Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 MTND4P7-201ENST00000523876 130 ntBASIC-0.14□□□□□ -2.43
SCN8AQ9UQD0 AP003461.1-201ENST00000528866 78 ntBASIC-0.14□□□□□ -2.43
SCN8AQ9UQD0 AP002963.1-201ENST00000530590 184 ntBASIC-0.14□□□□□ -2.43
SCN8AQ9UQD0 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.14□□□□□ -2.43
SCN8AQ9UQD0 SNORA25.18-201ENST00000607153 114 ntBASIC-0.14□□□□□ -2.43
SCN8AQ9UQD0 AC016597.2-201ENST00000613256 341 ntBASIC-0.14□□□□□ -2.43
SCN8AQ9UQD0 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.14□□□□□ -2.43
SCN8AQ9UQD0 AC005592.1-201ENST00000566527 1640 ntBASIC-0.15□□□□□ -2.43
SCN8AQ9UQD0 SNORD114-7-201ENST00000362520 77 ntBASIC-0.15□□□□□ -2.43
SCN8AQ9UQD0 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
SCN8AQ9UQD0 MTND2P9-201ENST00000422293 931 ntBASIC-0.15□□□□□ -2.43
SCN8AQ9UQD0 SEPT7P4-201ENST00000437076 306 ntBASIC-0.15□□□□□ -2.43
SCN8AQ9UQD0 MTATP6P14-201ENST00000455189 673 ntBASIC-0.15□□□□□ -2.43
SCN8AQ9UQD0 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.15□□□□□ -2.43
SCN8AQ9UQD0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.15□□□□□ -2.43
SCN8AQ9UQD0 RNU6-189P-201ENST00000516120 101 ntBASIC-0.15□□□□□ -2.43
SCN8AQ9UQD0 AC104260.1-201ENST00000616660 539 ntBASIC-0.15□□□□□ -2.43
SCN8AQ9UQD0 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.15□□□□□ -2.43
SCN8AQ9UQD0 RNU6-74P-201ENST00000384235 107 ntBASIC-0.15□□□□□ -2.43
SCN8AQ9UQD0 SNORA8.3-201ENST00000384679 139 ntBASIC-0.15□□□□□ -2.43
SCN8AQ9UQD0 ZNF885P-201ENST00000420174 1098 ntBASIC-0.15□□□□□ -2.43
SCN8AQ9UQD0 AC018865.2-201ENST00000423631 129 ntBASIC-0.15□□□□□ -2.43
SCN8AQ9UQD0 SNORA18.7-201ENST00000516910 131 ntBASIC-0.15□□□□□ -2.43
SCN8AQ9UQD0 AL391834.2-201ENST00000609982 546 ntBASIC-0.15□□□□□ -2.43
SCN8AQ9UQD0 uc_338.34-201ENST00000617467 174 ntBASIC-0.15□□□□□ -2.43
SCN8AQ9UQD0 AC015726.2-201ENST00000620112 122 ntBASIC-0.15□□□□□ -2.43
SCN8AQ9UQD0 PDCL2P1-201ENST00000419302 352 ntBASIC-0.16□□□□□ -2.44
SCN8AQ9UQD0 RNU7-56P-201ENST00000458744 62 ntBASIC-0.16□□□□□ -2.44
SCN8AQ9UQD0 AC114811.1-201ENST00000507207 168 ntBASIC-0.16□□□□□ -2.44
SCN8AQ9UQD0 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.16□□□□□ -2.44
SCN8AQ9UQD0 AC112693.2-201ENST00000556538 232 ntBASIC-0.16□□□□□ -2.44
SCN8AQ9UQD0 AL158211.1-201ENST00000566763 763 ntBASIC-0.16□□□□□ -2.44
SCN8AQ9UQD0 AC011458.1-201ENST00000604034 617 ntBASIC-0.16□□□□□ -2.44
SCN8AQ9UQD0 SNORA72.1-201ENST00000363485 129 ntBASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 SNORD118-201ENST00000363593 134 ntBASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 SNORD95.1-201ENST00000364099 68 ntBASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 RNY4P34-201ENST00000364779 95 ntBASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 RNU6V-201ENST00000384105 107 ntBASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 RNU6-456P-201ENST00000384493 107 ntBASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 MIR15B-201ENST00000385045 98 ntBASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 MIR1298-201ENST00000408783 112 ntBASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 AL355375.2-201ENST00000574825 175 ntBASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 MIR4264-201ENST00000583520 66 ntBASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 AP001506.1-201ENST00000615444 211 ntBASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 AL008636.1-201ENST00000625038 1018 ntBASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 MIR1295B-201ENST00000636144 60 ntBASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 SNORA27.1-201ENST00000362604 124 ntBASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 RNU6-654P-201ENST00000364373 107 ntBASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 RNU6-407P-201ENST00000365280 104 ntBASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 RNU6-364P-201ENST00000384387 107 ntBASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 MIR610-201ENST00000385139 96 ntBASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 USP9YP12-201ENST00000450481 570 ntBASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 MIR4300-201ENST00000581016 96 ntBASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.17□□□□□ -2.44
SCN8AQ9UQD0 MIR377-201ENST00000362145 69 ntBASIC-0.18□□□□□ -2.44
SCN8AQ9UQD0 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.18□□□□□ -2.44
SCN8AQ9UQD0 SNORD115-32-201ENST00000364079 82 ntBASIC-0.18□□□□□ -2.44
SCN8AQ9UQD0 AC243428.1-201ENST00000421099 264 ntBASIC-0.18□□□□□ -2.44
SCN8AQ9UQD0 MRPS10P1-201ENST00000448483 130 ntBASIC-0.18□□□□□ -2.44
SCN8AQ9UQD0 AC104692.1-201ENST00000472406 90 ntBASIC-0.18□□□□□ -2.44
SCN8AQ9UQD0 AC107401.1-201ENST00000503426 685 ntBASIC-0.18□□□□□ -2.44
SCN8AQ9UQD0 RNA5SP227-201ENST00000516184 113 ntBASIC-0.18□□□□□ -2.44
SCN8AQ9UQD0 AL158209.2-201ENST00000619266 216 ntBASIC-0.18□□□□□ -2.44
SCN8AQ9UQD0 AC009248.2-201ENST00000619826 254 ntBASIC-0.18□□□□□ -2.44
SCN8AQ9UQD0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.18□□□□□ -2.44
SCN8AQ9UQD0 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.19□□□□□ -2.44
SCN8AQ9UQD0 Y_RNA.167-201ENST00000363735 109 ntBASIC-0.19□□□□□ -2.44
SCN8AQ9UQD0 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.19□□□□□ -2.44
SCN8AQ9UQD0 RNU6-325P-201ENST00000411132 105 ntBASIC-0.19□□□□□ -2.44
SCN8AQ9UQD0 AC093303.1-201ENST00000514549 295 ntBASIC-0.19□□□□□ -2.44
SCN8AQ9UQD0 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-0.19□□□□□ -2.44
SCN8AQ9UQD0 UBL5P4-201ENST00000562584 236 ntBASIC-0.19□□□□□ -2.44
SCN8AQ9UQD0 PIGPP4-201ENST00000584447 307 ntBASIC-0.19□□□□□ -2.44
SCN8AQ9UQD0 AC091304.9-201ENST00000612091 226 ntBASIC-0.19□□□□□ -2.44
SCN8AQ9UQD0 AC022306.3-201ENST00000619930 550 ntBASIC-0.19□□□□□ -2.44
SCN8AQ9UQD0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
SCN8AQ9UQD0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
SCN8AQ9UQD0 RNU4-28P-201ENST00000364739 141 ntBASIC-0.19□□□□□ -2.44
SCN8AQ9UQD0 RNU4-9P-201ENST00000364951 139 ntBASIC-0.19□□□□□ -2.44
SCN8AQ9UQD0 RNU6-302P-201ENST00000365249 107 ntBASIC-0.19□□□□□ -2.44
SCN8AQ9UQD0 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.19□□□□□ -2.44
SCN8AQ9UQD0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.19□□□□□ -2.44
SCN8AQ9UQD0 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.19□□□□□ -2.44
SCN8AQ9UQD0 UBE2V1P12-201ENST00000503954 474 ntBASIC-0.19□□□□□ -2.44
SCN8AQ9UQD0 SNORA19.2-201ENST00000516013 114 ntBASIC-0.19□□□□□ -2.44
SCN8AQ9UQD0 MTND2P38-201ENST00000522536 667 ntBASIC-0.19□□□□□ -2.44
SCN8AQ9UQD0 AC087588.2-201ENST00000617667 426 ntBASIC-0.19□□□□□ -2.44
SCN8AQ9UQD0 SNORD114-31-201ENST00000363219 75 ntBASIC-0.2□□□□□ -2.44
SCN8AQ9UQD0 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.2□□□□□ -2.44
SCN8AQ9UQD0 MIR516B2-201ENST00000385190 85 ntBASIC-0.2□□□□□ -2.44
SCN8AQ9UQD0 RNU4-49P-201ENST00000516080 140 ntBASIC-0.2□□□□□ -2.44
SCN8AQ9UQD0 AC023442.1-201ENST00000531247 422 ntBASIC-0.2□□□□□ -2.44
SCN8AQ9UQD0 AC093027.1-201ENST00000546698 429 ntBASIC-0.2□□□□□ -2.44
SCN8AQ9UQD0 MIR4743-201ENST00000584576 69 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms