Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AL096861.1-201ENST00000610899 123 ntBASIC0.72□□□□□ -2.29
CHMP2AO43633 AC073544.1-201ENST00000600110 1595 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 SNORA27.1-201ENST00000362604 124 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 RNU4-41P-201ENST00000364426 143 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 RNU6-318P-201ENST00000384283 103 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 SNORD12-201ENST00000391002 90 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 SNORA75.2-201ENST00000391138 150 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 SNORA75.3-201ENST00000391231 150 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
CHMP2AO43633 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.71□□□□□ -2.3
CHMP2AO43633 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.71□□□□□ -2.3
CHMP2AO43633 RPEP5-201ENST00000441137 268 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 UQCRBP2-201ENST00000447827 297 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 AC233266.1-201ENST00000454518 96 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 SNORD5.1-201ENST00000458800 75 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 snoU13.18-201ENST00000459483 104 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 RPL7P42-201ENST00000481005 679 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.71□□□□□ -2.3
CHMP2AO43633 RNU6-718P-201ENST00000516166 105 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 RNU2-56P-201ENST00000516826 190 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 RNU1-54P-201ENST00000517181 120 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.71□□□□□ -2.3
CHMP2AO43633 AC055872.1-201ENST00000570978 278 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 MIR5701-3-201ENST00000578890 82 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 MIR3192-201ENST00000584920 77 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 MIR5701-1-201ENST00000585138 82 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.71□□□□□ -2.3
CHMP2AO43633 AC242852.1-201ENST00000612151 96 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 MIR5701-2-201ENST00000615634 82 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 AC244015.1-201ENST00000622301 99 ntBASIC0.71□□□□□ -2.3
CHMP2AO43633 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
CHMP2AO43633 RNY1P16-201ENST00000363063 111 ntBASIC0.7□□□□□ -2.3
CHMP2AO43633 RNU6-879P-201ENST00000364328 108 ntBASIC0.7□□□□□ -2.3
CHMP2AO43633 RNU6-596P-201ENST00000365395 98 ntBASIC0.7□□□□□ -2.3
CHMP2AO43633 Y_RNA.354-201ENST00000365448 111 ntBASIC0.7□□□□□ -2.3
CHMP2AO43633 Y_RNA.358-201ENST00000365491 99 ntBASIC0.7□□□□□ -2.3
CHMP2AO43633 RNU6-376P-201ENST00000384731 106 ntBASIC0.7□□□□□ -2.3
CHMP2AO43633 MIR190B-201ENST00000401119 79 ntBASIC0.7□□□□□ -2.3
CHMP2AO43633 MIR548F5-201ENST00000408421 86 ntBASIC0.7□□□□□ -2.3
CHMP2AO43633 Y_RNA.594-201ENST00000410373 140 ntBASIC0.7□□□□□ -2.3
CHMP2AO43633 PIGPP3-201ENST00000425307 415 ntBASIC0.7□□□□□ -2.3
CHMP2AO43633 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.7□□□□□ -2.3
CHMP2AO43633 RNU6-1132P-201ENST00000459214 107 ntBASIC0.7□□□□□ -2.3
CHMP2AO43633 RNU6-1213P-201ENST00000517075 94 ntBASIC0.7□□□□□ -2.3
CHMP2AO43633 AC022868.1-201ENST00000517767 391 ntBASIC0.7□□□□□ -2.3
CHMP2AO43633 AC090049.2-201ENST00000550377 109 ntBASIC0.7□□□□□ -2.3
CHMP2AO43633 AC100812.1-201ENST00000607622 580 ntBASIC0.7□□□□□ -2.3
CHMP2AO43633 AL008636.1-201ENST00000625038 1018 ntBASIC0.7□□□□□ -2.3
CHMP2AO43633 U6.115-201ENST00000636045 103 ntBASIC0.7□□□□□ -2.3
CHMP2AO43633 Y_RNA.2-201ENST00000362330 96 ntBASIC0.69□□□□□ -2.3
CHMP2AO43633 Y_RNA.796-201ENST00000364268 102 ntBASIC0.69□□□□□ -2.3
CHMP2AO43633 Y_RNA.799-201ENST00000364992 102 ntBASIC0.69□□□□□ -2.3
CHMP2AO43633 RNU6-1335P-201ENST00000365426 107 ntBASIC0.69□□□□□ -2.3
CHMP2AO43633 Y_RNA.404-201ENST00000383978 102 ntBASIC0.69□□□□□ -2.3
CHMP2AO43633 RNU6-1145P-201ENST00000384246 107 ntBASIC0.69□□□□□ -2.3
CHMP2AO43633 MIR200A-201ENST00000384875 90 ntBASIC0.69□□□□□ -2.3
CHMP2AO43633 MTCO3P19-201ENST00000415864 321 ntBASIC0.69□□□□□ -2.3
CHMP2AO43633 MTND4LP16-201ENST00000440828 295 ntBASIC0.69□□□□□ -2.3
CHMP2AO43633 AL137792.2-201ENST00000443484 235 ntBASIC0.69□□□□□ -2.3
CHMP2AO43633 RPL30P15-201ENST00000457129 321 ntBASIC0.69□□□□□ -2.3
CHMP2AO43633 AC069439.1-201ENST00000494739 167 ntBASIC0.69□□□□□ -2.3
CHMP2AO43633 AC022493.2-201ENST00000506122 481 ntBASIC0.69□□□□□ -2.3
CHMP2AO43633 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.69□□□□□ -2.3
CHMP2AO43633 AC018448.1-201ENST00000552843 316 ntBASIC0.69□□□□□ -2.3
CHMP2AO43633 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.69□□□□□ -2.3
CHMP2AO43633 7SK.7-201ENST00000603504 247 ntBASIC0.69□□□□□ -2.3
CHMP2AO43633 AC018462.2-201ENST00000605375 395 ntBASIC0.69□□□□□ -2.3
CHMP2AO43633 MIR1244-1-201ENST00000612829 85 ntBASIC0.69□□□□□ -2.3
CHMP2AO43633 MIR6515-201ENST00000619843 57 ntBASIC0.69□□□□□ -2.3
CHMP2AO43633 MIR1244-3-201ENST00000635744 85 ntBASIC0.69□□□□□ -2.3
CHMP2AO43633 MIR1244-2-201ENST00000636449 85 ntBASIC0.69□□□□□ -2.3
CHMP2AO43633 MIR1244-4-202ENST00000636813 85 ntBASIC0.69□□□□□ -2.3
CHMP2AO43633 MIR3688-2-201ENST00000636963 87 ntBASIC0.69□□□□□ -2.3
CHMP2AO43633 Y_RNA.9-201ENST00000362354 101 ntBASIC0.68□□□□□ -2.3
CHMP2AO43633 Y_RNA.86-201ENST00000363020 111 ntBASIC0.68□□□□□ -2.3
CHMP2AO43633 RNU1-133P-201ENST00000364867 167 ntBASIC0.68□□□□□ -2.3
CHMP2AO43633 RNU6-117P-201ENST00000365415 107 ntBASIC0.68□□□□□ -2.3
CHMP2AO43633 MIR181A1-201ENST00000385026 110 ntBASIC0.68□□□□□ -2.3
CHMP2AO43633 AL451046.2-201ENST00000403074 277 ntBASIC0.68□□□□□ -2.3
CHMP2AO43633 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
CHMP2AO43633 RNU6-373P-201ENST00000411247 98 ntBASIC0.68□□□□□ -2.3
CHMP2AO43633 USMG5P1-201ENST00000425964 177 ntBASIC0.68□□□□□ -2.3
CHMP2AO43633 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.68□□□□□ -2.3
CHMP2AO43633 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.68□□□□□ -2.3
CHMP2AO43633 RNU7-94P-201ENST00000459576 63 ntBASIC0.68□□□□□ -2.3
CHMP2AO43633 RNU6-341P-201ENST00000516973 96 ntBASIC0.68□□□□□ -2.3
CHMP2AO43633 AC023442.1-201ENST00000531247 422 ntBASIC0.68□□□□□ -2.3
CHMP2AO43633 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CHMP2AO43633 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CHMP2AO43633 Y_RNA.172-201ENST00000363765 102 ntBASIC0.67□□□□□ -2.3
CHMP2AO43633 RNU6-1264P-201ENST00000383891 107 ntBASIC0.67□□□□□ -2.3
CHMP2AO43633 SNORA80D-201ENST00000384488 135 ntBASIC0.67□□□□□ -2.3
CHMP2AO43633 MIR489-201ENST00000384923 84 ntBASIC0.67□□□□□ -2.3
CHMP2AO43633 RNU6-1050P-201ENST00000410388 107 ntBASIC0.67□□□□□ -2.3
CHMP2AO43633 RNA5SP511-201ENST00000410487 115 ntBASIC0.67□□□□□ -2.3
CHMP2AO43633 RNU5A-5P-201ENST00000411054 116 ntBASIC0.67□□□□□ -2.3
CHMP2AO43633 RPS3AP52-201ENST00000435639 297 ntBASIC0.67□□□□□ -2.3
CHMP2AO43633 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.67□□□□□ -2.3
CHMP2AO43633 MTND3P10-201ENST00000450967 341 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms