Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 Y_RNA.673-201ENST00000516306 88 ntBASIC2.27□□□□□ -2.05
VPS4AQ9UN37 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS4AQ9UN37 MIR3128-201ENST00000581957 66 ntBASIC2.27□□□□□ -2.05
VPS4AQ9UN37 AC067747.1-201ENST00000608026 250 ntBASIC2.27□□□□□ -2.05
VPS4AQ9UN37 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
VPS4AQ9UN37 SNORD114-1-201ENST00000362705 72 ntBASIC2.26□□□□□ -2.05
VPS4AQ9UN37 RNU6-379P-201ENST00000363813 104 ntBASIC2.26□□□□□ -2.05
VPS4AQ9UN37 RNU6-1240P-201ENST00000365155 104 ntBASIC2.26□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.416-201ENST00000384014 113 ntBASIC2.26□□□□□ -2.05
VPS4AQ9UN37 SNORA20B-201ENST00000384220 132 ntBASIC2.26□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.478-201ENST00000384358 107 ntBASIC2.26□□□□□ -2.05
VPS4AQ9UN37 AL359511.1-201ENST00000402970 211 ntBASIC2.26□□□□□ -2.05
VPS4AQ9UN37 MIR548H3-201ENST00000408771 118 ntBASIC2.26□□□□□ -2.05
VPS4AQ9UN37 AC234781.5-201ENST00000508429 271 ntBASIC2.26□□□□□ -2.05
VPS4AQ9UN37 RNU6-191P-201ENST00000516295 94 ntBASIC2.26□□□□□ -2.05
VPS4AQ9UN37 SNORA27.4-201ENST00000516650 95 ntBASIC2.26□□□□□ -2.05
VPS4AQ9UN37 RNU6-1271P-201ENST00000517049 105 ntBASIC2.26□□□□□ -2.05
VPS4AQ9UN37 SUMO2P18-201ENST00000518873 252 ntBASIC2.26□□□□□ -2.05
VPS4AQ9UN37 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.26□□□□□ -2.05
VPS4AQ9UN37 DEFB117-201ENST00000602356 141 ntBASIC2.26□□□□□ -2.05
VPS4AQ9UN37 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.26□□□□□ -2.05
VPS4AQ9UN37 U2.14-201ENST00000615943 113 ntBASIC2.26□□□□□ -2.05
VPS4AQ9UN37 SNORA27.1-201ENST00000362604 124 ntBASIC2.25□□□□□ -2.05
VPS4AQ9UN37 SNORA3A-201ENST00000364113 130 ntBASIC2.25□□□□□ -2.05
VPS4AQ9UN37 RPL23AP7-203ENST00000449021 469 ntBASIC2.25□□□□□ -2.05
VPS4AQ9UN37 RPL23AP42-201ENST00000471152 471 ntBASIC2.25□□□□□ -2.05
VPS4AQ9UN37 SCARNA24.2-201ENST00000516968 130 ntBASIC2.25□□□□□ -2.05
VPS4AQ9UN37 AC021269.2-201ENST00000532318 330 ntBASIC2.25□□□□□ -2.05
VPS4AQ9UN37 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS4AQ9UN37 AC026271.5-201ENST00000577873 130 ntBASIC2.25□□□□□ -2.05
VPS4AQ9UN37 AL353149.1-201ENST00000610667 244 ntBASIC2.25□□□□□ -2.05
VPS4AQ9UN37 AC022202.1-201ENST00000613515 211 ntBASIC2.25□□□□□ -2.05
VPS4AQ9UN37 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.25□□□□□ -2.05
VPS4AQ9UN37 MIR1291-201ENST00000627649 87 ntBASIC2.25□□□□□ -2.05
VPS4AQ9UN37 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.25□□□□□ -2.05
VPS4AQ9UN37 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
VPS4AQ9UN37 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS4AQ9UN37 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
VPS4AQ9UN37 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.217-201ENST00000364214 105 ntBASIC2.24□□□□□ -2.05
VPS4AQ9UN37 RNU6-160P-201ENST00000384591 107 ntBASIC2.24□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.539-201ENST00000384635 107 ntBASIC2.24□□□□□ -2.05
VPS4AQ9UN37 MIR518C-201ENST00000384822 101 ntBASIC2.24□□□□□ -2.05
VPS4AQ9UN37 MIR873-201ENST00000401120 77 ntBASIC2.24□□□□□ -2.05
VPS4AQ9UN37 AL603910.2-201ENST00000407268 136 ntBASIC2.24□□□□□ -2.05
VPS4AQ9UN37 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.641-201ENST00000459414 105 ntBASIC2.24□□□□□ -2.05
VPS4AQ9UN37 MIR4643-201ENST00000577473 78 ntBASIC2.24□□□□□ -2.05
VPS4AQ9UN37 MIR3169-201ENST00000578032 83 ntBASIC2.24□□□□□ -2.05
VPS4AQ9UN37 AC010900.2-201ENST00000604508 210 ntBASIC2.24□□□□□ -2.05
VPS4AQ9UN37 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
VPS4AQ9UN37 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
VPS4AQ9UN37 AC016717.2-201ENST00000609089 5141 ntBASIC2.24□□□□□ -2.05
VPS4AQ9UN37 AL596028.1-201ENST00000326971 197 ntBASIC2.23□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.60-201ENST00000362831 98 ntBASIC2.23□□□□□ -2.05
VPS4AQ9UN37 RNU4-80P-201ENST00000363200 141 ntBASIC2.23□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.275-201ENST00000364726 110 ntBASIC2.23□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.338-201ENST00000365320 114 ntBASIC2.23□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.476-201ENST00000384347 108 ntBASIC2.23□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.489-201ENST00000384410 101 ntBASIC2.23□□□□□ -2.05
VPS4AQ9UN37 AL117342.1-201ENST00000404861 406 ntBASIC2.23□□□□□ -2.05
VPS4AQ9UN37 AC245102.2-201ENST00000448956 180 ntBASIC2.23□□□□□ -2.05
VPS4AQ9UN37 HSPE1P13-201ENST00000451143 297 ntBASIC2.23□□□□□ -2.05
VPS4AQ9UN37 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.23□□□□□ -2.05
VPS4AQ9UN37 AC079804.2-201ENST00000490376 200 ntBASIC2.23□□□□□ -2.05
VPS4AQ9UN37 AC091959.1-201ENST00000495857 238 ntBASIC2.23□□□□□ -2.05
VPS4AQ9UN37 AC026436.1-201ENST00000510537 270 ntBASIC2.23□□□□□ -2.05
VPS4AQ9UN37 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.23□□□□□ -2.05
VPS4AQ9UN37 RNA5SP281-201ENST00000516504 135 ntBASIC2.23□□□□□ -2.05
VPS4AQ9UN37 MIR3145-201ENST00000580727 82 ntBASIC2.23□□□□□ -2.05
VPS4AQ9UN37 MIR4282-201ENST00000583613 67 ntBASIC2.23□□□□□ -2.05
VPS4AQ9UN37 AC037487.3-201ENST00000606668 112 ntBASIC2.23□□□□□ -2.05
VPS4AQ9UN37 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.22□□□□□ -2.05
VPS4AQ9UN37 MIRLET7G-201ENST00000362280 84 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.44-201ENST00000362676 108 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 RNU6-1266P-201ENST00000362794 105 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.82-201ENST00000363000 102 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.92-201ENST00000363043 102 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 RNY1-201ENST00000364228 113 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.235-201ENST00000364412 102 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.287-201ENST00000364853 94 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.306-201ENST00000365015 102 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.312-201ENST00000365089 102 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.322-201ENST00000365151 102 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.368-201ENST00000365547 113 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 SNORA6-201ENST00000384033 151 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 MIR29C-201ENST00000385231 88 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 RNU6-1248P-201ENST00000391096 64 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 RNU6-710P-201ENST00000410424 105 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 AL135790.2-201ENST00000437701 267 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.650-201ENST00000459002 102 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 AC011406.1-201ENST00000512440 370 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 SNORA70.12-201ENST00000516084 153 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.777-201ENST00000516982 102 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.22□□□□□ -2.05
VPS4AQ9UN37 RPL21P9-201ENST00000556149 474 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.771-201ENST00000598668 102 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.22□□□□□ -2.05
VPS4AQ9UN37 Y_RNA.789-201ENST00000622480 102 ntBASIC2.22□□□□□ -2.05
VPS4AQ9UN37 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms