Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC009229.3-201ENST00000608056 282 ntBASIC0.53□□□□□ -2.32
LSM1O15116 AC007014.2-201ENST00000615581 479 ntBASIC0.53□□□□□ -2.32
LSM1O15116 AC127459.3-201ENST00000624328 466 ntBASIC0.53□□□□□ -2.32
LSM1O15116 MIR1321-201ENST00000637766 79 ntBASIC0.53□□□□□ -2.32
LSM1O15116 Y_RNA.38-201ENST00000362617 102 ntBASIC0.52□□□□□ -2.33
LSM1O15116 Y_RNA.164-201ENST00000363709 102 ntBASIC0.52□□□□□ -2.33
LSM1O15116 RNU6-454P-201ENST00000364292 107 ntBASIC0.52□□□□□ -2.33
LSM1O15116 SNORD116-9-201ENST00000384000 95 ntBASIC0.52□□□□□ -2.33
LSM1O15116 SNORD116-3-201ENST00000384287 95 ntBASIC0.52□□□□□ -2.33
LSM1O15116 SNORD116-7-201ENST00000384404 95 ntBASIC0.52□□□□□ -2.33
LSM1O15116 SNORD116-5-201ENST00000384462 95 ntBASIC0.52□□□□□ -2.33
LSM1O15116 MIR499A-201ENST00000384903 122 ntBASIC0.52□□□□□ -2.33
LSM1O15116 SNORD99-201ENST00000408612 74 ntBASIC0.52□□□□□ -2.33
LSM1O15116 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.52□□□□□ -2.33
LSM1O15116 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.52□□□□□ -2.33
LSM1O15116 AC025627.3-201ENST00000582078 182 ntBASIC0.52□□□□□ -2.33
LSM1O15116 AL442644.1-201ENST00000454390 3105 ntBASIC0.52□□□□□ -2.33
LSM1O15116 MIR103A2-201ENST00000362154 78 ntBASIC0.51□□□□□ -2.33
LSM1O15116 RNU6-842P-201ENST00000384269 107 ntBASIC0.51□□□□□ -2.33
LSM1O15116 MIR452-201ENST00000385020 85 ntBASIC0.51□□□□□ -2.33
LSM1O15116 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.51□□□□□ -2.33
LSM1O15116 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.51□□□□□ -2.33
LSM1O15116 UQCRBP2-201ENST00000447827 297 ntBASIC0.51□□□□□ -2.33
LSM1O15116 PCNPP5-201ENST00000452246 481 ntBASIC0.51□□□□□ -2.33
LSM1O15116 SUMO1P2-201ENST00000452524 304 ntBASIC0.51□□□□□ -2.33
LSM1O15116 RNU6-1110P-201ENST00000516462 101 ntBASIC0.51□□□□□ -2.33
LSM1O15116 Y_RNA.706-201ENST00000516933 99 ntBASIC0.51□□□□□ -2.33
LSM1O15116 MIR4273-201ENST00000582824 84 ntBASIC0.51□□□□□ -2.33
LSM1O15116 MIR6788-201ENST00000618842 66 ntBASIC0.51□□□□□ -2.33
LSM1O15116 MTND5P16-201ENST00000460269 1703 ntBASIC0.5□□□□□ -2.33
LSM1O15116 Y_RNA.243-201ENST00000364481 109 ntBASIC0.5□□□□□ -2.33
LSM1O15116 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.5□□□□□ -2.33
LSM1O15116 SNORD89-201ENST00000390981 114 ntBASIC0.5□□□□□ -2.33
LSM1O15116 RPS29P1-201ENST00000465274 159 ntBASIC0.5□□□□□ -2.33
LSM1O15116 AC114811.1-201ENST00000507207 168 ntBASIC0.5□□□□□ -2.33
LSM1O15116 RNU7-41P-201ENST00000515917 61 ntBASIC0.5□□□□□ -2.33
LSM1O15116 RNU6-864P-201ENST00000516256 108 ntBASIC0.5□□□□□ -2.33
LSM1O15116 SNORA74.3-201ENST00000517108 154 ntBASIC0.5□□□□□ -2.33
LSM1O15116 AC018659.1-201ENST00000551083 169 ntBASIC0.5□□□□□ -2.33
LSM1O15116 AC023827.1-201ENST00000569247 97 ntBASIC0.5□□□□□ -2.33
LSM1O15116 RNU6-1059P-201ENST00000363752 98 ntBASIC0.49□□□□□ -2.33
LSM1O15116 Y_RNA.330-201ENST00000365230 109 ntBASIC0.49□□□□□ -2.33
LSM1O15116 AC117470.1-201ENST00000381974 330 ntBASIC0.49□□□□□ -2.33
LSM1O15116 MIR1298-201ENST00000408783 112 ntBASIC0.49□□□□□ -2.33
LSM1O15116 PIGPP3-201ENST00000425307 415 ntBASIC0.49□□□□□ -2.33
LSM1O15116 SNORD5.1-201ENST00000458800 75 ntBASIC0.49□□□□□ -2.33
LSM1O15116 Y_RNA.688-201ENST00000516565 95 ntBASIC0.49□□□□□ -2.33
LSM1O15116 AC023442.1-201ENST00000531247 422 ntBASIC0.49□□□□□ -2.33
LSM1O15116 AC018448.1-201ENST00000552843 316 ntBASIC0.49□□□□□ -2.33
LSM1O15116 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.49□□□□□ -2.33
LSM1O15116 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.49□□□□□ -2.33
LSM1O15116 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
LSM1O15116 AC244015.1-201ENST00000622301 99 ntBASIC0.49□□□□□ -2.33
LSM1O15116 RNA5SP499-201ENST00000363982 119 ntBASIC0.48□□□□□ -2.33
LSM1O15116 MIR548J-201ENST00000408833 112 ntBASIC0.48□□□□□ -2.33
LSM1O15116 USP9YP30-201ENST00000430729 455 ntBASIC0.48□□□□□ -2.33
LSM1O15116 MTND1P17-201ENST00000448961 204 ntBASIC0.48□□□□□ -2.33
LSM1O15116 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.48□□□□□ -2.33
LSM1O15116 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.48□□□□□ -2.33
LSM1O15116 AC036111.3-201ENST00000526389 112 ntBASIC0.48□□□□□ -2.33
LSM1O15116 MIR151B-201ENST00000584249 96 ntBASIC0.48□□□□□ -2.33
LSM1O15116 AC104260.1-201ENST00000616660 539 ntBASIC0.48□□□□□ -2.33
LSM1O15116 AC024614.3-201ENST00000637860 256 ntBASIC0.48□□□□□ -2.33
LSM1O15116 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
LSM1O15116 RNA5SP347-201ENST00000362445 119 ntBASIC0.47□□□□□ -2.33
LSM1O15116 RNU6-945P-201ENST00000383947 107 ntBASIC0.47□□□□□ -2.33
LSM1O15116 MIR190B-201ENST00000401119 79 ntBASIC0.47□□□□□ -2.33
LSM1O15116 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.47□□□□□ -2.33
LSM1O15116 AC244098.3-201ENST00000424803 96 ntBASIC0.47□□□□□ -2.33
LSM1O15116 RNU6-1088P-201ENST00000516850 104 ntBASIC0.47□□□□□ -2.33
LSM1O15116 AC105029.1-201ENST00000520250 669 ntBASIC0.47□□□□□ -2.33
LSM1O15116 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.47□□□□□ -2.33
LSM1O15116 MIR5000-201ENST00000577717 103 ntBASIC0.47□□□□□ -2.33
LSM1O15116 MIR4714-201ENST00000580728 77 ntBASIC0.47□□□□□ -2.33
LSM1O15116 AC090617.10-201ENST00000624308 134 ntBASIC0.47□□□□□ -2.33
LSM1O15116 RNU6-874P-201ENST00000362390 105 ntBASIC0.46□□□□□ -2.34
LSM1O15116 SNORA25.3-201ENST00000363205 127 ntBASIC0.46□□□□□ -2.34
LSM1O15116 Y_RNA.364-201ENST00000365532 101 ntBASIC0.46□□□□□ -2.34
LSM1O15116 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
LSM1O15116 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.46□□□□□ -2.34
LSM1O15116 MIR1302-7-201ENST00000408841 72 ntBASIC0.46□□□□□ -2.34
LSM1O15116 RNU6-1148P-201ENST00000410992 104 ntBASIC0.46□□□□□ -2.34
LSM1O15116 AL354751.2-201ENST00000415471 210 ntBASIC0.46□□□□□ -2.34
LSM1O15116 AL392103.1-201ENST00000447000 198 ntBASIC0.46□□□□□ -2.34
LSM1O15116 RNU6-63P-201ENST00000516690 95 ntBASIC0.46□□□□□ -2.34
LSM1O15116 MTND3P12-201ENST00000559068 328 ntBASIC0.46□□□□□ -2.34
LSM1O15116 AL591926.4-201ENST00000616895 298 ntBASIC0.46□□□□□ -2.34
LSM1O15116 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.46□□□□□ -2.34
LSM1O15116 MIR3674-201ENST00000636576 68 ntBASIC0.46□□□□□ -2.34
LSM1O15116 RNU6-1297P-201ENST00000384415 104 ntBASIC0.45□□□□□ -2.34
LSM1O15116 RNU2-16P-201ENST00000410712 136 ntBASIC0.45□□□□□ -2.34
LSM1O15116 MRPS18CP6-201ENST00000423587 223 ntBASIC0.45□□□□□ -2.34
LSM1O15116 DLGAP5P1-201ENST00000430307 464 ntBASIC0.45□□□□□ -2.34
LSM1O15116 RNU11-2P-201ENST00000516898 142 ntBASIC0.45□□□□□ -2.34
LSM1O15116 MIR4764-201ENST00000580680 88 ntBASIC0.45□□□□□ -2.34
LSM1O15116 7SK.10-201ENST00000621414 298 ntBASIC0.45□□□□□ -2.34
LSM1O15116 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
LSM1O15116 SNORD68-201ENST00000363214 84 ntBASIC0.44□□□□□ -2.34
LSM1O15116 RNU6-318P-201ENST00000384283 103 ntBASIC0.44□□□□□ -2.34
LSM1O15116 RNU6-136P-201ENST00000384663 107 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms