Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 Y_RNA.64-201ENST00000362845 102 ntBASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 SNORA63D-201ENST00000364359 132 ntBASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 Y_RNA.286-201ENST00000364813 102 ntBASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 RNU6-806P-201ENST00000365147 105 ntBASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 RNU6-505P-201ENST00000384427 107 ntBASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 RNU6-296P-201ENST00000384608 107 ntBASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 MIR520A-201ENST00000384862 85 ntBASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 Y_RNA.581-201ENST00000391017 97 ntBASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 RNU11-5P-201ENST00000391216 129 ntBASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 AC244636.1-201ENST00000421152 228 ntBASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 RPS15AP28-201ENST00000435088 386 ntBASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 HSPE1P13-201ENST00000451143 297 ntBASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 Y_RNA.638-201ENST00000459374 113 ntBASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 AC098869.1-201ENST00000481627 292 ntBASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 AL117187.1-201ENST00000555482 181 ntBASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.85□□□□□ -2.11
LSM4Q9Y4Z0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
LSM4Q9Y4Z0 MIRLET7G-201ENST00000362280 84 ntBASIC1.84□□□□□ -2.11
LSM4Q9Y4Z0 RNU4-90P-201ENST00000362773 141 ntBASIC1.84□□□□□ -2.11
LSM4Q9Y4Z0 snoU2_19.2-201ENST00000363024 80 ntBASIC1.84□□□□□ -2.11
LSM4Q9Y4Z0 Y_RNA.383-201ENST00000383855 97 ntBASIC1.84□□□□□ -2.11
LSM4Q9Y4Z0 MIR548F4-201ENST00000408515 105 ntBASIC1.84□□□□□ -2.11
LSM4Q9Y4Z0 RNU6-710P-201ENST00000410424 105 ntBASIC1.84□□□□□ -2.11
LSM4Q9Y4Z0 Y_RNA.602-201ENST00000410535 92 ntBASIC1.84□□□□□ -2.11
LSM4Q9Y4Z0 AL356379.1-201ENST00000414105 126 ntBASIC1.84□□□□□ -2.11
LSM4Q9Y4Z0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.84□□□□□ -2.11
LSM4Q9Y4Z0 DYNLT3P2-201ENST00000442517 295 ntBASIC1.84□□□□□ -2.11
LSM4Q9Y4Z0 RPL23AP6-201ENST00000446637 472 ntBASIC1.84□□□□□ -2.11
LSM4Q9Y4Z0 HSPE1P25-201ENST00000455484 251 ntBASIC1.84□□□□□ -2.11
LSM4Q9Y4Z0 RNA5SP57-201ENST00000459463 123 ntBASIC1.84□□□□□ -2.11
LSM4Q9Y4Z0 MTATP8P1-201ENST00000467115 207 ntBASIC1.84□□□□□ -2.11
LSM4Q9Y4Z0 AC104435.1-201ENST00000483483 166 ntBASIC1.84□□□□□ -2.11
LSM4Q9Y4Z0 AC010409.1-201ENST00000487382 476 ntBASIC1.84□□□□□ -2.11
LSM4Q9Y4Z0 AP003733.2-201ENST00000529409 171 ntBASIC1.84□□□□□ -2.11
LSM4Q9Y4Z0 RPL21P9-201ENST00000556149 474 ntBASIC1.84□□□□□ -2.11
LSM4Q9Y4Z0 MIR6840-201ENST00000611937 71 ntBASIC1.84□□□□□ -2.11
LSM4Q9Y4Z0 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.84□□□□□ -2.11
LSM4Q9Y4Z0 Y_RNA.26-201ENST00000362539 101 ntBASIC1.83□□□□□ -2.12
LSM4Q9Y4Z0 RNU6-117P-201ENST00000365415 107 ntBASIC1.83□□□□□ -2.12
LSM4Q9Y4Z0 AL358176.2-201ENST00000425769 204 ntBASIC1.83□□□□□ -2.12
LSM4Q9Y4Z0 AC024067.1-201ENST00000426199 223 ntBASIC1.83□□□□□ -2.12
LSM4Q9Y4Z0 AL118496.2-201ENST00000448300 230 ntBASIC1.83□□□□□ -2.12
LSM4Q9Y4Z0 snoU13.23-201ENST00000458863 104 ntBASIC1.83□□□□□ -2.12
LSM4Q9Y4Z0 RNU7-94P-201ENST00000459576 63 ntBASIC1.83□□□□□ -2.12
LSM4Q9Y4Z0 RPS27P21-201ENST00000486977 252 ntBASIC1.83□□□□□ -2.12
LSM4Q9Y4Z0 AC234781.5-201ENST00000508429 271 ntBASIC1.83□□□□□ -2.12
LSM4Q9Y4Z0 AC026436.1-201ENST00000510537 270 ntBASIC1.83□□□□□ -2.12
LSM4Q9Y4Z0 RNU6-1278P-201ENST00000516130 107 ntBASIC1.83□□□□□ -2.12
LSM4Q9Y4Z0 RNU6-635P-201ENST00000516651 102 ntBASIC1.83□□□□□ -2.12
LSM4Q9Y4Z0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.83□□□□□ -2.12
LSM4Q9Y4Z0 AC103810.6-201ENST00000606708 136 ntBASIC1.83□□□□□ -2.12
LSM4Q9Y4Z0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.83□□□□□ -2.12
LSM4Q9Y4Z0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
LSM4Q9Y4Z0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
LSM4Q9Y4Z0 Y_RNA.176-201ENST00000363815 109 ntBASIC1.82□□□□□ -2.12
LSM4Q9Y4Z0 RNU6-102P-201ENST00000384485 104 ntBASIC1.82□□□□□ -2.12
LSM4Q9Y4Z0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.82□□□□□ -2.12
LSM4Q9Y4Z0 POLR2KP2-201ENST00000438155 177 ntBASIC1.82□□□□□ -2.12
LSM4Q9Y4Z0 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.82□□□□□ -2.12
LSM4Q9Y4Z0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.82□□□□□ -2.12
LSM4Q9Y4Z0 RNA5SP233-201ENST00000459153 113 ntBASIC1.82□□□□□ -2.12
LSM4Q9Y4Z0 HMGN1P10-201ENST00000474557 553 ntBASIC1.82□□□□□ -2.12
LSM4Q9Y4Z0 RNU6-1337P-201ENST00000516525 95 ntBASIC1.82□□□□□ -2.12
LSM4Q9Y4Z0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.82□□□□□ -2.12
LSM4Q9Y4Z0 AC121758.2-201ENST00000553271 193 ntBASIC1.82□□□□□ -2.12
LSM4Q9Y4Z0 AC008269.2-201ENST00000561915 1105 ntBASIC1.82□□□□□ -2.12
LSM4Q9Y4Z0 MIR1273D-201ENST00000577266 86 ntBASIC1.82□□□□□ -2.12
LSM4Q9Y4Z0 MIR4299-201ENST00000577899 72 ntBASIC1.82□□□□□ -2.12
LSM4Q9Y4Z0 MIR5007-201ENST00000583098 95 ntBASIC1.82□□□□□ -2.12
LSM4Q9Y4Z0 DEFB117-201ENST00000602356 141 ntBASIC1.82□□□□□ -2.12
LSM4Q9Y4Z0 AL627230.6-201ENST00000611129 280 ntBASIC1.82□□□□□ -2.12
LSM4Q9Y4Z0 MIR6766-201ENST00000622641 72 ntBASIC1.82□□□□□ -2.12
LSM4Q9Y4Z0 AL356292.1-201ENST00000283110 373 ntBASIC1.81□□□□□ -2.12
LSM4Q9Y4Z0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.81□□□□□ -2.12
LSM4Q9Y4Z0 Y_RNA.569-201ENST00000384749 103 ntBASIC1.81□□□□□ -2.12
LSM4Q9Y4Z0 Y_RNA.574-201ENST00000384766 95 ntBASIC1.81□□□□□ -2.12
LSM4Q9Y4Z0 MIR215-201ENST00000384858 110 ntBASIC1.81□□□□□ -2.12
LSM4Q9Y4Z0 RPL21P38-201ENST00000418090 167 ntBASIC1.81□□□□□ -2.12
LSM4Q9Y4Z0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.81□□□□□ -2.12
LSM4Q9Y4Z0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.81□□□□□ -2.12
LSM4Q9Y4Z0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.81□□□□□ -2.12
LSM4Q9Y4Z0 RPL23AP63-201ENST00000498752 471 ntBASIC1.81□□□□□ -2.12
LSM4Q9Y4Z0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.81□□□□□ -2.12
LSM4Q9Y4Z0 RNA5SP481-201ENST00000516814 122 ntBASIC1.81□□□□□ -2.12
LSM4Q9Y4Z0 IGLV3-17-201ENST00000519099 244 ntBASIC1.81□□□□□ -2.12
LSM4Q9Y4Z0 AC022254.1-201ENST00000567857 235 ntBASIC1.81□□□□□ -2.12
LSM4Q9Y4Z0 AC073413.2-201ENST00000604332 360 ntBASIC1.81□□□□□ -2.12
LSM4Q9Y4Z0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.81□□□□□ -2.12
LSM4Q9Y4Z0 AC018630.2-201ENST00000534866 2403 ntBASIC1.81□□□□□ -2.12
LSM4Q9Y4Z0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.81□□□□□ -2.12
LSM4Q9Y4Z0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.8□□□□□ -2.12
LSM4Q9Y4Z0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
LSM4Q9Y4Z0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.8□□□□□ -2.12
LSM4Q9Y4Z0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms