Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 RNU6-559P-201ENST00000516151 98 ntBASIC1.21□□□□□ -2.22
FOXA2Q9Y261 RNU6-922P-201ENST00000516753 99 ntBASIC1.21□□□□□ -2.22
FOXA2Q9Y261 AC113139.1-201ENST00000605049 239 ntBASIC1.21□□□□□ -2.22
FOXA2Q9Y261 RNA5SP327-201ENST00000362494 101 ntBASIC1.2□□□□□ -2.22
FOXA2Q9Y261 RNU6-926P-201ENST00000384075 107 ntBASIC1.2□□□□□ -2.22
FOXA2Q9Y261 RNU6-890P-201ENST00000384121 107 ntBASIC1.2□□□□□ -2.22
FOXA2Q9Y261 RNU6-505P-201ENST00000384427 107 ntBASIC1.2□□□□□ -2.22
FOXA2Q9Y261 MIR520G-201ENST00000385064 90 ntBASIC1.2□□□□□ -2.22
FOXA2Q9Y261 Y_RNA.605-201ENST00000410577 105 ntBASIC1.2□□□□□ -2.22
FOXA2Q9Y261 AC233266.1-201ENST00000454518 96 ntBASIC1.2□□□□□ -2.22
FOXA2Q9Y261 RNU7-169P-201ENST00000459456 61 ntBASIC1.2□□□□□ -2.22
FOXA2Q9Y261 PRDX4P1-201ENST00000507189 574 ntBASIC1.2□□□□□ -2.22
FOXA2Q9Y261 RNU6-1291P-201ENST00000516591 104 ntBASIC1.2□□□□□ -2.22
FOXA2Q9Y261 RNA5SP168-201ENST00000516642 112 ntBASIC1.2□□□□□ -2.22
FOXA2Q9Y261 SNORA31.24-201ENST00000517232 57 ntBASIC1.2□□□□□ -2.22
FOXA2Q9Y261 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.2□□□□□ -2.22
FOXA2Q9Y261 AC091178.2-201ENST00000584401 117 ntBASIC1.2□□□□□ -2.22
FOXA2Q9Y261 AC242852.1-201ENST00000612151 96 ntBASIC1.2□□□□□ -2.22
FOXA2Q9Y261 AC087588.2-201ENST00000617667 426 ntBASIC1.2□□□□□ -2.22
FOXA2Q9Y261 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.2□□□□□ -2.22
FOXA2Q9Y261 AC244015.1-201ENST00000622301 99 ntBASIC1.2□□□□□ -2.22
FOXA2Q9Y261 AC068647.2-201ENST00000637380 353 ntBASIC1.2□□□□□ -2.22
FOXA2Q9Y261 SNORA1B-201ENST00000362535 133 ntBASIC1.19□□□□□ -2.22
FOXA2Q9Y261 RNU6-199P-201ENST00000362954 107 ntBASIC1.19□□□□□ -2.22
FOXA2Q9Y261 Y_RNA.124-201ENST00000363339 93 ntBASIC1.19□□□□□ -2.22
FOXA2Q9Y261 RNU1-42P-201ENST00000364033 160 ntBASIC1.19□□□□□ -2.22
FOXA2Q9Y261 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.19□□□□□ -2.22
FOXA2Q9Y261 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.19□□□□□ -2.22
FOXA2Q9Y261 CALM2P4-201ENST00000430810 426 ntBASIC1.19□□□□□ -2.22
FOXA2Q9Y261 FCF1P4-201ENST00000448326 183 ntBASIC1.19□□□□□ -2.22
FOXA2Q9Y261 AC105758.1-201ENST00000506038 399 ntBASIC1.19□□□□□ -2.22
FOXA2Q9Y261 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.19□□□□□ -2.22
FOXA2Q9Y261 AC023442.1-201ENST00000531247 422 ntBASIC1.19□□□□□ -2.22
FOXA2Q9Y261 AC006380.1-201ENST00000603598 186 ntBASIC1.19□□□□□ -2.22
FOXA2Q9Y261 AL513534.2-201ENST00000603836 250 ntBASIC1.19□□□□□ -2.22
FOXA2Q9Y261 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
FOXA2Q9Y261 ZNF72P-201ENST00000425869 1908 ntBASIC1.19□□□□□ -2.22
FOXA2Q9Y261 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
FOXA2Q9Y261 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
FOXA2Q9Y261 RNU6-424P-201ENST00000384367 105 ntBASIC1.18□□□□□ -2.22
FOXA2Q9Y261 RNU6-136P-201ENST00000384663 107 ntBASIC1.18□□□□□ -2.22
FOXA2Q9Y261 MIR628-201ENST00000385229 95 ntBASIC1.18□□□□□ -2.22
FOXA2Q9Y261 RNU6-482P-201ENST00000391068 107 ntBASIC1.18□□□□□ -2.22
FOXA2Q9Y261 RNA5SP482-201ENST00000391269 118 ntBASIC1.18□□□□□ -2.22
FOXA2Q9Y261 U8.16-201ENST00000391279 133 ntBASIC1.18□□□□□ -2.22
FOXA2Q9Y261 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.18□□□□□ -2.22
FOXA2Q9Y261 RNU6-470P-201ENST00000515954 104 ntBASIC1.18□□□□□ -2.22
FOXA2Q9Y261 RNU7-12P-201ENST00000516030 62 ntBASIC1.18□□□□□ -2.22
FOXA2Q9Y261 SNORA70.12-201ENST00000516084 153 ntBASIC1.18□□□□□ -2.22
FOXA2Q9Y261 RNU7-40P-201ENST00000516397 64 ntBASIC1.18□□□□□ -2.22
FOXA2Q9Y261 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.18□□□□□ -2.22
FOXA2Q9Y261 AC005828.6-201ENST00000606610 232 ntBASIC1.18□□□□□ -2.22
FOXA2Q9Y261 AC025253.1-201ENST00000613623 543 ntBASIC1.18□□□□□ -2.22
FOXA2Q9Y261 AC004467.1-201ENST00000615678 330 ntBASIC1.18□□□□□ -2.22
FOXA2Q9Y261 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.18□□□□□ -2.22
FOXA2Q9Y261 AC099654.14-201ENST00000638599 341 ntBASIC1.18□□□□□ -2.22
FOXA2Q9Y261 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
FOXA2Q9Y261 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.18□□□□□ -2.22
FOXA2Q9Y261 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
FOXA2Q9Y261 Y_RNA.243-201ENST00000364481 109 ntBASIC1.17□□□□□ -2.22
FOXA2Q9Y261 RNU6-60P-201ENST00000364792 103 ntBASIC1.17□□□□□ -2.22
FOXA2Q9Y261 Y_RNA.314-201ENST00000365114 102 ntBASIC1.17□□□□□ -2.22
FOXA2Q9Y261 RNU6-1297P-201ENST00000384415 104 ntBASIC1.17□□□□□ -2.22
FOXA2Q9Y261 MIR1323-201ENST00000408090 73 ntBASIC1.17□□□□□ -2.22
FOXA2Q9Y261 DYNLT3P2-201ENST00000442517 295 ntBASIC1.17□□□□□ -2.22
FOXA2Q9Y261 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.17□□□□□ -2.22
FOXA2Q9Y261 AL049830.1-201ENST00000468034 425 ntBASIC1.17□□□□□ -2.22
FOXA2Q9Y261 OR9P1P-201ENST00000496431 281 ntBASIC1.17□□□□□ -2.22
FOXA2Q9Y261 RNU6-322P-201ENST00000516010 103 ntBASIC1.17□□□□□ -2.22
FOXA2Q9Y261 SNORA20.3-201ENST00000516880 132 ntBASIC1.17□□□□□ -2.22
FOXA2Q9Y261 RNU6-1096P-201ENST00000517089 102 ntBASIC1.17□□□□□ -2.22
FOXA2Q9Y261 AC015720.1-201ENST00000565251 277 ntBASIC1.17□□□□□ -2.22
FOXA2Q9Y261 AL355073.2-201ENST00000612106 557 ntBASIC1.17□□□□□ -2.22
FOXA2Q9Y261 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.17□□□□□ -2.22
FOXA2Q9Y261 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.17□□□□□ -2.22
FOXA2Q9Y261 AC005592.1-201ENST00000566527 1640 ntBASIC1.16□□□□□ -2.22
FOXA2Q9Y261 Y_RNA.259-201ENST00000364619 101 ntBASIC1.16□□□□□ -2.22
FOXA2Q9Y261 Y_RNA.474-201ENST00000384341 102 ntBASIC1.16□□□□□ -2.22
FOXA2Q9Y261 AL451046.2-201ENST00000403074 277 ntBASIC1.16□□□□□ -2.22
FOXA2Q9Y261 AC138393.2-201ENST00000414742 246 ntBASIC1.16□□□□□ -2.22
FOXA2Q9Y261 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.16□□□□□ -2.22
FOXA2Q9Y261 AL354695.1-201ENST00000427935 228 ntBASIC1.16□□□□□ -2.22
FOXA2Q9Y261 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.16□□□□□ -2.22
FOXA2Q9Y261 MTCO3P10-201ENST00000455912 772 ntBASIC1.16□□□□□ -2.22
FOXA2Q9Y261 RNU6-63P-201ENST00000516690 95 ntBASIC1.16□□□□□ -2.22
FOXA2Q9Y261 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.16□□□□□ -2.22
FOXA2Q9Y261 GHRLOS.1-201ENST00000610995 70 ntBASIC1.16□□□□□ -2.22
FOXA2Q9Y261 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
FOXA2Q9Y261 SNORD114-7-201ENST00000362520 77 ntBASIC1.15□□□□□ -2.23
FOXA2Q9Y261 RNU6-961P-201ENST00000363893 105 ntBASIC1.15□□□□□ -2.23
FOXA2Q9Y261 RNU6-457P-201ENST00000363999 107 ntBASIC1.15□□□□□ -2.23
FOXA2Q9Y261 RNA5SP99-201ENST00000364020 114 ntBASIC1.15□□□□□ -2.23
FOXA2Q9Y261 RNU6-117P-201ENST00000365415 107 ntBASIC1.15□□□□□ -2.23
FOXA2Q9Y261 RNY3P4-201ENST00000384428 101 ntBASIC1.15□□□□□ -2.23
FOXA2Q9Y261 RNU6-939P-201ENST00000384634 107 ntBASIC1.15□□□□□ -2.23
FOXA2Q9Y261 MIR222-201ENST00000384992 110 ntBASIC1.15□□□□□ -2.23
FOXA2Q9Y261 MIR150-201ENST00000385048 84 ntBASIC1.15□□□□□ -2.23
FOXA2Q9Y261 MIR618-201ENST00000385287 98 ntBASIC1.15□□□□□ -2.23
FOXA2Q9Y261 SNORD78.2-201ENST00000391076 69 ntBASIC1.15□□□□□ -2.23
FOXA2Q9Y261 AC093850.1-201ENST00000454121 251 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms