Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RNA5SP222-201ENST00000411039 105 ntBASIC0.28□□□□□ -2.36
UBFD1O14562 MTCYBP10-201ENST00000424905 650 ntBASIC0.28□□□□□ -2.36
UBFD1O14562 MTCO1P19-201ENST00000443487 500 ntBASIC0.28□□□□□ -2.36
UBFD1O14562 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.28□□□□□ -2.36
UBFD1O14562 HMGN1P10-201ENST00000474557 553 ntBASIC0.28□□□□□ -2.36
UBFD1O14562 AC114811.1-201ENST00000507207 168 ntBASIC0.28□□□□□ -2.36
UBFD1O14562 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.28□□□□□ -2.36
UBFD1O14562 RN7SKP164-201ENST00000516138 266 ntBASIC0.28□□□□□ -2.36
UBFD1O14562 LRRC34P1-201ENST00000542742 915 ntBASIC0.28□□□□□ -2.36
UBFD1O14562 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.28□□□□□ -2.36
UBFD1O14562 MTND1P15-201ENST00000579262 949 ntBASIC0.28□□□□□ -2.36
UBFD1O14562 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.28□□□□□ -2.36
UBFD1O14562 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.28□□□□□ -2.36
UBFD1O14562 Y_RNA.231-201ENST00000364358 102 ntBASIC0.27□□□□□ -2.37
UBFD1O14562 RNU6-117P-201ENST00000365415 107 ntBASIC0.27□□□□□ -2.37
UBFD1O14562 Y_RNA.359-201ENST00000365498 102 ntBASIC0.27□□□□□ -2.37
UBFD1O14562 Y_RNA.373-201ENST00000365600 103 ntBASIC0.27□□□□□ -2.37
UBFD1O14562 Y_RNA.405-201ENST00000383979 100 ntBASIC0.27□□□□□ -2.37
UBFD1O14562 Y_RNA.433-201ENST00000384089 102 ntBASIC0.27□□□□□ -2.37
UBFD1O14562 Y_RNA.451-201ENST00000384200 100 ntBASIC0.27□□□□□ -2.37
UBFD1O14562 Y_RNA.524-201ENST00000384564 100 ntBASIC0.27□□□□□ -2.37
UBFD1O14562 Y_RNA.561-201ENST00000384694 100 ntBASIC0.27□□□□□ -2.37
UBFD1O14562 MIR517A-201ENST00000385001 87 ntBASIC0.27□□□□□ -2.37
UBFD1O14562 MIR1298-201ENST00000408783 112 ntBASIC0.27□□□□□ -2.37
UBFD1O14562 Y_RNA.615-201ENST00000410769 117 ntBASIC0.27□□□□□ -2.37
UBFD1O14562 AL137792.2-201ENST00000443484 235 ntBASIC0.27□□□□□ -2.37
UBFD1O14562 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.27□□□□□ -2.37
UBFD1O14562 SNORA68.3-201ENST00000515906 83 ntBASIC0.27□□□□□ -2.37
UBFD1O14562 RNU6-1110P-201ENST00000516462 101 ntBASIC0.27□□□□□ -2.37
UBFD1O14562 RNU6-63P-201ENST00000516690 95 ntBASIC0.27□□□□□ -2.37
UBFD1O14562 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.27□□□□□ -2.37
UBFD1O14562 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.27□□□□□ -2.37
UBFD1O14562 MIR5696-201ENST00000578474 85 ntBASIC0.27□□□□□ -2.37
UBFD1O14562 AC120024.3-201ENST00000603167 156 ntBASIC0.27□□□□□ -2.37
UBFD1O14562 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.27□□□□□ -2.37
UBFD1O14562 AC068137.4-201ENST00000638485 296 ntBASIC0.27□□□□□ -2.37
UBFD1O14562 SNORA36.2-201ENST00000384004 127 ntBASIC0.26□□□□□ -2.37
UBFD1O14562 RNU6-163P-201ENST00000384396 106 ntBASIC0.26□□□□□ -2.37
UBFD1O14562 Y_RNA.533-201ENST00000384596 114 ntBASIC0.26□□□□□ -2.37
UBFD1O14562 MIR516B2-201ENST00000385190 85 ntBASIC0.26□□□□□ -2.37
UBFD1O14562 ELOCP21-201ENST00000412558 336 ntBASIC0.26□□□□□ -2.37
UBFD1O14562 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.26□□□□□ -2.37
UBFD1O14562 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.26□□□□□ -2.37
UBFD1O14562 RNU6-956P-201ENST00000458868 103 ntBASIC0.26□□□□□ -2.37
UBFD1O14562 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
UBFD1O14562 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.26□□□□□ -2.37
UBFD1O14562 RN7SKP298-201ENST00000515950 94 ntBASIC0.26□□□□□ -2.37
UBFD1O14562 RNU6-1096P-201ENST00000517089 102 ntBASIC0.26□□□□□ -2.37
UBFD1O14562 ZNF519P2-201ENST00000557032 169 ntBASIC0.26□□□□□ -2.37
UBFD1O14562 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.26□□□□□ -2.37
UBFD1O14562 AL138726.1-201ENST00000614873 333 ntBASIC0.26□□□□□ -2.37
UBFD1O14562 AL357075.2-201ENST00000614906 189 ntBASIC0.26□□□□□ -2.37
UBFD1O14562 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
UBFD1O14562 RNU6-1322P-201ENST00000364309 107 ntBASIC0.25□□□□□ -2.37
UBFD1O14562 RNU6-654P-201ENST00000364373 107 ntBASIC0.25□□□□□ -2.37
UBFD1O14562 RNU6-128P-201ENST00000383976 107 ntBASIC0.25□□□□□ -2.37
UBFD1O14562 Y_RNA.412-201ENST00000384001 104 ntBASIC0.25□□□□□ -2.37
UBFD1O14562 MIR562-201ENST00000384894 95 ntBASIC0.25□□□□□ -2.37
UBFD1O14562 MIR520C-201ENST00000385005 87 ntBASIC0.25□□□□□ -2.37
UBFD1O14562 AC243428.1-201ENST00000421099 264 ntBASIC0.25□□□□□ -2.37
UBFD1O14562 MRPS18CP6-201ENST00000423587 223 ntBASIC0.25□□□□□ -2.37
UBFD1O14562 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.25□□□□□ -2.37
UBFD1O14562 MTND3P23-201ENST00000431980 347 ntBASIC0.25□□□□□ -2.37
UBFD1O14562 ERLEC1P1-201ENST00000433806 578 ntBASIC0.25□□□□□ -2.37
UBFD1O14562 AC093019.1-201ENST00000443135 252 ntBASIC0.25□□□□□ -2.37
UBFD1O14562 PCNPP5-201ENST00000452246 481 ntBASIC0.25□□□□□ -2.37
UBFD1O14562 AC046134.1-201ENST00000514454 666 ntBASIC0.25□□□□□ -2.37
UBFD1O14562 Y_RNA.665-201ENST00000516177 98 ntBASIC0.25□□□□□ -2.37
UBFD1O14562 Y_RNA.683-201ENST00000516508 93 ntBASIC0.25□□□□□ -2.37
UBFD1O14562 AC134698.4-201ENST00000523451 826 ntBASIC0.25□□□□□ -2.37
UBFD1O14562 AF235103.2-201ENST00000525753 346 ntBASIC0.25□□□□□ -2.37
UBFD1O14562 AC010620.1-201ENST00000601088 1102 ntBASIC0.25□□□□□ -2.37
UBFD1O14562 Z83818.1-201ENST00000603584 150 ntBASIC0.25□□□□□ -2.37
UBFD1O14562 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.25□□□□□ -2.37
UBFD1O14562 MIR2909-201ENST00000617113 69 ntBASIC0.25□□□□□ -2.37
UBFD1O14562 AC127459.3-201ENST00000624328 466 ntBASIC0.25□□□□□ -2.37
UBFD1O14562 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
UBFD1O14562 SNORD68-201ENST00000363214 84 ntBASIC0.24□□□□□ -2.37
UBFD1O14562 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
UBFD1O14562 Y_RNA.582-201ENST00000391023 95 ntBASIC0.24□□□□□ -2.37
UBFD1O14562 MIR1302-7-201ENST00000408841 72 ntBASIC0.24□□□□□ -2.37
UBFD1O14562 RNU6-1001P-201ENST00000411265 100 ntBASIC0.24□□□□□ -2.37
UBFD1O14562 MTATP6P13-201ENST00000438531 667 ntBASIC0.24□□□□□ -2.37
UBFD1O14562 CYCTP-201ENST00000504253 315 ntBASIC0.24□□□□□ -2.37
UBFD1O14562 ACA59.1-201ENST00000515966 143 ntBASIC0.24□□□□□ -2.37
UBFD1O14562 SNORA74.3-201ENST00000517108 154 ntBASIC0.24□□□□□ -2.37
UBFD1O14562 AC093023.1-201ENST00000547375 507 ntBASIC0.24□□□□□ -2.37
UBFD1O14562 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.24□□□□□ -2.37
UBFD1O14562 AC145350.1-201ENST00000567426 208 ntBASIC0.24□□□□□ -2.37
UBFD1O14562 MIR3672-201ENST00000584290 82 ntBASIC0.24□□□□□ -2.37
UBFD1O14562 MIR4760-201ENST00000585040 80 ntBASIC0.24□□□□□ -2.37
UBFD1O14562 AC010525.2-201ENST00000590920 195 ntBASIC0.24□□□□□ -2.37
UBFD1O14562 AC019193.3-201ENST00000609144 554 ntBASIC0.24□□□□□ -2.37
UBFD1O14562 AC023510.2-201ENST00000622162 746 ntBASIC0.24□□□□□ -2.37
UBFD1O14562 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.24□□□□□ -2.37
UBFD1O14562 MIR6516-201ENST00000630554 81 ntBASIC0.24□□□□□ -2.37
UBFD1O14562 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
UBFD1O14562 RNU6-454P-201ENST00000364292 107 ntBASIC0.23□□□□□ -2.37
UBFD1O14562 RNU6-306P-201ENST00000384617 107 ntBASIC0.23□□□□□ -2.37
UBFD1O14562 RNU6-1067P-201ENST00000384752 107 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 199.1 ms