Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.19□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AL390729.2-201ENST00000416137 156 ntBASIC-0.19□□□□□ -2.44
TCRBV4S1A1TA0A5B7 MTCO2P16-201ENST00000436962 677 ntBASIC-0.19□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-0.19□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AC073415.1-201ENST00000449240 153 ntBASIC-0.19□□□□□ -2.44
TCRBV4S1A1TA0A5B7 MTCO1P29-201ENST00000496868 288 ntBASIC-0.19□□□□□ -2.44
TCRBV4S1A1TA0A5B7 RNU6-107P-201ENST00000516643 102 ntBASIC-0.19□□□□□ -2.44
TCRBV4S1A1TA0A5B7 MTND2P38-201ENST00000522536 667 ntBASIC-0.19□□□□□ -2.44
TCRBV4S1A1TA0A5B7 MTND1P8-201ENST00000571424 950 ntBASIC-0.19□□□□□ -2.44
TCRBV4S1A1TA0A5B7 MIR4762-201ENST00000585261 75 ntBASIC-0.19□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AC011458.1-201ENST00000604034 617 ntBASIC-0.19□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AC008536.2-201ENST00000607284 349 ntBASIC-0.19□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AF250324.2-201ENST00000608299 610 ntBASIC-0.19□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AL591926.4-201ENST00000616895 298 ntBASIC-0.19□□□□□ -2.44
TCRBV4S1A1TA0A5B7 RNU6-580P-201ENST00000365159 107 ntBASIC-0.2□□□□□ -2.44
TCRBV4S1A1TA0A5B7 RNY3P9-201ENST00000384727 106 ntBASIC-0.2□□□□□ -2.44
TCRBV4S1A1TA0A5B7 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-0.2□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AL590632.1-201ENST00000424289 371 ntBASIC-0.2□□□□□ -2.44
TCRBV4S1A1TA0A5B7 MTND2P14-201ENST00000482139 351 ntBASIC-0.2□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.2□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.2□□□□□ -2.44
TCRBV4S1A1TA0A5B7 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-0.2□□□□□ -2.44
TCRBV4S1A1TA0A5B7 RNU6-311P-201ENST00000516224 102 ntBASIC-0.2□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AC141557.1-201ENST00000540982 400 ntBASIC-0.2□□□□□ -2.44
TCRBV4S1A1TA0A5B7 MIR4771-2-201ENST00000577758 74 ntBASIC-0.2□□□□□ -2.44
TCRBV4S1A1TA0A5B7 MIR3678-201ENST00000578455 94 ntBASIC-0.2□□□□□ -2.44
TCRBV4S1A1TA0A5B7 MIR4771-1-201ENST00000582617 74 ntBASIC-0.2□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AL357078.3-201ENST00000607528 618 ntBASIC-0.2□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AL121757.2-201ENST00000611223 313 ntBASIC-0.2□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AC006504.8-201ENST00000621046 635 ntBASIC-0.2□□□□□ -2.44
TCRBV4S1A1TA0A5B7 uc_338.16-201ENST00000621804 95 ntBASIC-0.2□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AC127459.3-201ENST00000624328 466 ntBASIC-0.2□□□□□ -2.44
TCRBV4S1A1TA0A5B7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.2□□□□□ -2.44
TCRBV4S1A1TA0A5B7 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.2□□□□□ -2.44
TCRBV4S1A1TA0A5B7 MIR377-201ENST00000362145 69 ntBASIC-0.21□□□□□ -2.44
TCRBV4S1A1TA0A5B7 RNU6-1214P-201ENST00000363650 109 ntBASIC-0.21□□□□□ -2.44
TCRBV4S1A1TA0A5B7 RNU6-280P-201ENST00000364145 104 ntBASIC-0.21□□□□□ -2.44
TCRBV4S1A1TA0A5B7 SNORA32.1-201ENST00000364514 115 ntBASIC-0.21□□□□□ -2.44
TCRBV4S1A1TA0A5B7 RNU6-934P-201ENST00000365154 107 ntBASIC-0.21□□□□□ -2.44
TCRBV4S1A1TA0A5B7 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.21□□□□□ -2.44
TCRBV4S1A1TA0A5B7 RNU6-933P-201ENST00000384424 107 ntBASIC-0.21□□□□□ -2.44
TCRBV4S1A1TA0A5B7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
TCRBV4S1A1TA0A5B7 SNORD100-201ENST00000408573 76 ntBASIC-0.21□□□□□ -2.44
TCRBV4S1A1TA0A5B7 RNU6-248P-201ENST00000410720 107 ntBASIC-0.21□□□□□ -2.44
TCRBV4S1A1TA0A5B7 RPL30P16-201ENST00000419341 429 ntBASIC-0.21□□□□□ -2.44
TCRBV4S1A1TA0A5B7 MTND1P26-201ENST00000440488 538 ntBASIC-0.21□□□□□ -2.44
TCRBV4S1A1TA0A5B7 TPTE2P5-203ENST00000458118 728 ntBASIC-0.21□□□□□ -2.44
TCRBV4S1A1TA0A5B7 RPL30P10-201ENST00000488148 337 ntBASIC-0.21□□□□□ -2.44
TCRBV4S1A1TA0A5B7 MRPS36P3-201ENST00000519284 130 ntBASIC-0.21□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AL355375.2-201ENST00000574825 175 ntBASIC-0.21□□□□□ -2.44
TCRBV4S1A1TA0A5B7 PIGPP4-201ENST00000584447 307 ntBASIC-0.21□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AL133215.3-201ENST00000609801 448 ntBASIC-0.21□□□□□ -2.44
TCRBV4S1A1TA0A5B7 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.21□□□□□ -2.44
TCRBV4S1A1TA0A5B7 RNU6-1120P-201ENST00000362988 108 ntBASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 RNU6-996P-201ENST00000365438 107 ntBASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 RNU6-136P-201ENST00000384663 107 ntBASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 SNORD28B-201ENST00000390993 75 ntBASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AL606923.1-201ENST00000406616 190 ntBASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 MTATP6P18-201ENST00000417994 673 ntBASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 PDCL2P1-201ENST00000419302 352 ntBASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 RNU7-56P-201ENST00000458744 62 ntBASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 SNORD42A-201ENST00000459584 64 ntBASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 MTCO3P38-201ENST00000468910 766 ntBASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 RNU6-63P-201ENST00000516690 95 ntBASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AL118558.2-201ENST00000556294 238 ntBASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 MIR4676-201ENST00000583078 72 ntBASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AC092747.3-201ENST00000603769 301 ntBASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AC020891.4-201ENST00000605745 93 ntBASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AC090517.2-201ENST00000614966 680 ntBASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AL158063.1-201ENST00000615349 536 ntBASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 AC022306.3-201ENST00000619930 550 ntBASIC-0.22□□□□□ -2.44
TCRBV4S1A1TA0A5B7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.22□□□□□ -2.45
TCRBV4S1A1TA0A5B7 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.23□□□□□ -2.45
TCRBV4S1A1TA0A5B7 RNU6-923P-201ENST00000364753 107 ntBASIC-0.23□□□□□ -2.45
TCRBV4S1A1TA0A5B7 RNU6-396P-201ENST00000365369 105 ntBASIC-0.23□□□□□ -2.45
TCRBV4S1A1TA0A5B7 RNU6-514P-201ENST00000384208 107 ntBASIC-0.23□□□□□ -2.45
TCRBV4S1A1TA0A5B7 RNU6-541P-201ENST00000384709 110 ntBASIC-0.23□□□□□ -2.45
TCRBV4S1A1TA0A5B7 MIR620-201ENST00000385232 95 ntBASIC-0.23□□□□□ -2.45
TCRBV4S1A1TA0A5B7 MTCYBP4-201ENST00000401524 249 ntBASIC-0.23□□□□□ -2.45
TCRBV4S1A1TA0A5B7 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.23□□□□□ -2.45
TCRBV4S1A1TA0A5B7 RNU7-63P-201ENST00000459054 62 ntBASIC-0.23□□□□□ -2.45
TCRBV4S1A1TA0A5B7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.23□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.23□□□□□ -2.45
TCRBV4S1A1TA0A5B7 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.23□□□□□ -2.45
TCRBV4S1A1TA0A5B7 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.23□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.23□□□□□ -2.45
TCRBV4S1A1TA0A5B7 MIR3684-201ENST00000579779 74 ntBASIC-0.23□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AL357075.2-201ENST00000614906 189 ntBASIC-0.23□□□□□ -2.45
TCRBV4S1A1TA0A5B7 SNORA9.1-201ENST00000362412 131 ntBASIC-0.24□□□□□ -2.45
TCRBV4S1A1TA0A5B7 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.24□□□□□ -2.45
TCRBV4S1A1TA0A5B7 RNU6-82P-201ENST00000363970 107 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms