Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 CBX3P8-201ENST00000532412 525 ntBASIC0.76□□□□□ -2.29
NUP50Q9UKX7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.75□□□□□ -2.29
NUP50Q9UKX7 MIRLET7C-201ENST00000362160 84 ntBASIC0.75□□□□□ -2.29
NUP50Q9UKX7 MIR373-201ENST00000362273 69 ntBASIC0.75□□□□□ -2.29
NUP50Q9UKX7 Y_RNA.354-201ENST00000365448 111 ntBASIC0.75□□□□□ -2.29
NUP50Q9UKX7 RNU6-842P-201ENST00000384269 107 ntBASIC0.75□□□□□ -2.29
NUP50Q9UKX7 RNU6-376P-201ENST00000384731 106 ntBASIC0.75□□□□□ -2.29
NUP50Q9UKX7 MIR562-201ENST00000384894 95 ntBASIC0.75□□□□□ -2.29
NUP50Q9UKX7 RNU11-5P-201ENST00000391216 129 ntBASIC0.75□□□□□ -2.29
NUP50Q9UKX7 RNU6-1001P-201ENST00000411265 100 ntBASIC0.75□□□□□ -2.29
NUP50Q9UKX7 ELOCP21-201ENST00000412558 336 ntBASIC0.75□□□□□ -2.29
NUP50Q9UKX7 AL606490.4-201ENST00000423117 127 ntBASIC0.75□□□□□ -2.29
NUP50Q9UKX7 USP9YP30-201ENST00000430729 455 ntBASIC0.75□□□□□ -2.29
NUP50Q9UKX7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.75□□□□□ -2.29
NUP50Q9UKX7 RNU6-314P-201ENST00000516574 104 ntBASIC0.75□□□□□ -2.29
NUP50Q9UKX7 RNU6-197P-201ENST00000516680 100 ntBASIC0.75□□□□□ -2.29
NUP50Q9UKX7 RNU6-1088P-201ENST00000516850 104 ntBASIC0.75□□□□□ -2.29
NUP50Q9UKX7 AP002004.2-201ENST00000531656 154 ntBASIC0.75□□□□□ -2.29
NUP50Q9UKX7 SNORA27.1-201ENST00000362604 124 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 SNORD114-2-201ENST00000363953 78 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 Y_RNA.194-201ENST00000363985 102 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 RNU4-75P-201ENST00000364621 146 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.74□□□□□ -2.29
NUP50Q9UKX7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
NUP50Q9UKX7 RNU6-1264P-201ENST00000383891 107 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 MIR200A-201ENST00000384875 90 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 MIR329-1-201ENST00000385028 80 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 RNA5SP482-201ENST00000391269 118 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 RNU6-373P-201ENST00000411247 98 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 MTND3P21-201ENST00000433774 331 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 MTND1P17-201ENST00000448961 204 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 PSMC1P5-201ENST00000512850 177 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 RNU6-1314P-201ENST00000517139 104 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 AC090142.3-201ENST00000519012 385 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.74□□□□□ -2.29
NUP50Q9UKX7 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.74□□□□□ -2.29
NUP50Q9UKX7 AC024909.2-201ENST00000553035 286 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 AC090617.3-201ENST00000573670 475 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.74□□□□□ -2.29
NUP50Q9UKX7 MIR3973-201ENST00000579824 107 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 AC125232.2-201ENST00000592457 143 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 AC068790.6-201ENST00000602558 258 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 AC100812.1-201ENST00000607622 580 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 AL357075.2-201ENST00000614906 189 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 MTND5P16-201ENST00000460269 1703 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 AC073544.1-201ENST00000600110 1595 ntBASIC0.74□□□□□ -2.29
NUP50Q9UKX7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
NUP50Q9UKX7 Y_RNA.112-201ENST00000363250 102 ntBASIC0.73□□□□□ -2.29
NUP50Q9UKX7 Y_RNA.466-201ENST00000384294 113 ntBASIC0.73□□□□□ -2.29
NUP50Q9UKX7 RNU6-831P-201ENST00000384548 107 ntBASIC0.73□□□□□ -2.29
NUP50Q9UKX7 SNORA75.2-201ENST00000391138 150 ntBASIC0.73□□□□□ -2.29
NUP50Q9UKX7 SNORA75.3-201ENST00000391231 150 ntBASIC0.73□□□□□ -2.29
NUP50Q9UKX7 MIR942-201ENST00000401111 86 ntBASIC0.73□□□□□ -2.29
NUP50Q9UKX7 MTCYBP4-201ENST00000401524 249 ntBASIC0.73□□□□□ -2.29
NUP50Q9UKX7 AC006461.1-201ENST00000412637 326 ntBASIC0.73□□□□□ -2.29
NUP50Q9UKX7 UQCRBP2-201ENST00000447827 297 ntBASIC0.73□□□□□ -2.29
NUP50Q9UKX7 RNU7-21P-201ENST00000459430 62 ntBASIC0.73□□□□□ -2.29
NUP50Q9UKX7 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.73□□□□□ -2.29
NUP50Q9UKX7 RNU6-1116P-201ENST00000517269 99 ntBASIC0.73□□□□□ -2.29
NUP50Q9UKX7 AC245505.1-201ENST00000556398 224 ntBASIC0.73□□□□□ -2.29
NUP50Q9UKX7 CYP3A137P-201ENST00000562436 69 ntBASIC0.73□□□□□ -2.29
NUP50Q9UKX7 MIR5000-201ENST00000577717 103 ntBASIC0.73□□□□□ -2.29
NUP50Q9UKX7 PRELID3BP2-201ENST00000605362 201 ntBASIC0.73□□□□□ -2.29
NUP50Q9UKX7 AL096861.1-201ENST00000610899 123 ntBASIC0.73□□□□□ -2.29
NUP50Q9UKX7 AC106800.4-201ENST00000614905 153 ntBASIC0.73□□□□□ -2.29
NUP50Q9UKX7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
NUP50Q9UKX7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
NUP50Q9UKX7 Y_RNA.402-201ENST00000383972 102 ntBASIC0.72□□□□□ -2.29
NUP50Q9UKX7 Y_RNA.517-201ENST00000384551 106 ntBASIC0.72□□□□□ -2.29
NUP50Q9UKX7 MIR608-201ENST00000384820 100 ntBASIC0.72□□□□□ -2.29
NUP50Q9UKX7 MIR526A1-201ENST00000384897 85 ntBASIC0.72□□□□□ -2.29
NUP50Q9UKX7 MIR100-201ENST00000385259 80 ntBASIC0.72□□□□□ -2.29
NUP50Q9UKX7 RNU2-64P-201ENST00000411315 191 ntBASIC0.72□□□□□ -2.29
NUP50Q9UKX7 RPS3AP1-201ENST00000413190 320 ntBASIC0.72□□□□□ -2.29
NUP50Q9UKX7 EIF1P2-201ENST00000428233 350 ntBASIC0.72□□□□□ -2.29
NUP50Q9UKX7 Z98949.2-201ENST00000440996 144 ntBASIC0.72□□□□□ -2.29
NUP50Q9UKX7 AL137792.2-201ENST00000443484 235 ntBASIC0.72□□□□□ -2.29
NUP50Q9UKX7 LINC01399-202ENST00000458450 244 ntBASIC0.72□□□□□ -2.29
NUP50Q9UKX7 snoU13.25-201ENST00000458945 104 ntBASIC0.72□□□□□ -2.29
NUP50Q9UKX7 AL049830.1-201ENST00000468034 425 ntBASIC0.72□□□□□ -2.29
NUP50Q9UKX7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.72□□□□□ -2.29
NUP50Q9UKX7 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.72□□□□□ -2.29
NUP50Q9UKX7 MIR3684-201ENST00000579779 74 ntBASIC0.72□□□□□ -2.29
NUP50Q9UKX7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.72□□□□□ -2.29
NUP50Q9UKX7 AC004832.4-201ENST00000608952 331 ntBASIC0.72□□□□□ -2.29
NUP50Q9UKX7 MIR6128-201ENST00000615528 109 ntBASIC0.72□□□□□ -2.29
NUP50Q9UKX7 AC048344.4-201ENST00000619744 527 ntBASIC0.72□□□□□ -2.29
NUP50Q9UKX7 AC068700.1-201ENST00000565862 3754 ntBASIC0.72□□□□□ -2.29
NUP50Q9UKX7 HSBP1P2-201ENST00000299671 229 ntBASIC0.71□□□□□ -2.3
NUP50Q9UKX7 RNU4-41P-201ENST00000364426 143 ntBASIC0.71□□□□□ -2.3
NUP50Q9UKX7 MIR598-201ENST00000384868 97 ntBASIC0.71□□□□□ -2.3
NUP50Q9UKX7 MIR181A1-201ENST00000385026 110 ntBASIC0.71□□□□□ -2.3
NUP50Q9UKX7 MIR605-201ENST00000385078 83 ntBASIC0.71□□□□□ -2.3
NUP50Q9UKX7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.71□□□□□ -2.3
NUP50Q9UKX7 RNU5A-5P-201ENST00000411054 116 ntBASIC0.71□□□□□ -2.3
NUP50Q9UKX7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.71□□□□□ -2.3
NUP50Q9UKX7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.71□□□□□ -2.3
NUP50Q9UKX7 AC233266.1-201ENST00000454518 96 ntBASIC0.71□□□□□ -2.3
NUP50Q9UKX7 SNORD5.1-201ENST00000458800 75 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms