Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RNU1-92P-201ENST00000517017 135 ntBASIC1.4□□□□□ -2.19
NPIPA3F8WFD2 RNU2-12P-201ENST00000517216 168 ntBASIC1.4□□□□□ -2.19
NPIPA3F8WFD2 SUMO2P16-201ENST00000519475 264 ntBASIC1.4□□□□□ -2.19
NPIPA3F8WFD2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.4□□□□□ -2.19
NPIPA3F8WFD2 AC015688.6-201ENST00000577737 104 ntBASIC1.4□□□□□ -2.19
NPIPA3F8WFD2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.4□□□□□ -2.19
NPIPA3F8WFD2 AC005828.6-201ENST00000606610 232 ntBASIC1.4□□□□□ -2.19
NPIPA3F8WFD2 AC240442.1-201ENST00000616055 283 ntBASIC1.4□□□□□ -2.19
NPIPA3F8WFD2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.4□□□□□ -2.19
NPIPA3F8WFD2 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.4□□□□□ -2.19
NPIPA3F8WFD2 MIR302D-201ENST00000362275 68 ntBASIC1.39□□□□□ -2.19
NPIPA3F8WFD2 Y_RNA.39-201ENST00000362620 98 ntBASIC1.39□□□□□ -2.19
NPIPA3F8WFD2 Y_RNA.80-201ENST00000362996 102 ntBASIC1.39□□□□□ -2.19
NPIPA3F8WFD2 RNA5SP363-201ENST00000365072 115 ntBASIC1.39□□□□□ -2.19
NPIPA3F8WFD2 RNA5SP259-201ENST00000365541 109 ntBASIC1.39□□□□□ -2.19
NPIPA3F8WFD2 Y_RNA.485-201ENST00000384395 102 ntBASIC1.39□□□□□ -2.19
NPIPA3F8WFD2 MIR517C-201ENST00000385103 95 ntBASIC1.39□□□□□ -2.19
NPIPA3F8WFD2 MIR513A1-201ENST00000385138 129 ntBASIC1.39□□□□□ -2.19
NPIPA3F8WFD2 RNU11-5P-201ENST00000391216 129 ntBASIC1.39□□□□□ -2.19
NPIPA3F8WFD2 AL034345.1-201ENST00000407768 123 ntBASIC1.39□□□□□ -2.19
NPIPA3F8WFD2 MIR1323-201ENST00000408090 73 ntBASIC1.39□□□□□ -2.19
NPIPA3F8WFD2 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.39□□□□□ -2.19
NPIPA3F8WFD2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.39□□□□□ -2.19
NPIPA3F8WFD2 STAG3L5P-204ENST00000443759 179 ntBASIC1.39□□□□□ -2.19
NPIPA3F8WFD2 AC009474.2-201ENST00000451383 136 ntBASIC1.39□□□□□ -2.19
NPIPA3F8WFD2 TRMT112P2-201ENST00000512910 132 ntBASIC1.39□□□□□ -2.19
NPIPA3F8WFD2 RNU6-976P-201ENST00000516086 111 ntBASIC1.39□□□□□ -2.19
NPIPA3F8WFD2 RNU6-1278P-201ENST00000516130 107 ntBASIC1.39□□□□□ -2.19
NPIPA3F8WFD2 MIR3937-201ENST00000580135 106 ntBASIC1.39□□□□□ -2.19
NPIPA3F8WFD2 AL390123.1-201ENST00000603216 237 ntBASIC1.39□□□□□ -2.19
NPIPA3F8WFD2 AC091925.1-201ENST00000623204 462 ntBASIC1.39□□□□□ -2.19
NPIPA3F8WFD2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
NPIPA3F8WFD2 RNU6-324P-201ENST00000363957 106 ntBASIC1.38□□□□□ -2.19
NPIPA3F8WFD2 SNORD115-30-201ENST00000364117 82 ntBASIC1.38□□□□□ -2.19
NPIPA3F8WFD2 Y_RNA.252-201ENST00000364556 101 ntBASIC1.38□□□□□ -2.19
NPIPA3F8WFD2 Y_RNA.419-201ENST00000384041 102 ntBASIC1.38□□□□□ -2.19
NPIPA3F8WFD2 RNU6-321P-201ENST00000410912 106 ntBASIC1.38□□□□□ -2.19
NPIPA3F8WFD2 SUMO1P2-201ENST00000452524 304 ntBASIC1.38□□□□□ -2.19
NPIPA3F8WFD2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.38□□□□□ -2.19
NPIPA3F8WFD2 AC005840.1-201ENST00000498412 377 ntBASIC1.38□□□□□ -2.19
NPIPA3F8WFD2 RNU4-77P-201ENST00000516692 156 ntBASIC1.38□□□□□ -2.19
NPIPA3F8WFD2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.38□□□□□ -2.19
NPIPA3F8WFD2 MIR5188-201ENST00000583467 113 ntBASIC1.38□□□□□ -2.19
NPIPA3F8WFD2 AL117336.2-201ENST00000602435 335 ntBASIC1.38□□□□□ -2.19
NPIPA3F8WFD2 AL359821.1-201ENST00000605519 182 ntBASIC1.38□□□□□ -2.19
NPIPA3F8WFD2 AL133255.1-201ENST00000606374 441 ntBASIC1.38□□□□□ -2.19
NPIPA3F8WFD2 AC006157.1-201ENST00000611750 366 ntBASIC1.38□□□□□ -2.19
NPIPA3F8WFD2 AC040896.1-201ENST00000613819 479 ntBASIC1.38□□□□□ -2.19
NPIPA3F8WFD2 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.38□□□□□ -2.19
NPIPA3F8WFD2 AL008636.1-201ENST00000625038 1018 ntBASIC1.38□□□□□ -2.19
NPIPA3F8WFD2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
NPIPA3F8WFD2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 MIR337-201ENST00000362281 93 ntBASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 RNU6-1123P-201ENST00000362347 106 ntBASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 Y_RNA.197-201ENST00000364004 102 ntBASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 Y_RNA.265-201ENST00000364677 108 ntBASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 RNU2-54P-201ENST00000410299 190 ntBASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 AC022028.1-201ENST00000412054 408 ntBASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 AL160004.2-201ENST00000432935 350 ntBASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 AC092473.1-201ENST00000441098 221 ntBASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 AC233266.1-201ENST00000454518 96 ntBASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 RNA5SP445-201ENST00000515889 115 ntBASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 RNU6-155P-201ENST00000516347 100 ntBASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 RNU6-1291P-201ENST00000516591 104 ntBASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 RNU2-56P-201ENST00000516826 190 ntBASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 SNORA31.24-201ENST00000517232 57 ntBASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 AC242852.1-201ENST00000612151 96 ntBASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 AC244015.1-201ENST00000622301 99 ntBASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 AL606534.2-204ENST00000635008 178 ntBASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
NPIPA3F8WFD2 SNORD33-201ENST00000362761 85 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 RNU6-117P-201ENST00000365415 107 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 Y_RNA.446-201ENST00000384178 104 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 RNU6-505P-201ENST00000384427 107 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 SNORA12.1-201ENST00000390873 148 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 AL031003.1-201ENST00000404229 172 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 MIR1304-201ENST00000408243 91 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 RNA5SP247-201ENST00000411181 105 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 SDAD1P3-201ENST00000427380 333 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 MTND1P14-201ENST00000427400 950 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 AL135790.2-201ENST00000437701 267 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 AC027119.1-201ENST00000440877 241 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 PGBD4P5-201ENST00000445958 426 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 RNU6-1170P-201ENST00000515974 106 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 RNU6-341P-201ENST00000516973 96 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 RNU6-902P-201ENST00000517212 91 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 AC091178.2-201ENST00000584401 117 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 ZNF209P-201ENST00000593450 2304 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 RPS29P30-201ENST00000600975 111 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 AL162424.1-201ENST00000602325 221 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 AL080274.1-201ENST00000605565 220 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 SNORD58B-201ENST00000607313 66 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 AL365434.2-201ENST00000607979 234 ntBASIC1.36□□□□□ -2.19
NPIPA3F8WFD2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
NPIPA3F8WFD2 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
NPIPA3F8WFD2 AL391987.6-201ENST00000305671 199 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms