Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AL356776.1-201ENST00000406574 447 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 HSPE1P13-201ENST00000451143 297 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 snoU13.9-201ENST00000458927 103 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 RNU6-329P-201ENST00000459618 107 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 SNORA40.9-201ENST00000515895 93 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 RNU6-256P-201ENST00000516747 97 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 AL358944.1-201ENST00000528537 144 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 AL590705.4-201ENST00000532209 134 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 AC068790.6-201ENST00000602558 258 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 AC080078.2-201ENST00000603766 501 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 Y_RNA.146-201ENST00000363549 102 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 RNU6-595P-201ENST00000363944 107 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 RNU6-483P-201ENST00000384088 108 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 SNORA12.1-201ENST00000390873 148 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 MRPL42P3-201ENST00000401492 326 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 MIR548F5-201ENST00000408421 86 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 RNA5SP25-201ENST00000410815 110 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 SNX2P2-201ENST00000424553 323 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 RPS29P25-201ENST00000481709 171 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 SNORA40.12-201ENST00000516329 111 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 RNA5SP481-201ENST00000516814 122 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 AF235103.2-201ENST00000525753 346 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 AL929325.1-201ENST00000603096 117 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 AC005828.6-201ENST00000606610 232 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 AC106800.4-201ENST00000614905 153 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 AC027335.2-201ENST00000624030 375 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 Y_RNA.9-201ENST00000362354 101 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 SNORD87-201ENST00000364849 89 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 Y_RNA.361-201ENST00000365515 120 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 RNA5SP259-201ENST00000365541 109 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 RNU6-1145P-201ENST00000384246 107 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 RNU6-601P-201ENST00000384540 107 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 Y_RNA.530-201ENST00000384587 101 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 MIR19B1-201ENST00000384829 87 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 MTCYBP10-201ENST00000424905 650 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 AC010154.1-201ENST00000425857 269 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 AC004386.2-201ENST00000441858 148 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 AC093850.1-201ENST00000454121 251 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 AC091951.2-201ENST00000500762 203 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 AC018710.1-201ENST00000506509 158 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 AC025465.3-201ENST00000510570 311 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 RN7SKP88-201ENST00000516847 250 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 AP002004.2-201ENST00000531656 154 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 AC090049.2-201ENST00000550377 109 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 7SK.8-201ENST00000612110 250 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 AC021506.2-201ENST00000612354 169 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 7SK.11-201ENST00000615477 250 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 Pinc.1-201ENST00000616452 154 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 7SK.13-201ENST00000622040 250 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 TPTEP1-208ENST00000636884 213 ntBASIC0.44□□□□□ -2.34
COL6A6A6NMZ7 Y_RNA.27-201ENST00000362540 103 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 Y_RNA.414-201ENST00000384011 101 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 RNU6-793P-201ENST00000384233 104 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 Y_RNA.559-201ENST00000384686 107 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 USP9YP30-201ENST00000430729 455 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 AL353997.1-201ENST00000432936 108 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 AC027119.1-201ENST00000440877 241 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 RNU6-436P-201ENST00000516171 114 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 RNU7-99P-201ENST00000516271 62 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 AC109810.1-201ENST00000534066 224 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 AL132765.2-201ENST00000610812 351 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 AC090517.2-201ENST00000614966 680 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 AC012676.2-201ENST00000619258 186 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 AL513423.1-201ENST00000621695 132 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 AC100810.6-201ENST00000638068 285 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 RNY4P3-201ENST00000365254 95 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 Y_RNA.446-201ENST00000384178 104 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 RNU6-939P-201ENST00000384634 107 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 SNORD116-4-201ENST00000384733 96 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 MIR329-1-201ENST00000385028 80 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 MIR660-201ENST00000385235 97 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 SNORA69.1-201ENST00000390904 137 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 TRBVB-201ENST00000477100 408 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 AC069439.1-201ENST00000494739 167 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 OR9P1P-201ENST00000496431 281 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 RNU6-470P-201ENST00000515954 104 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 RNU6-718P-201ENST00000516166 105 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 RNU7-40P-201ENST00000516397 64 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 AC025647.1-201ENST00000517879 253 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 AC134698.4-201ENST00000523451 826 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 MIR4514-201ENST00000581410 57 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 MIR3942-201ENST00000585264 109 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 AC005972.2-201ENST00000604690 348 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 SNORD11B-201ENST00000607707 90 ntBASIC0.43□□□□□ -2.34
COL6A6A6NMZ7 MIR424-201ENST00000362227 98 ntBASIC0.42□□□□□ -2.34
COL6A6A6NMZ7 Y_RNA.48-201ENST00000362710 103 ntBASIC0.42□□□□□ -2.34
COL6A6A6NMZ7 RNU6-961P-201ENST00000363893 105 ntBASIC0.42□□□□□ -2.34
COL6A6A6NMZ7 Y_RNA.212-201ENST00000364177 102 ntBASIC0.42□□□□□ -2.34
COL6A6A6NMZ7 Y_RNA.557-201ENST00000384680 107 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms