Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 AC006435.5-201ENST00000624486 112 ntBASIC1.42□□□□□ -2.18
LRRTM2O43300 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.42□□□□□ -2.18
LRRTM2O43300 AC010615.1-201ENST00000594254 1764 ntBASIC1.42□□□□□ -2.18
LRRTM2O43300 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
LRRTM2O43300 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LRRTM2O43300 Y_RNA.101-201ENST00000363154 102 ntBASIC1.41□□□□□ -2.18
LRRTM2O43300 Y_RNA.813-201ENST00000364639 102 ntBASIC1.41□□□□□ -2.18
LRRTM2O43300 RNU6-926P-201ENST00000384075 107 ntBASIC1.41□□□□□ -2.18
LRRTM2O43300 RNU6-42P-201ENST00000384165 107 ntBASIC1.41□□□□□ -2.18
LRRTM2O43300 Y_RNA.498-201ENST00000384460 102 ntBASIC1.41□□□□□ -2.18
LRRTM2O43300 MIR515-2-201ENST00000384883 83 ntBASIC1.41□□□□□ -2.18
LRRTM2O43300 MIR515-1-201ENST00000384884 83 ntBASIC1.41□□□□□ -2.18
LRRTM2O43300 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.41□□□□□ -2.18
LRRTM2O43300 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.41□□□□□ -2.18
LRRTM2O43300 SDAD1P3-201ENST00000427380 333 ntBASIC1.41□□□□□ -2.18
LRRTM2O43300 MTCYBP6-201ENST00000441810 138 ntBASIC1.41□□□□□ -2.18
LRRTM2O43300 RPS29P23-201ENST00000458635 123 ntBASIC1.41□□□□□ -2.18
LRRTM2O43300 RN7SKP295-201ENST00000517264 153 ntBASIC1.41□□□□□ -2.18
LRRTM2O43300 AC024995.1-201ENST00000523014 93 ntBASIC1.41□□□□□ -2.18
LRRTM2O43300 AL161670.1-201ENST00000554348 137 ntBASIC1.41□□□□□ -2.18
LRRTM2O43300 AC020661.2-201ENST00000560114 134 ntBASIC1.41□□□□□ -2.18
LRRTM2O43300 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.41□□□□□ -2.18
LRRTM2O43300 MIR4421-201ENST00000578133 69 ntBASIC1.41□□□□□ -2.18
LRRTM2O43300 MIR4659A-201ENST00000580269 81 ntBASIC1.41□□□□□ -2.18
LRRTM2O43300 MIR4452-201ENST00000583004 71 ntBASIC1.41□□□□□ -2.18
LRRTM2O43300 PRR13P7-201ENST00000605538 430 ntBASIC1.41□□□□□ -2.18
LRRTM2O43300 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.41□□□□□ -2.18
LRRTM2O43300 AC090574.1-201ENST00000623186 233 ntBASIC1.41□□□□□ -2.18
LRRTM2O43300 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LRRTM2O43300 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
LRRTM2O43300 Y_RNA.39-201ENST00000362620 98 ntBASIC1.4□□□□□ -2.19
LRRTM2O43300 SNORD115-30-201ENST00000364117 82 ntBASIC1.4□□□□□ -2.19
LRRTM2O43300 SNORA72.2-201ENST00000365028 127 ntBASIC1.4□□□□□ -2.19
LRRTM2O43300 Y_RNA.458-201ENST00000384240 102 ntBASIC1.4□□□□□ -2.19
LRRTM2O43300 MIR517C-201ENST00000385103 95 ntBASIC1.4□□□□□ -2.19
LRRTM2O43300 SNORA12.1-201ENST00000390873 148 ntBASIC1.4□□□□□ -2.19
LRRTM2O43300 MIR1302-11-201ENST00000408051 138 ntBASIC1.4□□□□□ -2.19
LRRTM2O43300 MIR1302-9-201ENST00000408365 138 ntBASIC1.4□□□□□ -2.19
LRRTM2O43300 MIR1302-10-201ENST00000408734 138 ntBASIC1.4□□□□□ -2.19
LRRTM2O43300 RNU6-955P-201ENST00000410497 104 ntBASIC1.4□□□□□ -2.19
LRRTM2O43300 AL354751.2-201ENST00000415471 210 ntBASIC1.4□□□□□ -2.19
LRRTM2O43300 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.4□□□□□ -2.19
LRRTM2O43300 AC005002.2-201ENST00000438228 269 ntBASIC1.4□□□□□ -2.19
LRRTM2O43300 MRPS10P1-201ENST00000448483 130 ntBASIC1.4□□□□□ -2.19
LRRTM2O43300 AL163195.1-201ENST00000496941 348 ntBASIC1.4□□□□□ -2.19
LRRTM2O43300 AC010598.1-201ENST00000510378 103 ntBASIC1.4□□□□□ -2.19
LRRTM2O43300 AC022217.4-201ENST00000604389 163 ntBASIC1.4□□□□□ -2.19
LRRTM2O43300 MIR1302-2-201ENST00000607096 138 ntBASIC1.4□□□□□ -2.19
LRRTM2O43300 AC006157.1-201ENST00000611750 366 ntBASIC1.4□□□□□ -2.19
LRRTM2O43300 AL021879.1-201ENST00000611756 288 ntBASIC1.4□□□□□ -2.19
LRRTM2O43300 PART1_1.1-201ENST00000611761 217 ntBASIC1.4□□□□□ -2.19
LRRTM2O43300 AC091895.1-201ENST00000624494 256 ntBASIC1.4□□□□□ -2.19
LRRTM2O43300 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
LRRTM2O43300 AC091812.1-201ENST00000432235 1948 ntBASIC1.4□□□□□ -2.19
LRRTM2O43300 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
LRRTM2O43300 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
LRRTM2O43300 SNORA27.1-201ENST00000362604 124 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 Y_RNA.124-201ENST00000363339 93 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 SNORA4.2-201ENST00000365313 147 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 RNU6-117P-201ENST00000365415 107 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 RNU6-20P-201ENST00000384106 107 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 Y_RNA.445-201ENST00000384168 102 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 MIR520A-201ENST00000384862 85 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 MIR628-201ENST00000385229 95 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 RPL21P1-201ENST00000399532 476 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 RNU6-130P-201ENST00000411112 103 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 AL161935.2-201ENST00000414627 60 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 EBAG9P1-201ENST00000418955 543 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 AL160004.2-201ENST00000432935 350 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 RNU1-123P-201ENST00000458950 160 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 Y_RNA.631-201ENST00000459607 101 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 AC023790.1-201ENST00000482174 347 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.39□□□□□ -2.19
LRRTM2O43300 AC097462.1-201ENST00000514125 324 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 RNA5SP61-201ENST00000516453 100 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 Y_RNA.711-201ENST00000516993 102 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 SNORA31.24-201ENST00000517232 57 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 AC023442.1-201ENST00000531247 422 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.39□□□□□ -2.19
LRRTM2O43300 AC004467.1-201ENST00000615678 330 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 AL138825.1-201ENST00000618587 192 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 MIR6734-201ENST00000621166 68 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 AC134503.1-201ENST00000633048 54 ntBASIC1.39□□□□□ -2.19
LRRTM2O43300 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
LRRTM2O43300 RNU1-22P-201ENST00000363334 158 ntBASIC1.38□□□□□ -2.19
LRRTM2O43300 RNU6-271P-201ENST00000363858 105 ntBASIC1.38□□□□□ -2.19
LRRTM2O43300 Y_RNA.570-201ENST00000384750 101 ntBASIC1.38□□□□□ -2.19
LRRTM2O43300 MIR1323-201ENST00000408090 73 ntBASIC1.38□□□□□ -2.19
LRRTM2O43300 MIR1253-201ENST00000408273 105 ntBASIC1.38□□□□□ -2.19
LRRTM2O43300 MTCO3P19-201ENST00000415864 321 ntBASIC1.38□□□□□ -2.19
LRRTM2O43300 MTND1P14-201ENST00000427400 950 ntBASIC1.38□□□□□ -2.19
LRRTM2O43300 HSPE1P9-201ENST00000440046 311 ntBASIC1.38□□□□□ -2.19
LRRTM2O43300 RPEP5-201ENST00000441137 268 ntBASIC1.38□□□□□ -2.19
LRRTM2O43300 AC093852.1-201ENST00000503587 266 ntBASIC1.38□□□□□ -2.19
LRRTM2O43300 RNU7-99P-201ENST00000516271 62 ntBASIC1.38□□□□□ -2.19
LRRTM2O43300 RNA5SP220-201ENST00000516298 104 ntBASIC1.38□□□□□ -2.19
LRRTM2O43300 RNA5SP102-201ENST00000516865 106 ntBASIC1.38□□□□□ -2.19
LRRTM2O43300 RNU6-902P-201ENST00000517212 91 ntBASIC1.38□□□□□ -2.19
LRRTM2O43300 AC023157.2-201ENST00000540596 141 ntBASIC1.38□□□□□ -2.19
LRRTM2O43300 AL137100.2-201ENST00000555786 315 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 214.8 ms