4514-201ENST00000581410 57 ntBASIC0.62□□□□□ -2.31
BRD4O60885 GHRLOS.1-201ENST00000610995 70 ntBASIC0.62□□□□□ -2.31
BRD4O60885 AC067863.3-201ENST00000624172 122 ntBASIC0.62□□□□□ -2.31
BRD4O60885 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
BRD4O60885 Y_RNA.48-201ENST00000362710 103 ntBASIC0.61□□□□□ -2.31
BRD4O60885 RNU6-199P-201ENST00000362954 107 ntBASIC0.61□□□□□ -2.31
BRD4O60885 Y_RNA.89-201ENST00000363031 102 ntBASIC0.61□□□□□ -2.31
BRD4O60885 Y_RNA.157-201ENST00000363638 102 ntBASIC0.61□□□□□ -2.31
BRD4O60885 Y_RNA.453-201ENST00000384223 109 ntBASIC0.61□□□□□ -2.31
BRD4O60885 RNU6-831P-201ENST00000384548 107 ntBASIC0.61□□□□□ -2.31
BRD4O60885 Y_RNA.554-201ENST00000384672 102 ntBASIC0.61□□□□□ -2.31
BRD4O60885 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.61□□□□□ -2.31
BRD4O60885 MTCO3P19-201ENST00000415864 321 ntBASIC0.61□□□□□ -2.31
BRD4O60885 USP9YP30-201ENST00000430729 455 ntBASIC0.61□□□□□ -2.31
BRD4O60885 MTND3P23-201ENST00000431980 347 ntBASIC0.61□□□□□ -2.31
BRD4O60885 STAG3L5P-204ENST00000443759 179 ntBASIC0.61□□□□□ -2.31
BRD4O60885 MRPS10P1-201ENST00000448483 130 ntBASIC0.61□□□□□ -2.31
BRD4O60885 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.61□□□□□ -2.31
BRD4O60885 AC046134.1-201ENST00000514454 666 ntBASIC0.61□□□□□ -2.31
BRD4O60885 RNU6-947P-201ENST00000516264 106 ntBASIC0.61□□□□□ -2.31
BRD4O60885 RNA5SP168-201ENST00000516642 112 ntBASIC0.61□□□□□ -2.31
BRD4O60885 RNU7-28P-201ENST00000516759 62 ntBASIC0.61□□□□□ -2.31
BRD4O60885 RNU6-1088P-201ENST00000516850 104 ntBASIC0.61□□□□□ -2.31
BRD4O60885 RNU7-172P-201ENST00000517125 64 ntBASIC0.61□□□□□ -2.31
BRD4O60885 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.61□□□□□ -2.31
BRD4O60885 AC093023.1-201ENST00000547375 507 ntBASIC0.61□□□□□ -2.31
BRD4O60885 MIR3662-201ENST00000637030 95 ntBASIC0.61□□□□□ -2.31
BRD4O60885 MIR6759-201ENST00000638110 65 ntBASIC0.61□□□□□ -2.31
BRD4O60885 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.61□□□□□ -2.31
BRD4O60885 MTND5P16-201ENST00000460269 1703 ntBASIC0.6□□□□□ -2.31
BRD4O60885 RNU4-79P-201ENST00000362764 141 ntBASIC0.6□□□□□ -2.31
BRD4O60885 RNU6-623P-201ENST00000363143 105 ntBASIC0.6□□□□□ -2.31
BRD4O60885 Y_RNA.106-201ENST00000363189 100 ntBASIC0.6□□□□□ -2.31
BRD4O60885 RNU4-12P-201ENST00000365233 139 ntBASIC0.6□□□□□ -2.31
BRD4O60885 Y_RNA.498-201ENST00000384460 102 ntBASIC0.6□□□□□ -2.31
BRD4O60885 RNU6-910P-201ENST00000390844 107 ntBASIC0.6□□□□□ -2.31
BRD4O60885 RNU6-700P-201ENST00000391043 107 ntBASIC0.6□□□□□ -2.31
BRD4O60885 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.6□□□□□ -2.31
BRD4O60885 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms