Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.12□□□□□ -2.23
RIPK2O43353 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.12□□□□□ -2.23
RIPK2O43353 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.12□□□□□ -2.23
RIPK2O43353 AC099799.1-201ENST00000439809 192 ntBASIC1.12□□□□□ -2.23
RIPK2O43353 RPL39P38-201ENST00000467018 153 ntBASIC1.12□□□□□ -2.23
RIPK2O43353 AC108729.3-201ENST00000513484 108 ntBASIC1.12□□□□□ -2.23
RIPK2O43353 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.12□□□□□ -2.23
RIPK2O43353 AC027419.1-201ENST00000522976 328 ntBASIC1.12□□□□□ -2.23
RIPK2O43353 AL022345.2-201ENST00000606307 135 ntBASIC1.12□□□□□ -2.23
RIPK2O43353 AL512598.1-201ENST00000610158 273 ntBASIC1.12□□□□□ -2.23
RIPK2O43353 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.12□□□□□ -2.23
RIPK2O43353 U6.73-201ENST00000619194 103 ntBASIC1.12□□□□□ -2.23
RIPK2O43353 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
RIPK2O43353 Y_RNA.5-201ENST00000362334 102 ntBASIC1.11□□□□□ -2.23
RIPK2O43353 RNU6-961P-201ENST00000363893 105 ntBASIC1.11□□□□□ -2.23
RIPK2O43353 Y_RNA.338-201ENST00000365320 114 ntBASIC1.11□□□□□ -2.23
RIPK2O43353 RNU6-926P-201ENST00000384075 107 ntBASIC1.11□□□□□ -2.23
RIPK2O43353 SNORA20B-201ENST00000384220 132 ntBASIC1.11□□□□□ -2.23
RIPK2O43353 RNY3P4-201ENST00000384428 101 ntBASIC1.11□□□□□ -2.23
RIPK2O43353 MT-TD-201ENST00000387419 68 ntBASIC1.11□□□□□ -2.23
RIPK2O43353 RPL21P1-201ENST00000399532 476 ntBASIC1.11□□□□□ -2.23
RIPK2O43353 AC108667.1-201ENST00000428618 249 ntBASIC1.11□□□□□ -2.23
RIPK2O43353 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.11□□□□□ -2.23
RIPK2O43353 AC236972.2-201ENST00000434979 310 ntBASIC1.11□□□□□ -2.23
RIPK2O43353 MRPS10P1-201ENST00000448483 130 ntBASIC1.11□□□□□ -2.23
RIPK2O43353 UBL5P1-201ENST00000507979 193 ntBASIC1.11□□□□□ -2.23
RIPK2O43353 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.11□□□□□ -2.23
RIPK2O43353 AC144568.1-201ENST00000520139 137 ntBASIC1.11□□□□□ -2.23
RIPK2O43353 AC023157.2-201ENST00000540596 141 ntBASIC1.11□□□□□ -2.23
RIPK2O43353 AL137100.2-201ENST00000555786 315 ntBASIC1.11□□□□□ -2.23
RIPK2O43353 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.11□□□□□ -2.23
RIPK2O43353 AC055872.1-201ENST00000570978 278 ntBASIC1.11□□□□□ -2.23
RIPK2O43353 AC022217.4-201ENST00000604389 163 ntBASIC1.11□□□□□ -2.23
RIPK2O43353 AL359075.3-201ENST00000613288 217 ntBASIC1.11□□□□□ -2.23
RIPK2O43353 U2.1-201ENST00000618978 145 ntBASIC1.11□□□□□ -2.23
RIPK2O43353 MIR4272-201ENST00000635924 64 ntBASIC1.11□□□□□ -2.23
RIPK2O43353 MIR3674-201ENST00000636576 68 ntBASIC1.11□□□□□ -2.23
RIPK2O43353 Y_RNA.146-201ENST00000363549 102 ntBASIC1.1□□□□□ -2.23
RIPK2O43353 Y_RNA.498-201ENST00000384460 102 ntBASIC1.1□□□□□ -2.23
RIPK2O43353 Y_RNA.509-201ENST00000384506 99 ntBASIC1.1□□□□□ -2.23
RIPK2O43353 Y_RNA.579-201ENST00000390939 94 ntBASIC1.1□□□□□ -2.23
RIPK2O43353 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.1□□□□□ -2.23
RIPK2O43353 RNU6-1186P-201ENST00000410429 97 ntBASIC1.1□□□□□ -2.23
RIPK2O43353 Y_RNA.605-201ENST00000410577 105 ntBASIC1.1□□□□□ -2.23
RIPK2O43353 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.1□□□□□ -2.23
RIPK2O43353 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.1□□□□□ -2.23
RIPK2O43353 DYNLT3P2-201ENST00000442517 295 ntBASIC1.1□□□□□ -2.23
RIPK2O43353 AL163540.1-201ENST00000485382 386 ntBASIC1.1□□□□□ -2.23
RIPK2O43353 AC010469.2-201ENST00000496412 480 ntBASIC1.1□□□□□ -2.23
RIPK2O43353 AC010598.1-201ENST00000510378 103 ntBASIC1.1□□□□□ -2.23
RIPK2O43353 RNU6-408P-201ENST00000515910 100 ntBASIC1.1□□□□□ -2.23
RIPK2O43353 RNU6-911P-201ENST00000516523 104 ntBASIC1.1□□□□□ -2.23
RIPK2O43353 RNU6-1012P-201ENST00000516606 109 ntBASIC1.1□□□□□ -2.23
RIPK2O43353 RNU1-142P-201ENST00000516682 145 ntBASIC1.1□□□□□ -2.23
RIPK2O43353 MIR4438-201ENST00000585271 93 ntBASIC1.1□□□□□ -2.23
RIPK2O43353 AC005828.6-201ENST00000606610 232 ntBASIC1.1□□□□□ -2.23
RIPK2O43353 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.1□□□□□ -2.23
RIPK2O43353 U6.115-201ENST00000636045 103 ntBASIC1.1□□□□□ -2.23
RIPK2O43353 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
RIPK2O43353 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.1□□□□□ -2.23
RIPK2O43353 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.09□□□□□ -2.23
RIPK2O43353 RNU6-457P-201ENST00000363999 107 ntBASIC1.09□□□□□ -2.23
RIPK2O43353 Y_RNA.252-201ENST00000364556 101 ntBASIC1.09□□□□□ -2.23
RIPK2O43353 Y_RNA.428-201ENST00000384078 102 ntBASIC1.09□□□□□ -2.23
RIPK2O43353 MRPL35P3-201ENST00000421557 364 ntBASIC1.09□□□□□ -2.23
RIPK2O43353 RPS27P22-201ENST00000478056 241 ntBASIC1.09□□□□□ -2.23
RIPK2O43353 AC093852.1-201ENST00000503587 266 ntBASIC1.09□□□□□ -2.23
RIPK2O43353 RNU7-99P-201ENST00000516271 62 ntBASIC1.09□□□□□ -2.23
RIPK2O43353 SNORA31.10-201ENST00000516482 106 ntBASIC1.09□□□□□ -2.23
RIPK2O43353 RNU4-77P-201ENST00000516692 156 ntBASIC1.09□□□□□ -2.23
RIPK2O43353 SNORD116.3-201ENST00000517176 78 ntBASIC1.09□□□□□ -2.23
RIPK2O43353 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.09□□□□□ -2.23
RIPK2O43353 AL929325.1-201ENST00000603096 117 ntBASIC1.09□□□□□ -2.23
RIPK2O43353 AL133255.1-201ENST00000606374 441 ntBASIC1.09□□□□□ -2.23
RIPK2O43353 AC103810.9-201ENST00000606688 112 ntBASIC1.09□□□□□ -2.23
RIPK2O43353 AC021506.2-201ENST00000612354 169 ntBASIC1.09□□□□□ -2.23
RIPK2O43353 AC006435.5-201ENST00000624486 112 ntBASIC1.09□□□□□ -2.23
RIPK2O43353 U6.92-201ENST00000636464 89 ntBASIC1.09□□□□□ -2.23
RIPK2O43353 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
RIPK2O43353 SNORA27.1-201ENST00000362604 124 ntBASIC1.08□□□□□ -2.24
RIPK2O43353 Y_RNA.124-201ENST00000363339 93 ntBASIC1.08□□□□□ -2.24
RIPK2O43353 RNU6-867P-201ENST00000364956 107 ntBASIC1.08□□□□□ -2.24
RIPK2O43353 RNU6-1031P-201ENST00000384773 107 ntBASIC1.08□□□□□ -2.24
RIPK2O43353 MIR628-201ENST00000385229 95 ntBASIC1.08□□□□□ -2.24
RIPK2O43353 SNORA12.1-201ENST00000390873 148 ntBASIC1.08□□□□□ -2.24
RIPK2O43353 SNORD78.2-201ENST00000391076 69 ntBASIC1.08□□□□□ -2.24
RIPK2O43353 RN7SKP200-201ENST00000410564 320 ntBASIC1.08□□□□□ -2.24
RIPK2O43353 RPL23AP36-201ENST00000413895 458 ntBASIC1.08□□□□□ -2.24
RIPK2O43353 AC018865.2-201ENST00000423631 129 ntBASIC1.08□□□□□ -2.24
RIPK2O43353 FCF1P4-201ENST00000448326 183 ntBASIC1.08□□□□□ -2.24
RIPK2O43353 AC009474.2-201ENST00000451383 136 ntBASIC1.08□□□□□ -2.24
RIPK2O43353 AC097462.1-201ENST00000514125 324 ntBASIC1.08□□□□□ -2.24
RIPK2O43353 RNU6-966P-201ENST00000516479 104 ntBASIC1.08□□□□□ -2.24
RIPK2O43353 RNU2-12P-201ENST00000517216 168 ntBASIC1.08□□□□□ -2.24
RIPK2O43353 SUMO2P16-201ENST00000519475 264 ntBASIC1.08□□□□□ -2.24
RIPK2O43353 AC023442.1-201ENST00000531247 422 ntBASIC1.08□□□□□ -2.24
RIPK2O43353 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.08□□□□□ -2.24
RIPK2O43353 AC006600.1-201ENST00000572529 153 ntBASIC1.08□□□□□ -2.24
RIPK2O43353 VN1R91P-201ENST00000594377 169 ntBASIC1.08□□□□□ -2.24
RIPK2O43353 AC092447.9-201ENST00000603395 144 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms