Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 SNORD116-5-201ENST00000384462 95 ntBASIC0.43□□□□□ -2.34
UPK1AO00322 RNU6-1105P-201ENST00000384774 107 ntBASIC0.43□□□□□ -2.34
UPK1AO00322 MIR873-201ENST00000401120 77 ntBASIC0.43□□□□□ -2.34
UPK1AO00322 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.43□□□□□ -2.34
UPK1AO00322 RNA5SP475-201ENST00000410568 110 ntBASIC0.43□□□□□ -2.34
UPK1AO00322 Y_RNA.621-201ENST00000411065 96 ntBASIC0.43□□□□□ -2.34
UPK1AO00322 AC098934.3-201ENST00000430450 190 ntBASIC0.43□□□□□ -2.34
UPK1AO00322 snoU13.25-201ENST00000458945 104 ntBASIC0.43□□□□□ -2.34
UPK1AO00322 U7.7-201ENST00000459276 60 ntBASIC0.43□□□□□ -2.34
UPK1AO00322 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.43□□□□□ -2.34
UPK1AO00322 RNU4-54P-201ENST00000516428 129 ntBASIC0.43□□□□□ -2.34
UPK1AO00322 RNU6-1223P-201ENST00000517124 104 ntBASIC0.43□□□□□ -2.34
UPK1AO00322 RNU1-54P-201ENST00000517181 120 ntBASIC0.43□□□□□ -2.34
UPK1AO00322 AC109810.1-201ENST00000534066 224 ntBASIC0.43□□□□□ -2.34
UPK1AO00322 AC104260.1-201ENST00000616660 539 ntBASIC0.43□□□□□ -2.34
UPK1AO00322 SEPT14P17-201ENST00000617978 177 ntBASIC0.43□□□□□ -2.34
UPK1AO00322 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.43□□□□□ -2.34
UPK1AO00322 AL008636.1-201ENST00000625038 1018 ntBASIC0.43□□□□□ -2.34
UPK1AO00322 U6.115-201ENST00000636045 103 ntBASIC0.43□□□□□ -2.34
UPK1AO00322 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
UPK1AO00322 RNU6-451P-201ENST00000362921 107 ntBASIC0.42□□□□□ -2.34
UPK1AO00322 RNY3P3-201ENST00000363816 102 ntBASIC0.42□□□□□ -2.34
UPK1AO00322 RNU6-1335P-201ENST00000365426 107 ntBASIC0.42□□□□□ -2.34
UPK1AO00322 MIR520C-201ENST00000385005 87 ntBASIC0.42□□□□□ -2.34
UPK1AO00322 ELOCP21-201ENST00000412558 336 ntBASIC0.42□□□□□ -2.34
UPK1AO00322 AL162725.1-201ENST00000435405 301 ntBASIC0.42□□□□□ -2.34
UPK1AO00322 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.42□□□□□ -2.34
UPK1AO00322 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.42□□□□□ -2.34
UPK1AO00322 SUMO1P2-201ENST00000452524 304 ntBASIC0.42□□□□□ -2.34
UPK1AO00322 RNU7-87P-201ENST00000459343 62 ntBASIC0.42□□□□□ -2.34
UPK1AO00322 AC098869.1-201ENST00000481627 292 ntBASIC0.42□□□□□ -2.34
UPK1AO00322 AC074133.1-201ENST00000515696 183 ntBASIC0.42□□□□□ -2.34
UPK1AO00322 AC131055.1-201ENST00000584626 316 ntBASIC0.42□□□□□ -2.34
UPK1AO00322 AL136317.1-201ENST00000612653 226 ntBASIC0.42□□□□□ -2.34
UPK1AO00322 AC093913.1-201ENST00000614178 329 ntBASIC0.42□□□□□ -2.34
UPK1AO00322 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.41□□□□□ -2.34
UPK1AO00322 SNORA25.3-201ENST00000363205 127 ntBASIC0.41□□□□□ -2.34
UPK1AO00322 RNU6-879P-201ENST00000364328 108 ntBASIC0.41□□□□□ -2.34
UPK1AO00322 MIR329-1-201ENST00000385028 80 ntBASIC0.41□□□□□ -2.34
UPK1AO00322 RNU6-994P-201ENST00000410507 111 ntBASIC0.41□□□□□ -2.34
UPK1AO00322 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.41□□□□□ -2.34
UPK1AO00322 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
UPK1AO00322 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.41□□□□□ -2.34
UPK1AO00322 RPL23AP50-201ENST00000434149 455 ntBASIC0.41□□□□□ -2.34
UPK1AO00322 UBE2V1P7-201ENST00000446395 340 ntBASIC0.41□□□□□ -2.34
UPK1AO00322 AC114811.1-201ENST00000507207 168 ntBASIC0.41□□□□□ -2.34
UPK1AO00322 RNU6-229P-201ENST00000516614 102 ntBASIC0.41□□□□□ -2.34
UPK1AO00322 AC023442.1-201ENST00000531247 422 ntBASIC0.41□□□□□ -2.34
UPK1AO00322 MIR3942-201ENST00000585264 109 ntBASIC0.41□□□□□ -2.34
UPK1AO00322 AC125232.2-201ENST00000592457 143 ntBASIC0.41□□□□□ -2.34
UPK1AO00322 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.41□□□□□ -2.34
UPK1AO00322 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.41□□□□□ -2.34
UPK1AO00322 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.34
UPK1AO00322 Y_RNA.38-201ENST00000362617 102 ntBASIC0.4□□□□□ -2.35
UPK1AO00322 SNORD18A-201ENST00000363753 72 ntBASIC0.4□□□□□ -2.35
UPK1AO00322 RNU6-117P-201ENST00000365415 107 ntBASIC0.4□□□□□ -2.35
UPK1AO00322 SNORD14.1-201ENST00000365609 90 ntBASIC0.4□□□□□ -2.35
UPK1AO00322 RNU6-1013P-201ENST00000384180 107 ntBASIC0.4□□□□□ -2.35
UPK1AO00322 RNU6-1297P-201ENST00000384415 104 ntBASIC0.4□□□□□ -2.35
UPK1AO00322 EIF1P2-201ENST00000428233 350 ntBASIC0.4□□□□□ -2.35
UPK1AO00322 AC092423.1-201ENST00000430165 186 ntBASIC0.4□□□□□ -2.35
UPK1AO00322 MTND1P1-201ENST00000445453 368 ntBASIC0.4□□□□□ -2.35
UPK1AO00322 RNU6-625P-201ENST00000459412 107 ntBASIC0.4□□□□□ -2.35
UPK1AO00322 RNU6-1110P-201ENST00000516462 101 ntBASIC0.4□□□□□ -2.35
UPK1AO00322 RNU6-63P-201ENST00000516690 95 ntBASIC0.4□□□□□ -2.35
UPK1AO00322 AC018659.1-201ENST00000551083 169 ntBASIC0.4□□□□□ -2.35
UPK1AO00322 AC018448.1-201ENST00000552843 316 ntBASIC0.4□□□□□ -2.35
UPK1AO00322 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.4□□□□□ -2.35
UPK1AO00322 AL442644.1-201ENST00000454390 3105 ntBASIC0.4□□□□□ -2.35
UPK1AO00322 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
UPK1AO00322 Y_RNA.48-201ENST00000362710 103 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 RNU6-1059P-201ENST00000363752 98 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 Y_RNA.226-201ENST00000364337 114 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 Y_RNA.238-201ENST00000364441 102 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 RNU1-133P-201ENST00000364867 167 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 RNU6-1145P-201ENST00000384246 107 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 MIR15B-201ENST00000385045 98 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 MIR516B2-201ENST00000385190 85 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 MIR136-201ENST00000385207 82 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 RNU6-700P-201ENST00000391043 107 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 MIR190B-201ENST00000401119 79 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 MIR1298-201ENST00000408783 112 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 RNA5SP247-201ENST00000411181 105 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 RNU6-373P-201ENST00000411247 98 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.39□□□□□ -2.35
UPK1AO00322 AC009161.1-201ENST00000417306 376 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 USP9YP30-201ENST00000430729 455 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.39□□□□□ -2.35
UPK1AO00322 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.39□□□□□ -2.35
UPK1AO00322 MTND4LP16-201ENST00000440828 295 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.39□□□□□ -2.35
UPK1AO00322 RNU4-57P-201ENST00000515980 135 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 Y_RNA.688-201ENST00000516565 95 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 SNORA74.3-201ENST00000517108 154 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.39□□□□□ -2.35
UPK1AO00322 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.39□□□□□ -2.35
UPK1AO00322 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.39□□□□□ -2.35
UPK1AO00322 AL357075.2-201ENST00000614906 189 ntBASIC0.39□□□□□ -2.35
UPK1AO00322 MIR6128-201ENST00000615528 109 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms