Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-1.64□□□□□ -2.67
HFM1A2PYH4 AL359999.1-201ENST00000604513 294 ntBASIC-1.64□□□□□ -2.67
HFM1A2PYH4 MIR1264-201ENST00000616374 69 ntBASIC-1.64□□□□□ -2.67
HFM1A2PYH4 AC231657.1-201ENST00000624313 397 ntBASIC-1.64□□□□□ -2.67
HFM1A2PYH4 RNU6-289P-201ENST00000364093 107 ntBASIC-1.65□□□□□ -2.67
HFM1A2PYH4 SNORD28B-201ENST00000390993 75 ntBASIC-1.65□□□□□ -2.67
HFM1A2PYH4 MIR1257-201ENST00000408490 117 ntBASIC-1.65□□□□□ -2.67
HFM1A2PYH4 MTCO3P8-201ENST00000453691 755 ntBASIC-1.65□□□□□ -2.67
HFM1A2PYH4 SNORA18.4-201ENST00000516440 124 ntBASIC-1.65□□□□□ -2.67
HFM1A2PYH4 AGGF1P4-201ENST00000568249 801 ntBASIC-1.65□□□□□ -2.67
HFM1A2PYH4 MIR4306-201ENST00000583390 91 ntBASIC-1.65□□□□□ -2.67
HFM1A2PYH4 uc_338.4-201ENST00000616635 176 ntBASIC-1.65□□□□□ -2.67
HFM1A2PYH4 RNU6-371P-201ENST00000364283 108 ntBASIC-1.66□□□□□ -2.67
HFM1A2PYH4 SNORD115-48-201ENST00000364764 76 ntBASIC-1.66□□□□□ -2.67
HFM1A2PYH4 RNU6-1122P-201ENST00000384449 107 ntBASIC-1.66□□□□□ -2.67
HFM1A2PYH4 MIR570-201ENST00000384917 97 ntBASIC-1.66□□□□□ -2.67
HFM1A2PYH4 MTND2P6-201ENST00000455337 1030 ntBASIC-1.66□□□□□ -2.67
HFM1A2PYH4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-1.66□□□□□ -2.67
HFM1A2PYH4 AC097462.1-201ENST00000514125 324 ntBASIC-1.66□□□□□ -2.67
HFM1A2PYH4 RNA5SP461-201ENST00000516451 104 ntBASIC-1.66□□□□□ -2.67
HFM1A2PYH4 AC023632.1-201ENST00000518463 375 ntBASIC-1.66□□□□□ -2.67
HFM1A2PYH4 AL157687.1-201ENST00000554853 619 ntBASIC-1.66□□□□□ -2.67
HFM1A2PYH4 MIR4280-201ENST00000582178 76 ntBASIC-1.66□□□□□ -2.67
HFM1A2PYH4 AC012467.1-201ENST00000607740 256 ntBASIC-1.66□□□□□ -2.67
HFM1A2PYH4 AL078596.1-201ENST00000624856 447 ntBASIC-1.66□□□□□ -2.67
HFM1A2PYH4 AC010332.2-201ENST00000613083 1904 ntBASIC-1.66□□□□□ -2.68
HFM1A2PYH4 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.66□□□□□ -2.68
HFM1A2PYH4 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.66□□□□□ -2.68
HFM1A2PYH4 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.66□□□□□ -2.68
HFM1A2PYH4 RNU6-549P-201ENST00000384433 107 ntBASIC-1.66□□□□□ -2.68
HFM1A2PYH4 MIR15B-201ENST00000385045 98 ntBASIC-1.66□□□□□ -2.68
HFM1A2PYH4 RPL23AP30-201ENST00000432419 501 ntBASIC-1.66□□□□□ -2.68
HFM1A2PYH4 SLC2A13P1-201ENST00000531560 322 ntBASIC-1.66□□□□□ -2.68
HFM1A2PYH4 AC069431.2-201ENST00000604149 1099 ntBASIC-1.66□□□□□ -2.68
HFM1A2PYH4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-1.66□□□□□ -2.68
HFM1A2PYH4 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-1.66□□□□□ -2.68
HFM1A2PYH4 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.67□□□□□ -2.68
HFM1A2PYH4 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.67□□□□□ -2.68
HFM1A2PYH4 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.67□□□□□ -2.68
HFM1A2PYH4 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.67□□□□□ -2.68
HFM1A2PYH4 RNU6-190P-201ENST00000384154 102 ntBASIC-1.67□□□□□ -2.68
HFM1A2PYH4 AL590002.1-201ENST00000406554 418 ntBASIC-1.67□□□□□ -2.68
HFM1A2PYH4 RNU2-42P-201ENST00000410697 113 ntBASIC-1.67□□□□□ -2.68
HFM1A2PYH4 USP9YP21-201ENST00000420603 432 ntBASIC-1.67□□□□□ -2.68
HFM1A2PYH4 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.67□□□□□ -2.68
HFM1A2PYH4 AC022306.2-201ENST00000617563 647 ntBASIC-1.67□□□□□ -2.68
HFM1A2PYH4 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.68□□□□□ -2.68
HFM1A2PYH4 SNORA1-201ENST00000384107 130 ntBASIC-1.68□□□□□ -2.68
HFM1A2PYH4 MIR516B1-201ENST00000385211 90 ntBASIC-1.68□□□□□ -2.68
HFM1A2PYH4 RNU6-721P-201ENST00000410155 105 ntBASIC-1.68□□□□□ -2.68
HFM1A2PYH4 AL031779.1-201ENST00000415663 330 ntBASIC-1.68□□□□□ -2.68
HFM1A2PYH4 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-1.68□□□□□ -2.68
HFM1A2PYH4 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.68□□□□□ -2.68
HFM1A2PYH4 AC026414.1-201ENST00000504046 698 ntBASIC-1.68□□□□□ -2.68
HFM1A2PYH4 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.68□□□□□ -2.68
HFM1A2PYH4 AC068587.4-201ENST00000533893 186 ntBASIC-1.68□□□□□ -2.68
HFM1A2PYH4 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.69□□□□□ -2.68
HFM1A2PYH4 SNRPGP10-201ENST00000432323 225 ntBASIC-1.69□□□□□ -2.68
HFM1A2PYH4 AL445193.1-201ENST00000441183 141 ntBASIC-1.69□□□□□ -2.68
HFM1A2PYH4 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-1.69□□□□□ -2.68
HFM1A2PYH4 RNA5SP216-201ENST00000516111 123 ntBASIC-1.69□□□□□ -2.68
HFM1A2PYH4 AP000907.4-201ENST00000604143 237 ntBASIC-1.69□□□□□ -2.68
HFM1A2PYH4 AC108747.1-201ENST00000609508 535 ntBASIC-1.69□□□□□ -2.68
HFM1A2PYH4 AC078880.5-201ENST00000617845 421 ntBASIC-1.69□□□□□ -2.68
HFM1A2PYH4 RNU6-336P-201ENST00000364891 107 ntBASIC-1.7□□□□□ -2.68
HFM1A2PYH4 RNU6-455P-201ENST00000384681 107 ntBASIC-1.7□□□□□ -2.68
HFM1A2PYH4 MTND4P24-201ENST00000424002 397 ntBASIC-1.7□□□□□ -2.68
HFM1A2PYH4 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.7□□□□□ -2.68
HFM1A2PYH4 RNA5SP454-201ENST00000517231 127 ntBASIC-1.7□□□□□ -2.68
HFM1A2PYH4 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.7□□□□□ -2.68
HFM1A2PYH4 AC026470.2-201ENST00000561492 181 ntBASIC-1.7□□□□□ -2.68
HFM1A2PYH4 MTND1P7-201ENST00000632801 297 ntBASIC-1.7□□□□□ -2.68
HFM1A2PYH4 RNU5E-6P-201ENST00000365574 115 ntBASIC-1.71□□□□□ -2.68
HFM1A2PYH4 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.71□□□□□ -2.68
HFM1A2PYH4 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.71□□□□□ -2.68
HFM1A2PYH4 AC092447.3-201ENST00000426027 686 ntBASIC-1.71□□□□□ -2.68
HFM1A2PYH4 AL358934.1-201ENST00000432346 324 ntBASIC-1.71□□□□□ -2.68
HFM1A2PYH4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.71□□□□□ -2.68
HFM1A2PYH4 RNU6-475P-201ENST00000516073 104 ntBASIC-1.71□□□□□ -2.68
HFM1A2PYH4 RNU6-150P-201ENST00000516237 95 ntBASIC-1.71□□□□□ -2.68
HFM1A2PYH4 AC140658.3-201ENST00000567603 271 ntBASIC-1.71□□□□□ -2.68
HFM1A2PYH4 SNORD68-201ENST00000363214 84 ntBASIC-1.72□□□□□ -2.68
HFM1A2PYH4 RNU6-726P-201ENST00000364680 107 ntBASIC-1.72□□□□□ -2.68
HFM1A2PYH4 AL138752.1-201ENST00000452964 351 ntBASIC-1.72□□□□□ -2.68
HFM1A2PYH4 RNU7-182P-201ENST00000459009 62 ntBASIC-1.72□□□□□ -2.68
HFM1A2PYH4 SNORD65B-201ENST00000459126 73 ntBASIC-1.72□□□□□ -2.68
HFM1A2PYH4 RNU6-706P-201ENST00000517229 104 ntBASIC-1.72□□□□□ -2.68
HFM1A2PYH4 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-1.72□□□□□ -2.68
HFM1A2PYH4 MTND4P33-201ENST00000556706 766 ntBASIC-1.72□□□□□ -2.68
HFM1A2PYH4 Z94722.1-201ENST00000604328 474 ntBASIC-1.72□□□□□ -2.68
HFM1A2PYH4 MIR7844-201ENST00000616161 122 ntBASIC-1.72□□□□□ -2.68
HFM1A2PYH4 AC107905.1-201ENST00000616204 426 ntBASIC-1.72□□□□□ -2.68
HFM1A2PYH4 MIR8066-201ENST00000617280 78 ntBASIC-1.72□□□□□ -2.68
HFM1A2PYH4 MIR6740-201ENST00000618268 113 ntBASIC-1.72□□□□□ -2.68
HFM1A2PYH4 AL157770.1-201ENST00000623049 439 ntBASIC-1.72□□□□□ -2.68
HFM1A2PYH4 AC010608.3-201ENST00000625048 527 ntBASIC-1.72□□□□□ -2.68
HFM1A2PYH4 SNORA43.4-201ENST00000629559 138 ntBASIC-1.72□□□□□ -2.68
HFM1A2PYH4 ZNF299P-201ENST00000406845 1804 ntBASIC-1.73□□□□□ -2.69
HFM1A2PYH4 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.73□□□□□ -2.69
HFM1A2PYH4 RNU6-960P-201ENST00000364056 120 ntBASIC-1.73□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms