Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 RNU6-136P-201ENST00000384663 107 ntBASIC2.93□□□□□ -1.94
R3HCC1Q9Y3T6 MIR196B-201ENST00000384852 84 ntBASIC2.93□□□□□ -1.94
R3HCC1Q9Y3T6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.93□□□□□ -1.94
R3HCC1Q9Y3T6 OOSP1P1-201ENST00000423265 274 ntBASIC2.93□□□□□ -1.94
R3HCC1Q9Y3T6 HSPE1P21-201ENST00000438283 308 ntBASIC2.93□□□□□ -1.94
R3HCC1Q9Y3T6 AC096725.1-201ENST00000514266 313 ntBASIC2.93□□□□□ -1.94
R3HCC1Q9Y3T6 RNU6-1146P-201ENST00000516282 102 ntBASIC2.93□□□□□ -1.94
R3HCC1Q9Y3T6 RNU7-172P-201ENST00000517125 64 ntBASIC2.93□□□□□ -1.94
R3HCC1Q9Y3T6 AC024405.2-202ENST00000532731 184 ntBASIC2.93□□□□□ -1.94
R3HCC1Q9Y3T6 MIR5692C2-201ENST00000577959 77 ntBASIC2.93□□□□□ -1.94
R3HCC1Q9Y3T6 AL353149.1-201ENST00000610667 244 ntBASIC2.93□□□□□ -1.94
R3HCC1Q9Y3T6 AC022513.1-201ENST00000624512 117 ntBASIC2.93□□□□□ -1.94
R3HCC1Q9Y3T6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
R3HCC1Q9Y3T6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
R3HCC1Q9Y3T6 RNU6-23P-201ENST00000363283 107 ntBASIC2.92□□□□□ -1.94
R3HCC1Q9Y3T6 Y_RNA.785-201ENST00000384290 109 ntBASIC2.92□□□□□ -1.94
R3HCC1Q9Y3T6 MIR518C-201ENST00000384822 101 ntBASIC2.92□□□□□ -1.94
R3HCC1Q9Y3T6 EBAG9P1-201ENST00000418955 543 ntBASIC2.92□□□□□ -1.94
R3HCC1Q9Y3T6 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.92□□□□□ -1.94
R3HCC1Q9Y3T6 AC063976.3-201ENST00000426849 329 ntBASIC2.92□□□□□ -1.94
R3HCC1Q9Y3T6 AC117454.1-201ENST00000491120 168 ntBASIC2.92□□□□□ -1.94
R3HCC1Q9Y3T6 RN7SL636P-201ENST00000497504 294 ntBASIC2.92□□□□□ -1.94
R3HCC1Q9Y3T6 YWHAEP4-201ENST00000505390 198 ntBASIC2.92□□□□□ -1.94
R3HCC1Q9Y3T6 RNA5SP137-201ENST00000516833 135 ntBASIC2.92□□□□□ -1.94
R3HCC1Q9Y3T6 RNU7-128P-201ENST00000517247 62 ntBASIC2.92□□□□□ -1.94
R3HCC1Q9Y3T6 SNORA81.3-201ENST00000517283 198 ntBASIC2.92□□□□□ -1.94
R3HCC1Q9Y3T6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.92□□□□□ -1.94
R3HCC1Q9Y3T6 AC015720.1-201ENST00000565251 277 ntBASIC2.92□□□□□ -1.94
R3HCC1Q9Y3T6 SNORD14A-201ENST00000606526 91 ntBASIC2.92□□□□□ -1.94
R3HCC1Q9Y3T6 RNU1-58P-201ENST00000362413 163 ntBASIC2.91□□□□□ -1.94
R3HCC1Q9Y3T6 RNU6-859P-201ENST00000362728 107 ntBASIC2.91□□□□□ -1.94
R3HCC1Q9Y3T6 RNU6-862P-201ENST00000362804 105 ntBASIC2.91□□□□□ -1.94
R3HCC1Q9Y3T6 RNU6-653P-201ENST00000363074 106 ntBASIC2.91□□□□□ -1.94
R3HCC1Q9Y3T6 RNU1-96P-201ENST00000364163 162 ntBASIC2.91□□□□□ -1.94
R3HCC1Q9Y3T6 RNU6-1186P-201ENST00000410429 97 ntBASIC2.91□□□□□ -1.94
R3HCC1Q9Y3T6 RNA5SP184-201ENST00000411071 108 ntBASIC2.91□□□□□ -1.94
R3HCC1Q9Y3T6 AC099677.2-201ENST00000436385 175 ntBASIC2.91□□□□□ -1.94
R3HCC1Q9Y3T6 AL109933.2-201ENST00000452651 260 ntBASIC2.91□□□□□ -1.94
R3HCC1Q9Y3T6 SNORD109B-201ENST00000458961 67 ntBASIC2.91□□□□□ -1.94
R3HCC1Q9Y3T6 SNORD109A-201ENST00000459128 67 ntBASIC2.91□□□□□ -1.94
R3HCC1Q9Y3T6 AL049873.1-201ENST00000480540 376 ntBASIC2.91□□□□□ -1.94
R3HCC1Q9Y3T6 HMGB3P3-201ENST00000510526 400 ntBASIC2.91□□□□□ -1.94
R3HCC1Q9Y3T6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.91□□□□□ -1.94
R3HCC1Q9Y3T6 CBX3P4-201ENST00000538909 354 ntBASIC2.91□□□□□ -1.94
R3HCC1Q9Y3T6 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.91□□□□□ -1.94
R3HCC1Q9Y3T6 U6.108-201ENST00000637764 58 ntBASIC2.91□□□□□ -1.94
R3HCC1Q9Y3T6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
R3HCC1Q9Y3T6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
R3HCC1Q9Y3T6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
R3HCC1Q9Y3T6 AC245060.5-201ENST00000610778 3293 ntBASIC2.9□□□□□ -1.94
R3HCC1Q9Y3T6 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
R3HCC1Q9Y3T6 AC005336.3-201ENST00000623833 2679 ntBASIC2.9□□□□□ -1.94
R3HCC1Q9Y3T6 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
R3HCC1Q9Y3T6 RNU6-899P-201ENST00000363947 107 ntBASIC2.9□□□□□ -1.95
R3HCC1Q9Y3T6 RNU4-10P-201ENST00000364383 140 ntBASIC2.9□□□□□ -1.95
R3HCC1Q9Y3T6 RNU1-112P-201ENST00000364401 164 ntBASIC2.9□□□□□ -1.95
R3HCC1Q9Y3T6 RNU6-923P-201ENST00000364753 107 ntBASIC2.9□□□□□ -1.95
R3HCC1Q9Y3T6 Y_RNA.308-201ENST00000365043 101 ntBASIC2.9□□□□□ -1.95
R3HCC1Q9Y3T6 RNU6-47P-201ENST00000383866 107 ntBASIC2.9□□□□□ -1.95
R3HCC1Q9Y3T6 MIR29C-201ENST00000385231 88 ntBASIC2.9□□□□□ -1.95
R3HCC1Q9Y3T6 AL135786.1-201ENST00000415892 214 ntBASIC2.9□□□□□ -1.95
R3HCC1Q9Y3T6 AL162725.1-201ENST00000435405 301 ntBASIC2.9□□□□□ -1.95
R3HCC1Q9Y3T6 Y_RNA.644-201ENST00000459006 113 ntBASIC2.9□□□□□ -1.95
R3HCC1Q9Y3T6 RPL36AP21-201ENST00000490372 323 ntBASIC2.9□□□□□ -1.95
R3HCC1Q9Y3T6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.9□□□□□ -1.95
R3HCC1Q9Y3T6 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.9□□□□□ -1.95
R3HCC1Q9Y3T6 Y_RNA.674-201ENST00000516362 113 ntBASIC2.9□□□□□ -1.95
R3HCC1Q9Y3T6 RNU7-115P-201ENST00000516433 55 ntBASIC2.9□□□□□ -1.95
R3HCC1Q9Y3T6 AC079600.2-201ENST00000550076 130 ntBASIC2.9□□□□□ -1.95
R3HCC1Q9Y3T6 AC005972.2-201ENST00000604690 348 ntBASIC2.9□□□□□ -1.95
R3HCC1Q9Y3T6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
R3HCC1Q9Y3T6 RNA5SP393-201ENST00000363423 117 ntBASIC2.89□□□□□ -1.95
R3HCC1Q9Y3T6 Y_RNA.262-201ENST00000364641 102 ntBASIC2.89□□□□□ -1.95
R3HCC1Q9Y3T6 AL355497.1-201ENST00000406262 551 ntBASIC2.89□□□□□ -1.95
R3HCC1Q9Y3T6 RPS12P2-201ENST00000439728 269 ntBASIC2.89□□□□□ -1.95
R3HCC1Q9Y3T6 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.89□□□□□ -1.95
R3HCC1Q9Y3T6 RNA5SP356-201ENST00000515972 94 ntBASIC2.89□□□□□ -1.95
R3HCC1Q9Y3T6 RNU6-1278P-201ENST00000516130 107 ntBASIC2.89□□□□□ -1.95
R3HCC1Q9Y3T6 RNA5SP82-201ENST00000516707 92 ntBASIC2.89□□□□□ -1.95
R3HCC1Q9Y3T6 Y_RNA.700-201ENST00000516806 100 ntBASIC2.89□□□□□ -1.95
R3HCC1Q9Y3T6 MIR4635-201ENST00000583759 79 ntBASIC2.89□□□□□ -1.95
R3HCC1Q9Y3T6 MIR548AY-201ENST00000617669 107 ntBASIC2.89□□□□□ -1.95
R3HCC1Q9Y3T6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
R3HCC1Q9Y3T6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
R3HCC1Q9Y3T6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
R3HCC1Q9Y3T6 Y_RNA.29-201ENST00000362570 113 ntBASIC2.88□□□□□ -1.95
R3HCC1Q9Y3T6 MIR597-201ENST00000384968 97 ntBASIC2.88□□□□□ -1.95
R3HCC1Q9Y3T6 RNU6-493P-201ENST00000391321 108 ntBASIC2.88□□□□□ -1.95
R3HCC1Q9Y3T6 MIR1283-2-201ENST00000408621 87 ntBASIC2.88□□□□□ -1.95
R3HCC1Q9Y3T6 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.88□□□□□ -1.95
R3HCC1Q9Y3T6 AL138752.1-201ENST00000452964 351 ntBASIC2.88□□□□□ -1.95
R3HCC1Q9Y3T6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.88□□□□□ -1.95
R3HCC1Q9Y3T6 RN7SKP132-201ENST00000516001 208 ntBASIC2.88□□□□□ -1.95
R3HCC1Q9Y3T6 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.88□□□□□ -1.95
R3HCC1Q9Y3T6 AP005660.1-201ENST00000522972 293 ntBASIC2.88□□□□□ -1.95
R3HCC1Q9Y3T6 AC100767.1-201ENST00000528178 123 ntBASIC2.88□□□□□ -1.95
R3HCC1Q9Y3T6 MIR4319-201ENST00000577285 85 ntBASIC2.88□□□□□ -1.95
R3HCC1Q9Y3T6 MIR4308-201ENST00000580634 81 ntBASIC2.88□□□□□ -1.95
R3HCC1Q9Y3T6 AC073413.2-201ENST00000604332 360 ntBASIC2.88□□□□□ -1.95
R3HCC1Q9Y3T6 AP003357.1-201ENST00000604497 148 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms