Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AC243428.1-201ENST00000421099 264 ntBASIC-0.06□□□□□ -2.42
TRAV1-1A0A0B4J248 AC073261.1-201ENST00000429409 121 ntBASIC-0.06□□□□□ -2.42
TRAV1-1A0A0B4J248 MRPS10P2-201ENST00000431226 381 ntBASIC-0.06□□□□□ -2.42
TRAV1-1A0A0B4J248 AC018710.1-201ENST00000506509 158 ntBASIC-0.06□□□□□ -2.42
TRAV1-1A0A0B4J248 SNORA25.12-201ENST00000516202 82 ntBASIC-0.06□□□□□ -2.42
TRAV1-1A0A0B4J248 AL118558.2-201ENST00000556294 238 ntBASIC-0.06□□□□□ -2.42
TRAV1-1A0A0B4J248 UBL5P4-201ENST00000562584 236 ntBASIC-0.06□□□□□ -2.42
TRAV1-1A0A0B4J248 AC012433.1-201ENST00000588916 398 ntBASIC-0.06□□□□□ -2.42
TRAV1-1A0A0B4J248 AL136370.1-201ENST00000608166 691 ntBASIC-0.06□□□□□ -2.42
TRAV1-1A0A0B4J248 AL121757.2-201ENST00000611223 313 ntBASIC-0.06□□□□□ -2.42
TRAV1-1A0A0B4J248 AC079248.2-201ENST00000623779 326 ntBASIC-0.06□□□□□ -2.42
TRAV1-1A0A0B4J248 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.06□□□□□ -2.42
TRAV1-1A0A0B4J248 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
TRAV1-1A0A0B4J248 FGF7P2-201ENST00000332473 296 ntBASIC-0.07□□□□□ -2.42
TRAV1-1A0A0B4J248 SNORD118-201ENST00000363593 134 ntBASIC-0.07□□□□□ -2.42
TRAV1-1A0A0B4J248 RNU6-553P-201ENST00000364047 96 ntBASIC-0.07□□□□□ -2.42
TRAV1-1A0A0B4J248 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.07□□□□□ -2.42
TRAV1-1A0A0B4J248 RNU6-584P-201ENST00000410350 95 ntBASIC-0.07□□□□□ -2.42
TRAV1-1A0A0B4J248 AL031667.1-201ENST00000440222 725 ntBASIC-0.07□□□□□ -2.42
TRAV1-1A0A0B4J248 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.07□□□□□ -2.42
TRAV1-1A0A0B4J248 SNORA18.7-201ENST00000516910 131 ntBASIC-0.07□□□□□ -2.42
TRAV1-1A0A0B4J248 MTND2P38-201ENST00000522536 667 ntBASIC-0.07□□□□□ -2.42
TRAV1-1A0A0B4J248 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.07□□□□□ -2.42
TRAV1-1A0A0B4J248 MIR4290-201ENST00000583807 95 ntBASIC-0.07□□□□□ -2.42
TRAV1-1A0A0B4J248 AC092747.3-201ENST00000603769 301 ntBASIC-0.07□□□□□ -2.42
TRAV1-1A0A0B4J248 AC005828.6-201ENST00000606610 232 ntBASIC-0.07□□□□□ -2.42
TRAV1-1A0A0B4J248 AL355073.2-201ENST00000612106 557 ntBASIC-0.07□□□□□ -2.42
TRAV1-1A0A0B4J248 FAM157A-202ENST00000615155 405 ntBASIC-0.07□□□□□ -2.42
TRAV1-1A0A0B4J248 AC127459.3-201ENST00000624328 466 ntBASIC-0.07□□□□□ -2.42
TRAV1-1A0A0B4J248 SNORD114-5-201ENST00000362928 70 ntBASIC-0.08□□□□□ -2.42
TRAV1-1A0A0B4J248 RNU6-302P-201ENST00000365249 107 ntBASIC-0.08□□□□□ -2.42
TRAV1-1A0A0B4J248 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.08□□□□□ -2.42
TRAV1-1A0A0B4J248 RNU6-38P-201ENST00000384085 107 ntBASIC-0.08□□□□□ -2.42
TRAV1-1A0A0B4J248 RNU5A-2P-201ENST00000384337 116 ntBASIC-0.08□□□□□ -2.42
TRAV1-1A0A0B4J248 RNU6-933P-201ENST00000384424 107 ntBASIC-0.08□□□□□ -2.42
TRAV1-1A0A0B4J248 AL353997.1-201ENST00000432936 108 ntBASIC-0.08□□□□□ -2.42
TRAV1-1A0A0B4J248 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.08□□□□□ -2.42
TRAV1-1A0A0B4J248 SNORD123-201ENST00000459473 70 ntBASIC-0.08□□□□□ -2.42
TRAV1-1A0A0B4J248 RPL30P10-201ENST00000488148 337 ntBASIC-0.08□□□□□ -2.42
TRAV1-1A0A0B4J248 MIR2115-201ENST00000516657 100 ntBASIC-0.08□□□□□ -2.42
TRAV1-1A0A0B4J248 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.08□□□□□ -2.42
TRAV1-1A0A0B4J248 AL355375.2-201ENST00000574825 175 ntBASIC-0.08□□□□□ -2.42
TRAV1-1A0A0B4J248 MIR3913-1-201ENST00000577744 102 ntBASIC-0.08□□□□□ -2.42
TRAV1-1A0A0B4J248 AF250324.2-201ENST00000608299 610 ntBASIC-0.08□□□□□ -2.42
TRAV1-1A0A0B4J248 AL354950.2-201ENST00000617939 290 ntBASIC-0.08□□□□□ -2.42
TRAV1-1A0A0B4J248 AC072046.2-201ENST00000618366 268 ntBASIC-0.08□□□□□ -2.42
TRAV1-1A0A0B4J248 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.08□□□□□ -2.42
TRAV1-1A0A0B4J248 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.08□□□□□ -2.42
TRAV1-1A0A0B4J248 SNORD114-7-201ENST00000362520 77 ntBASIC-0.09□□□□□ -2.42
TRAV1-1A0A0B4J248 RNA5SP214-201ENST00000363378 118 ntBASIC-0.09□□□□□ -2.42
TRAV1-1A0A0B4J248 RNU6-407P-201ENST00000365280 104 ntBASIC-0.09□□□□□ -2.42
TRAV1-1A0A0B4J248 RNU6-1103P-201ENST00000384150 107 ntBASIC-0.09□□□□□ -2.42
TRAV1-1A0A0B4J248 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.09□□□□□ -2.42
TRAV1-1A0A0B4J248 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.09□□□□□ -2.42
TRAV1-1A0A0B4J248 MTND2P18-201ENST00000419962 1030 ntBASIC-0.09□□□□□ -2.42
TRAV1-1A0A0B4J248 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.09□□□□□ -2.42
TRAV1-1A0A0B4J248 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.09□□□□□ -2.42
TRAV1-1A0A0B4J248 AL590632.1-201ENST00000424289 371 ntBASIC-0.09□□□□□ -2.42
TRAV1-1A0A0B4J248 AL353572.1-201ENST00000442490 417 ntBASIC-0.09□□□□□ -2.42
TRAV1-1A0A0B4J248 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.09□□□□□ -2.42
TRAV1-1A0A0B4J248 MTCO2P30-201ENST00000503662 364 ntBASIC-0.09□□□□□ -2.42
TRAV1-1A0A0B4J248 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.09□□□□□ -2.42
TRAV1-1A0A0B4J248 SNORA19.2-201ENST00000516013 114 ntBASIC-0.09□□□□□ -2.42
TRAV1-1A0A0B4J248 RNA5SP227-201ENST00000516184 113 ntBASIC-0.09□□□□□ -2.42
TRAV1-1A0A0B4J248 RNU6-232P-201ENST00000517144 64 ntBASIC-0.09□□□□□ -2.42
TRAV1-1A0A0B4J248 AC093027.1-201ENST00000546698 429 ntBASIC-0.09□□□□□ -2.42
TRAV1-1A0A0B4J248 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.09□□□□□ -2.42
TRAV1-1A0A0B4J248 AC073534.2-201ENST00000620377 381 ntBASIC-0.09□□□□□ -2.42
TRAV1-1A0A0B4J248 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.09□□□□□ -2.42
TRAV1-1A0A0B4J248 MIR4251-201ENST00000635819 61 ntBASIC-0.09□□□□□ -2.42
TRAV1-1A0A0B4J248 SNORD68-201ENST00000363214 84 ntBASIC-0.1□□□□□ -2.43
TRAV1-1A0A0B4J248 RNU6V-201ENST00000384105 107 ntBASIC-0.1□□□□□ -2.43
TRAV1-1A0A0B4J248 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.1□□□□□ -2.43
TRAV1-1A0A0B4J248 RNU6-281P-201ENST00000384212 103 ntBASIC-0.1□□□□□ -2.43
TRAV1-1A0A0B4J248 RNU6-925P-201ENST00000384629 104 ntBASIC-0.1□□□□□ -2.43
TRAV1-1A0A0B4J248 RNU6-541P-201ENST00000384709 110 ntBASIC-0.1□□□□□ -2.43
TRAV1-1A0A0B4J248 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
TRAV1-1A0A0B4J248 MIR873-201ENST00000401120 77 ntBASIC-0.1□□□□□ -2.43
TRAV1-1A0A0B4J248 AL139396.1-201ENST00000421137 167 ntBASIC-0.1□□□□□ -2.43
TRAV1-1A0A0B4J248 RPL23AP54-201ENST00000495129 419 ntBASIC-0.1□□□□□ -2.43
TRAV1-1A0A0B4J248 AC046134.1-201ENST00000514454 666 ntBASIC-0.1□□□□□ -2.43
TRAV1-1A0A0B4J248 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.1□□□□□ -2.43
TRAV1-1A0A0B4J248 RNA5SP285-201ENST00000516619 119 ntBASIC-0.1□□□□□ -2.43
TRAV1-1A0A0B4J248 MTCO2P4-201ENST00000517968 247 ntBASIC-0.1□□□□□ -2.43
TRAV1-1A0A0B4J248 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.1□□□□□ -2.43
TRAV1-1A0A0B4J248 MIR548AO-201ENST00000579992 96 ntBASIC-0.1□□□□□ -2.43
TRAV1-1A0A0B4J248 AC104408.1-201ENST00000605241 170 ntBASIC-0.1□□□□□ -2.43
TRAV1-1A0A0B4J248 AL591926.4-201ENST00000616895 298 ntBASIC-0.1□□□□□ -2.43
TRAV1-1A0A0B4J248 MIR377-201ENST00000362145 69 ntBASIC-0.11□□□□□ -2.43
TRAV1-1A0A0B4J248 MIR410-201ENST00000362222 80 ntBASIC-0.11□□□□□ -2.43
TRAV1-1A0A0B4J248 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.11□□□□□ -2.43
TRAV1-1A0A0B4J248 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.11□□□□□ -2.43
TRAV1-1A0A0B4J248 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.11□□□□□ -2.43
TRAV1-1A0A0B4J248 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.11□□□□□ -2.43
TRAV1-1A0A0B4J248 MIR329-2-201ENST00000385029 84 ntBASIC-0.11□□□□□ -2.43
TRAV1-1A0A0B4J248 SNORD71-201ENST00000411292 86 ntBASIC-0.11□□□□□ -2.43
TRAV1-1A0A0B4J248 ELOCP21-201ENST00000412558 336 ntBASIC-0.11□□□□□ -2.43
TRAV1-1A0A0B4J248 AL390729.2-201ENST00000416137 156 ntBASIC-0.11□□□□□ -2.43
TRAV1-1A0A0B4J248 RPL30P16-201ENST00000419341 429 ntBASIC-0.11□□□□□ -2.43
TRAV1-1A0A0B4J248 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms