Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.14□□□□□ -1.91
ZNRF3Q9ULT6 Y_RNA.797-201ENST00000515977 94 ntBASIC3.14□□□□□ -1.91
ZNRF3Q9ULT6 MIR4648-201ENST00000580107 72 ntBASIC3.14□□□□□ -1.91
ZNRF3Q9ULT6 AC004832.4-201ENST00000608952 331 ntBASIC3.14□□□□□ -1.91
ZNRF3Q9ULT6 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.14□□□□□ -1.91
ZNRF3Q9ULT6 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.14□□□□□ -1.91
ZNRF3Q9ULT6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.14□□□□□ -1.91
ZNRF3Q9ULT6 RNU6-103P-201ENST00000363686 107 ntBASIC3.13□□□□□ -1.91
ZNRF3Q9ULT6 SNORD116-13-201ENST00000384408 92 ntBASIC3.13□□□□□ -1.91
ZNRF3Q9ULT6 MIR181A2-201ENST00000384863 110 ntBASIC3.13□□□□□ -1.91
ZNRF3Q9ULT6 MIR627-201ENST00000384979 97 ntBASIC3.13□□□□□ -1.91
ZNRF3Q9ULT6 MIR626-201ENST00000385032 94 ntBASIC3.13□□□□□ -1.91
ZNRF3Q9ULT6 MIR526A2-201ENST00000390198 65 ntBASIC3.13□□□□□ -1.91
ZNRF3Q9ULT6 AC016909.1-201ENST00000415916 166 ntBASIC3.13□□□□□ -1.91
ZNRF3Q9ULT6 AL445687.1-201ENST00000439946 251 ntBASIC3.13□□□□□ -1.91
ZNRF3Q9ULT6 MTCO1P44-201ENST00000441935 243 ntBASIC3.13□□□□□ -1.91
ZNRF3Q9ULT6 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.13□□□□□ -1.91
ZNRF3Q9ULT6 AC117454.1-201ENST00000491120 168 ntBASIC3.13□□□□□ -1.91
ZNRF3Q9ULT6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.13□□□□□ -1.91
ZNRF3Q9ULT6 RNU7-115P-201ENST00000516433 55 ntBASIC3.13□□□□□ -1.91
ZNRF3Q9ULT6 MIR4724-201ENST00000579485 89 ntBASIC3.13□□□□□ -1.91
ZNRF3Q9ULT6 MIR3133-201ENST00000583157 78 ntBASIC3.13□□□□□ -1.91
ZNRF3Q9ULT6 MIR4635-201ENST00000583759 79 ntBASIC3.13□□□□□ -1.91
ZNRF3Q9ULT6 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.13□□□□□ -1.91
ZNRF3Q9ULT6 AC104465.1-201ENST00000611365 139 ntBASIC3.13□□□□□ -1.91
ZNRF3Q9ULT6 AC021753.1-201ENST00000635724 168 ntBASIC3.13□□□□□ -1.91
ZNRF3Q9ULT6 CENPCP1-201ENST00000533085 2578 ntBASIC3.13□□□□□ -1.91
ZNRF3Q9ULT6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.13□□□□□ -1.91
ZNRF3Q9ULT6 AC008264.2-201ENST00000610193 3731 ntBASIC3.12□□□□□ -1.91
ZNRF3Q9ULT6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZNRF3Q9ULT6 Y_RNA.8-201ENST00000362353 102 ntBASIC3.12□□□□□ -1.91
ZNRF3Q9ULT6 RNU4-13P-201ENST00000364019 141 ntBASIC3.12□□□□□ -1.91
ZNRF3Q9ULT6 U8.7-201ENST00000364940 136 ntBASIC3.12□□□□□ -1.91
ZNRF3Q9ULT6 RN7SKP223-201ENST00000410582 62 ntBASIC3.12□□□□□ -1.91
ZNRF3Q9ULT6 RNU2-48P-201ENST00000410694 191 ntBASIC3.12□□□□□ -1.91
ZNRF3Q9ULT6 CR769767.1-201ENST00000436337 346 ntBASIC3.12□□□□□ -1.91
ZNRF3Q9ULT6 snoU13.23-201ENST00000458863 104 ntBASIC3.12□□□□□ -1.91
ZNRF3Q9ULT6 RPL36AP21-201ENST00000490372 323 ntBASIC3.12□□□□□ -1.91
ZNRF3Q9ULT6 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.12□□□□□ -1.91
ZNRF3Q9ULT6 RNU7-116P-201ENST00000516940 62 ntBASIC3.12□□□□□ -1.91
ZNRF3Q9ULT6 RNU6-856P-201ENST00000516959 98 ntBASIC3.12□□□□□ -1.91
ZNRF3Q9ULT6 AC005972.2-201ENST00000604690 348 ntBASIC3.12□□□□□ -1.91
ZNRF3Q9ULT6 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.12□□□□□ -1.91
ZNRF3Q9ULT6 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.11□□□□□ -1.91
ZNRF3Q9ULT6 Y_RNA.24-201ENST00000362508 103 ntBASIC3.11□□□□□ -1.91
ZNRF3Q9ULT6 Y_RNA.75-201ENST00000362927 97 ntBASIC3.11□□□□□ -1.91
ZNRF3Q9ULT6 RNU6-312P-201ENST00000364629 107 ntBASIC3.11□□□□□ -1.91
ZNRF3Q9ULT6 SNORA25B-201ENST00000365507 128 ntBASIC3.11□□□□□ -1.91
ZNRF3Q9ULT6 RNU6-969P-201ENST00000383900 105 ntBASIC3.11□□□□□ -1.91
ZNRF3Q9ULT6 Y_RNA.412-201ENST00000384001 104 ntBASIC3.11□□□□□ -1.91
ZNRF3Q9ULT6 AL451074.5-201ENST00000415894 435 ntBASIC3.11□□□□□ -1.91
ZNRF3Q9ULT6 RN7SL636P-201ENST00000497504 294 ntBASIC3.11□□□□□ -1.91
ZNRF3Q9ULT6 MIR5688-201ENST00000580619 83 ntBASIC3.11□□□□□ -1.91
ZNRF3Q9ULT6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.11□□□□□ -1.91
ZNRF3Q9ULT6 MIR4438-201ENST00000585271 93 ntBASIC3.11□□□□□ -1.91
ZNRF3Q9ULT6 POLR3GP1-201ENST00000594073 261 ntBASIC3.11□□□□□ -1.91
ZNRF3Q9ULT6 AP003357.1-201ENST00000604497 148 ntBASIC3.11□□□□□ -1.91
ZNRF3Q9ULT6 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.11□□□□□ -1.91
ZNRF3Q9ULT6 AC108206.1-201ENST00000570186 4159 ntBASIC3.11□□□□□ -1.91
ZNRF3Q9ULT6 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 Y_RNA.23-201ENST00000362496 106 ntBASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 SNORD114-30-201ENST00000364448 72 ntBASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 Y_RNA.357-201ENST00000365487 109 ntBASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 RNU6-1323P-201ENST00000384025 107 ntBASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 RNU6-804P-201ENST00000384286 107 ntBASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 SNORA36B-201ENST00000410438 131 ntBASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 SRIP3-201ENST00000413200 219 ntBASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 TRIAP1P1-201ENST00000427062 225 ntBASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 AC009238.1-201ENST00000442165 424 ntBASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 Z96811.1-201ENST00000445880 108 ntBASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 AC009237.6-201ENST00000446969 424 ntBASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 AP004217.1-201ENST00000480579 346 ntBASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 RNU6-1146P-201ENST00000516282 102 ntBASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 SNORA9.3-201ENST00000516383 129 ntBASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 RNU6-63P-201ENST00000516690 95 ntBASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 MIR3144-201ENST00000579460 79 ntBASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 MIR4744-201ENST00000581563 82 ntBASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 AC090616.3-201ENST00000582184 217 ntBASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 AC108706.1-201ENST00000611053 297 ntBASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ZNRF3Q9ULT6 Y_RNA.170-201ENST00000363746 110 ntBASIC3.09□□□□□ -1.91
ZNRF3Q9ULT6 Y_RNA.441-201ENST00000384123 112 ntBASIC3.09□□□□□ -1.91
ZNRF3Q9ULT6 Y_RNA.506-201ENST00000384494 102 ntBASIC3.09□□□□□ -1.91
ZNRF3Q9ULT6 AC244505.4-201ENST00000434905 287 ntBASIC3.09□□□□□ -1.91
ZNRF3Q9ULT6 HMGN2P34-201ENST00000437647 269 ntBASIC3.09□□□□□ -1.91
ZNRF3Q9ULT6 SSXP5-201ENST00000443473 287 ntBASIC3.09□□□□□ -1.91
ZNRF3Q9ULT6 AL392103.1-201ENST00000447000 198 ntBASIC3.09□□□□□ -1.91
ZNRF3Q9ULT6 RPL23AP54-201ENST00000495129 419 ntBASIC3.09□□□□□ -1.91
ZNRF3Q9ULT6 RNU6-1007P-201ENST00000516586 107 ntBASIC3.09□□□□□ -1.91
ZNRF3Q9ULT6 RNU6-789P-201ENST00000517105 102 ntBASIC3.09□□□□□ -1.91
ZNRF3Q9ULT6 AC127455.1-201ENST00000565496 145 ntBASIC3.09□□□□□ -1.91
ZNRF3Q9ULT6 U4atac.1-201ENST00000618345 95 ntBASIC3.09□□□□□ -1.91
ZNRF3Q9ULT6 AC068700.1-201ENST00000565862 3754 ntBASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 243.3 ms