Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC132825.7-201ENST00000638744 335 ntBASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 ZNF299P-201ENST00000406845 1804 ntBASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 SNORA1B-201ENST00000362535 133 ntBASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 SNORA27.3-201ENST00000364937 134 ntBASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 RNU5E-6P-201ENST00000365574 115 ntBASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 RNU6-1179P-201ENST00000384667 107 ntBASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 MIR15B-201ENST00000385045 98 ntBASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 RNU6-583P-201ENST00000516012 92 ntBASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 RNU6-58P-201ENST00000517143 103 ntBASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 AC022306.2-201ENST00000617563 647 ntBASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 AC105081.1-201ENST00000617727 106 ntBASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 AC073869.9-201ENST00000641610 120 ntBASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 RNU6-960P-201ENST00000364056 120 ntBASIC-1.25□□□□□ -2.61
SCN11AQ9UI33 RNU6-744P-201ENST00000365557 107 ntBASIC-1.25□□□□□ -2.61
SCN11AQ9UI33 RNU6-1316P-201ENST00000384242 108 ntBASIC-1.25□□□□□ -2.61
SCN11AQ9UI33 RNU6-1122P-201ENST00000384449 107 ntBASIC-1.25□□□□□ -2.61
SCN11AQ9UI33 AC098592.1-201ENST00000419352 333 ntBASIC-1.25□□□□□ -2.61
SCN11AQ9UI33 PIGPP3-201ENST00000425307 415 ntBASIC-1.25□□□□□ -2.61
SCN11AQ9UI33 AC015818.7-201ENST00000428754 109 ntBASIC-1.25□□□□□ -2.61
SCN11AQ9UI33 AC087499.7-201ENST00000441958 109 ntBASIC-1.25□□□□□ -2.61
SCN11AQ9UI33 MTCYBP42-201ENST00000444653 1130 ntBASIC-1.25□□□□□ -2.61
SCN11AQ9UI33 snoU13.16-201ENST00000459350 104 ntBASIC-1.25□□□□□ -2.61
SCN11AQ9UI33 SNRPGP7-201ENST00000469016 106 ntBASIC-1.25□□□□□ -2.61
SCN11AQ9UI33 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-1.25□□□□□ -2.61
SCN11AQ9UI33 AC116353.2-201ENST00000505332 712 ntBASIC-1.25□□□□□ -2.61
SCN11AQ9UI33 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-1.25□□□□□ -2.61
SCN11AQ9UI33 AC093303.1-201ENST00000514549 295 ntBASIC-1.25□□□□□ -2.61
SCN11AQ9UI33 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.25□□□□□ -2.61
SCN11AQ9UI33 RNU6-430P-201ENST00000517078 107 ntBASIC-1.25□□□□□ -2.61
SCN11AQ9UI33 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.25□□□□□ -2.61
SCN11AQ9UI33 OR4H6P-202ENST00000603819 340 ntBASIC-1.25□□□□□ -2.61
SCN11AQ9UI33 AC018462.2-201ENST00000605375 395 ntBASIC-1.25□□□□□ -2.61
SCN11AQ9UI33 RNU6-552P-201ENST00000362869 119 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 RNY4P6-201ENST00000363667 96 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 RNU6-726P-201ENST00000364680 107 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 RNU6-796P-201ENST00000391086 107 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 SNORA31.14-201ENST00000516728 116 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 RNU6-1116P-201ENST00000517269 99 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 AC023442.1-201ENST00000531247 422 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 MIR4438-201ENST00000585271 93 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 AC008521.1-201ENST00000587471 187 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 AC144521.1-201ENST00000607148 956 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 AC010975.3-201ENST00000618727 978 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 AC006435.5-201ENST00000624486 112 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 SNORD114-25-201ENST00000363742 72 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 MTCO3P40-201ENST00000392516 676 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 RNU2-42P-201ENST00000410697 113 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 MTND4P24-201ENST00000424002 397 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 TRIM60P10Y-201ENST00000425589 751 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 RNU7-140P-201ENST00000459546 60 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 MIR4324-201ENST00000584846 72 ntBASIC-1.26□□□□□ -2.61
SCN11AQ9UI33 RNU6-353P-201ENST00000364266 108 ntBASIC-1.27□□□□□ -2.61
SCN11AQ9UI33 RNU6-946P-201ENST00000383878 107 ntBASIC-1.27□□□□□ -2.61
SCN11AQ9UI33 RNU6-205P-201ENST00000390858 107 ntBASIC-1.27□□□□□ -2.61
SCN11AQ9UI33 RPS29P13-201ENST00000402041 169 ntBASIC-1.27□□□□□ -2.61
SCN11AQ9UI33 AL358934.1-201ENST00000432346 324 ntBASIC-1.27□□□□□ -2.61
SCN11AQ9UI33 SNORD65B-201ENST00000459126 73 ntBASIC-1.27□□□□□ -2.61
SCN11AQ9UI33 AC105029.1-201ENST00000520250 669 ntBASIC-1.27□□□□□ -2.61
SCN11AQ9UI33 SLC2A13P1-201ENST00000531560 322 ntBASIC-1.27□□□□□ -2.61
SCN11AQ9UI33 AC115989.2-201ENST00000578640 563 ntBASIC-1.27□□□□□ -2.61
SCN11AQ9UI33 MIR4752-201ENST00000579672 72 ntBASIC-1.27□□□□□ -2.61
SCN11AQ9UI33 AC120024.3-201ENST00000603167 156 ntBASIC-1.27□□□□□ -2.61
SCN11AQ9UI33 AC099654.8-201ENST00000637757 681 ntBASIC-1.27□□□□□ -2.61
SCN11AQ9UI33 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.28□□□□□ -2.61
SCN11AQ9UI33 MIR516B2-201ENST00000385190 85 ntBASIC-1.28□□□□□ -2.61
SCN11AQ9UI33 MTCO1P17-201ENST00000411522 491 ntBASIC-1.28□□□□□ -2.61
SCN11AQ9UI33 SNORD123-201ENST00000459473 70 ntBASIC-1.28□□□□□ -2.61
SCN11AQ9UI33 RPL23AP75-201ENST00000491601 451 ntBASIC-1.28□□□□□ -2.61
SCN11AQ9UI33 RNU6-706P-201ENST00000517229 104 ntBASIC-1.28□□□□□ -2.61
SCN11AQ9UI33 MIR5692A1-201ENST00000580523 69 ntBASIC-1.28□□□□□ -2.61
SCN11AQ9UI33 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.29□□□□□ -2.62
SCN11AQ9UI33 MIR516B1-201ENST00000385211 90 ntBASIC-1.29□□□□□ -2.62
SCN11AQ9UI33 RNU6-1093P-201ENST00000391194 107 ntBASIC-1.29□□□□□ -2.62
SCN11AQ9UI33 MIR208B-201ENST00000401172 77 ntBASIC-1.29□□□□□ -2.62
SCN11AQ9UI33 RPL23AP30-201ENST00000432419 501 ntBASIC-1.29□□□□□ -2.62
SCN11AQ9UI33 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-1.29□□□□□ -2.62
SCN11AQ9UI33 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.29□□□□□ -2.62
SCN11AQ9UI33 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.29□□□□□ -2.62
SCN11AQ9UI33 MIR4762-201ENST00000585261 75 ntBASIC-1.29□□□□□ -2.62
SCN11AQ9UI33 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.29□□□□□ -2.62
SCN11AQ9UI33 SUMO1P3-201ENST00000439961 304 ntBASIC-1.29□□□□□ -2.62
SCN11AQ9UI33 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.29□□□□□ -2.62
SCN11AQ9UI33 AC011352.1-201ENST00000512300 793 ntBASIC-1.29□□□□□ -2.62
SCN11AQ9UI33 AGGF1P4-201ENST00000568249 801 ntBASIC-1.29□□□□□ -2.62
SCN11AQ9UI33 AC022960.3-201ENST00000619794 441 ntBASIC-1.29□□□□□ -2.62
SCN11AQ9UI33 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.3□□□□□ -2.62
SCN11AQ9UI33 SNORA22B-201ENST00000383876 138 ntBASIC-1.3□□□□□ -2.62
SCN11AQ9UI33 SNORA75.4-201ENST00000391278 119 ntBASIC-1.3□□□□□ -2.62
SCN11AQ9UI33 AC092447.3-201ENST00000426027 686 ntBASIC-1.3□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms