Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC008521.1-201ENST00000587471 187 ntBASIC-1.15□□□□□ -2.59
CHD1O14646 AP001836.1-201ENST00000604675 523 ntBASIC-1.15□□□□□ -2.59
CHD1O14646 uc_338.4-201ENST00000616635 176 ntBASIC-1.15□□□□□ -2.59
CHD1O14646 MIR6828-201ENST00000636181 60 ntBASIC-1.15□□□□□ -2.59
CHD1O14646 AC004866.1-201ENST00000411748 78 ntBASIC-1.15□□□□□ -2.59
CHD1O14646 AL365184.2-201ENST00000431139 435 ntBASIC-1.15□□□□□ -2.59
CHD1O14646 RNU6-430P-201ENST00000517078 107 ntBASIC-1.15□□□□□ -2.59
CHD1O14646 FRG2DP-202ENST00000566967 323 ntBASIC-1.15□□□□□ -2.59
CHD1O14646 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.16□□□□□ -2.6
CHD1O14646 Y_RNA.480-201ENST00000384364 102 ntBASIC-1.16□□□□□ -2.6
CHD1O14646 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-1.16□□□□□ -2.6
CHD1O14646 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.16□□□□□ -2.6
CHD1O14646 AC116562.3-201ENST00000506136 177 ntBASIC-1.16□□□□□ -2.6
CHD1O14646 AC097462.1-201ENST00000514125 324 ntBASIC-1.16□□□□□ -2.6
CHD1O14646 RNU6-1291P-201ENST00000516591 104 ntBASIC-1.16□□□□□ -2.6
CHD1O14646 AC018448.1-201ENST00000552843 316 ntBASIC-1.16□□□□□ -2.6
CHD1O14646 AC120024.3-201ENST00000603167 156 ntBASIC-1.16□□□□□ -2.6
CHD1O14646 MIR377-201ENST00000362145 69 ntBASIC-1.17□□□□□ -2.6
CHD1O14646 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.17□□□□□ -2.6
CHD1O14646 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.17□□□□□ -2.6
CHD1O14646 AC010424.1-201ENST00000506336 297 ntBASIC-1.17□□□□□ -2.6
CHD1O14646 AC079140.5-201ENST00000507882 310 ntBASIC-1.17□□□□□ -2.6
CHD1O14646 AC107934.1-201ENST00000522215 217 ntBASIC-1.17□□□□□ -2.6
CHD1O14646 AC006600.1-201ENST00000572529 153 ntBASIC-1.17□□□□□ -2.6
CHD1O14646 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-1.17□□□□□ -2.6
CHD1O14646 MIR3152-201ENST00000579801 74 ntBASIC-1.17□□□□□ -2.6
CHD1O14646 SNORD68-201ENST00000363214 84 ntBASIC-1.18□□□□□ -2.6
CHD1O14646 RNU6-811P-201ENST00000384069 107 ntBASIC-1.18□□□□□ -2.6
CHD1O14646 MIR501-201ENST00000390204 84 ntBASIC-1.18□□□□□ -2.6
CHD1O14646 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.18□□□□□ -2.6
CHD1O14646 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-1.18□□□□□ -2.6
CHD1O14646 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.18□□□□□ -2.6
CHD1O14646 RNU7-172P-201ENST00000517125 64 ntBASIC-1.18□□□□□ -2.6
CHD1O14646 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.18□□□□□ -2.6
CHD1O14646 MIR655-201ENST00000362159 97 ntBASIC-1.18□□□□□ -2.6
CHD1O14646 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.18□□□□□ -2.6
CHD1O14646 RNU6-207P-201ENST00000384137 107 ntBASIC-1.18□□□□□ -2.6
CHD1O14646 MIR15B-201ENST00000385045 98 ntBASIC-1.18□□□□□ -2.6
CHD1O14646 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-1.18□□□□□ -2.6
CHD1O14646 AC046134.1-201ENST00000514454 666 ntBASIC-1.18□□□□□ -2.6
CHD1O14646 RNA5SP54-201ENST00000516951 92 ntBASIC-1.18□□□□□ -2.6
CHD1O14646 AL590491.3-201ENST00000610731 82 ntBASIC-1.18□□□□□ -2.6
CHD1O14646 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.19□□□□□ -2.6
CHD1O14646 RNU6-354P-201ENST00000383862 107 ntBASIC-1.19□□□□□ -2.6
CHD1O14646 RNU6-610P-201ENST00000384264 107 ntBASIC-1.19□□□□□ -2.6
CHD1O14646 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.19□□□□□ -2.6
CHD1O14646 SNORD123-201ENST00000459473 70 ntBASIC-1.19□□□□□ -2.6
CHD1O14646 RNU6-551P-201ENST00000516661 103 ntBASIC-1.19□□□□□ -2.6
CHD1O14646 RNU6-201P-201ENST00000517100 61 ntBASIC-1.19□□□□□ -2.6
CHD1O14646 AC090572.1-201ENST00000519251 160 ntBASIC-1.19□□□□□ -2.6
CHD1O14646 AC090617.3-201ENST00000573670 475 ntBASIC-1.19□□□□□ -2.6
CHD1O14646 AL139022.2-201ENST00000606934 443 ntBASIC-1.19□□□□□ -2.6
CHD1O14646 RNU6-792P-201ENST00000363490 107 ntBASIC-1.2□□□□□ -2.6
CHD1O14646 RNU6-137P-201ENST00000363680 108 ntBASIC-1.2□□□□□ -2.6
CHD1O14646 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.2□□□□□ -2.6
CHD1O14646 MIR563-201ENST00000385080 79 ntBASIC-1.2□□□□□ -2.6
CHD1O14646 SNORA75.1-201ENST00000391130 148 ntBASIC-1.2□□□□□ -2.6
CHD1O14646 AC092447.3-201ENST00000426027 686 ntBASIC-1.2□□□□□ -2.6
CHD1O14646 MTND1P32-201ENST00000433043 938 ntBASIC-1.2□□□□□ -2.6
CHD1O14646 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.2□□□□□ -2.6
CHD1O14646 AC010486.3-201ENST00000511602 785 ntBASIC-1.2□□□□□ -2.6
CHD1O14646 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.2□□□□□ -2.6
CHD1O14646 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.2□□□□□ -2.6
CHD1O14646 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.2□□□□□ -2.6
CHD1O14646 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.2□□□□□ -2.6
CHD1O14646 RNU6-205P-201ENST00000390858 107 ntBASIC-1.2□□□□□ -2.6
CHD1O14646 MTCO3P19-201ENST00000415864 321 ntBASIC-1.2□□□□□ -2.6
CHD1O14646 CALM2P2-201ENST00000428512 440 ntBASIC-1.2□□□□□ -2.6
CHD1O14646 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.2□□□□□ -2.6
CHD1O14646 SUMO1P2-201ENST00000452524 304 ntBASIC-1.2□□□□□ -2.6
CHD1O14646 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.2□□□□□ -2.6
CHD1O14646 RNU6-135P-201ENST00000516769 101 ntBASIC-1.2□□□□□ -2.6
CHD1O14646 RNA5SP454-201ENST00000517231 127 ntBASIC-1.2□□□□□ -2.6
CHD1O14646 MIR4306-201ENST00000583390 91 ntBASIC-1.2□□□□□ -2.6
CHD1O14646 AC010608.3-201ENST00000625048 527 ntBASIC-1.2□□□□□ -2.6
CHD1O14646 RNU6-61P-201ENST00000365528 109 ntBASIC-1.21□□□□□ -2.6
CHD1O14646 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.21□□□□□ -2.6
CHD1O14646 RNU6-387P-201ENST00000411331 105 ntBASIC-1.21□□□□□ -2.6
CHD1O14646 AL358934.1-201ENST00000432346 324 ntBASIC-1.21□□□□□ -2.6
CHD1O14646 AC138749.4-201ENST00000563970 127 ntBASIC-1.21□□□□□ -2.6
CHD1O14646 RNU1-29P-201ENST00000606574 126 ntBASIC-1.21□□□□□ -2.6
CHD1O14646 AC072039.2-201ENST00000608883 439 ntBASIC-1.21□□□□□ -2.6
CHD1O14646 AC137590.2-201ENST00000619709 240 ntBASIC-1.21□□□□□ -2.6
CHD1O14646 SNORA43.4-201ENST00000629559 138 ntBASIC-1.21□□□□□ -2.6
CHD1O14646 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.21□□□□□ -2.6
CHD1O14646 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.22□□□□□ -2.6
CHD1O14646 RNU7-185P-201ENST00000459215 60 ntBASIC-1.22□□□□□ -2.6
CHD1O14646 AC063944.3-201ENST00000609969 533 ntBASIC-1.22□□□□□ -2.6
CHD1O14646 MIR8084-201ENST00000614105 89 ntBASIC-1.22□□□□□ -2.6
CHD1O14646 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.22□□□□□ -2.6
CHD1O14646 AC022306.2-201ENST00000617563 647 ntBASIC-1.22□□□□□ -2.6
CHD1O14646 SNORD115-2-201ENST00000362842 82 ntBASIC-1.23□□□□□ -2.61
CHD1O14646 SNORD45.3-201ENST00000363836 72 ntBASIC-1.23□□□□□ -2.61
CHD1O14646 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.23□□□□□ -2.61
CHD1O14646 SCARNA4-201ENST00000629045 128 ntBASIC-1.23□□□□□ -2.61
CHD1O14646 RNU6-245P-201ENST00000384020 107 ntBASIC-1.23□□□□□ -2.61
CHD1O14646 MIR1284-201ENST00000408337 120 ntBASIC-1.23□□□□□ -2.61
CHD1O14646 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.23□□□□□ -2.61
CHD1O14646 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-1.23□□□□□ -2.61
CHD1O14646 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms