Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 POLR3GP2-201ENST00000588366 668 ntBASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 Z83818.1-201ENST00000603584 150 ntBASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 RNU6-89P-201ENST00000606519 100 ntBASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 RMST_2.1-201ENST00000617263 136 ntBASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 AC097520.1-201ENST00000624435 385 ntBASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 AC099654.12-201ENST00000639868 649 ntBASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 Y_RNA.122-201ENST00000363331 96 ntBASIC0.22□□□□□ -2.37
HHLA3Q9XRX5 RNU6-117P-201ENST00000365415 107 ntBASIC0.22□□□□□ -2.37
HHLA3Q9XRX5 VTRNA1-3-201ENST00000365645 89 ntBASIC0.22□□□□□ -2.37
HHLA3Q9XRX5 RNU6-128P-201ENST00000383976 107 ntBASIC0.22□□□□□ -2.37
HHLA3Q9XRX5 SNORA36.2-201ENST00000384004 127 ntBASIC0.22□□□□□ -2.37
HHLA3Q9XRX5 RPS20P10-201ENST00000451209 253 ntBASIC0.22□□□□□ -2.37
HHLA3Q9XRX5 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.22□□□□□ -2.37
HHLA3Q9XRX5 AC002350.1-201ENST00000490759 375 ntBASIC0.22□□□□□ -2.37
HHLA3Q9XRX5 AC114811.1-201ENST00000507207 168 ntBASIC0.22□□□□□ -2.37
HHLA3Q9XRX5 RN7SKP12-201ENST00000516275 143 ntBASIC0.22□□□□□ -2.37
HHLA3Q9XRX5 Y_RNA.683-201ENST00000516508 93 ntBASIC0.22□□□□□ -2.37
HHLA3Q9XRX5 AC134698.4-201ENST00000523451 826 ntBASIC0.22□□□□□ -2.37
HHLA3Q9XRX5 AF235103.2-201ENST00000525753 346 ntBASIC0.22□□□□□ -2.37
HHLA3Q9XRX5 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.22□□□□□ -2.37
HHLA3Q9XRX5 MIR5696-201ENST00000578474 85 ntBASIC0.22□□□□□ -2.37
HHLA3Q9XRX5 AC022709.1-201ENST00000615967 87 ntBASIC0.22□□□□□ -2.37
HHLA3Q9XRX5 AC027279.3-201ENST00000625055 122 ntBASIC0.22□□□□□ -2.37
HHLA3Q9XRX5 MIR6516-201ENST00000630554 81 ntBASIC0.22□□□□□ -2.37
HHLA3Q9XRX5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.22□□□□□ -2.37
HHLA3Q9XRX5 RNU5F-3P-201ENST00000363767 117 ntBASIC0.21□□□□□ -2.38
HHLA3Q9XRX5 Y_RNA.231-201ENST00000364358 102 ntBASIC0.21□□□□□ -2.38
HHLA3Q9XRX5 Y_RNA.354-201ENST00000365448 111 ntBASIC0.21□□□□□ -2.38
HHLA3Q9XRX5 RNU6-281P-201ENST00000384212 103 ntBASIC0.21□□□□□ -2.38
HHLA3Q9XRX5 MIR517A-201ENST00000385001 87 ntBASIC0.21□□□□□ -2.38
HHLA3Q9XRX5 RNU1-139P-201ENST00000391307 165 ntBASIC0.21□□□□□ -2.38
HHLA3Q9XRX5 MIR1298-201ENST00000408783 112 ntBASIC0.21□□□□□ -2.38
HHLA3Q9XRX5 AC243428.1-201ENST00000421099 264 ntBASIC0.21□□□□□ -2.38
HHLA3Q9XRX5 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.21□□□□□ -2.38
HHLA3Q9XRX5 AC046134.1-201ENST00000514454 666 ntBASIC0.21□□□□□ -2.38
HHLA3Q9XRX5 RNU6-1096P-201ENST00000517089 102 ntBASIC0.21□□□□□ -2.38
HHLA3Q9XRX5 SNORA74.3-201ENST00000517108 154 ntBASIC0.21□□□□□ -2.38
HHLA3Q9XRX5 AL358944.1-201ENST00000528537 144 ntBASIC0.21□□□□□ -2.38
HHLA3Q9XRX5 AC073114.1-201ENST00000612027 490 ntBASIC0.21□□□□□ -2.38
HHLA3Q9XRX5 MIR6515-201ENST00000619843 57 ntBASIC0.21□□□□□ -2.38
HHLA3Q9XRX5 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.21□□□□□ -2.38
HHLA3Q9XRX5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
HHLA3Q9XRX5 RNU6-1322P-201ENST00000364309 107 ntBASIC0.2□□□□□ -2.38
HHLA3Q9XRX5 RNU6-136P-201ENST00000384663 107 ntBASIC0.2□□□□□ -2.38
HHLA3Q9XRX5 MIR520C-201ENST00000385005 87 ntBASIC0.2□□□□□ -2.38
HHLA3Q9XRX5 MIR452-201ENST00000385020 85 ntBASIC0.2□□□□□ -2.38
HHLA3Q9XRX5 MIR516B2-201ENST00000385190 85 ntBASIC0.2□□□□□ -2.38
HHLA3Q9XRX5 SNORD105-201ENST00000386910 85 ntBASIC0.2□□□□□ -2.38
HHLA3Q9XRX5 SNORD111-201ENST00000408139 94 ntBASIC0.2□□□□□ -2.38
HHLA3Q9XRX5 MIR1827-201ENST00000408549 66 ntBASIC0.2□□□□□ -2.38
HHLA3Q9XRX5 ELOCP21-201ENST00000412558 336 ntBASIC0.2□□□□□ -2.38
HHLA3Q9XRX5 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.2□□□□□ -2.38
HHLA3Q9XRX5 AC067940.1-201ENST00000458411 300 ntBASIC0.2□□□□□ -2.38
HHLA3Q9XRX5 RNU6-1278P-201ENST00000516130 107 ntBASIC0.2□□□□□ -2.38
HHLA3Q9XRX5 RNA5SP134-201ENST00000516492 96 ntBASIC0.2□□□□□ -2.38
HHLA3Q9XRX5 Y_RNA.695-201ENST00000516715 107 ntBASIC0.2□□□□□ -2.38
HHLA3Q9XRX5 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 MIRLET7D-201ENST00000362263 87 ntBASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 RNU6-1252P-201ENST00000363054 104 ntBASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 RNU6-654P-201ENST00000364373 107 ntBASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 MIR520G-201ENST00000385064 90 ntBASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 MTCYBP4-201ENST00000401524 249 ntBASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 MIR1302-7-201ENST00000408841 72 ntBASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 RNA5SP193-201ENST00000410353 107 ntBASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 RNU6-994P-201ENST00000410507 111 ntBASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 PCNPP5-201ENST00000452246 481 ntBASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 RN7SKP298-201ENST00000515950 94 ntBASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 ACA59.1-201ENST00000515966 143 ntBASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 RNU6-63P-201ENST00000516690 95 ntBASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 MIR4764-201ENST00000580680 88 ntBASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 AL136317.1-201ENST00000612653 226 ntBASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 AL138726.1-201ENST00000614873 333 ntBASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 AC127459.3-201ENST00000624328 466 ntBASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 AC073544.1-201ENST00000600110 1595 ntBASIC0.19□□□□□ -2.38
HHLA3Q9XRX5 RNU6-222P-201ENST00000362438 107 ntBASIC0.18□□□□□ -2.38
HHLA3Q9XRX5 SNORD68-201ENST00000363214 84 ntBASIC0.18□□□□□ -2.38
HHLA3Q9XRX5 RNU6-1264P-201ENST00000383891 107 ntBASIC0.18□□□□□ -2.38
HHLA3Q9XRX5 Y_RNA.405-201ENST00000383979 100 ntBASIC0.18□□□□□ -2.38
HHLA3Q9XRX5 Y_RNA.451-201ENST00000384200 100 ntBASIC0.18□□□□□ -2.38
HHLA3Q9XRX5 Y_RNA.524-201ENST00000384564 100 ntBASIC0.18□□□□□ -2.38
HHLA3Q9XRX5 Y_RNA.561-201ENST00000384694 100 ntBASIC0.18□□□□□ -2.38
HHLA3Q9XRX5 RNU6-177P-201ENST00000411257 104 ntBASIC0.18□□□□□ -2.38
HHLA3Q9XRX5 RNU6-1304P-201ENST00000411374 106 ntBASIC0.18□□□□□ -2.38
HHLA3Q9XRX5 MTND3P23-201ENST00000431980 347 ntBASIC0.18□□□□□ -2.38
HHLA3Q9XRX5 ERLEC1P1-201ENST00000433806 578 ntBASIC0.18□□□□□ -2.38
HHLA3Q9XRX5 MTATP6P13-201ENST00000438531 667 ntBASIC0.18□□□□□ -2.38
HHLA3Q9XRX5 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.18□□□□□ -2.38
HHLA3Q9XRX5 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.18□□□□□ -2.38
HHLA3Q9XRX5 RNU7-175P-201ENST00000515915 61 ntBASIC0.18□□□□□ -2.38
HHLA3Q9XRX5 RNA5SP436-201ENST00000516020 115 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms