Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.88□□□□□ -2.27
CTSFQ9UBX1 MIR3973-201ENST00000579824 107 ntBASIC0.88□□□□□ -2.27
CTSFQ9UBX1 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.88□□□□□ -2.27
CTSFQ9UBX1 7SK.7-201ENST00000603504 247 ntBASIC0.88□□□□□ -2.27
CTSFQ9UBX1 AC084782.3-201ENST00000612282 578 ntBASIC0.88□□□□□ -2.27
CTSFQ9UBX1 MIR6079-201ENST00000635807 62 ntBASIC0.88□□□□□ -2.27
CTSFQ9UBX1 AC005592.1-201ENST00000566527 1640 ntBASIC0.87□□□□□ -2.27
CTSFQ9UBX1 RNU1-36P-201ENST00000365130 165 ntBASIC0.87□□□□□ -2.27
CTSFQ9UBX1 RNU6-318P-201ENST00000384283 103 ntBASIC0.87□□□□□ -2.27
CTSFQ9UBX1 RNY1P14-201ENST00000384426 108 ntBASIC0.87□□□□□ -2.27
CTSFQ9UBX1 Y_RNA.508-201ENST00000384502 114 ntBASIC0.87□□□□□ -2.27
CTSFQ9UBX1 RNU6-950P-201ENST00000384651 107 ntBASIC0.87□□□□□ -2.27
CTSFQ9UBX1 MIR660-201ENST00000385235 97 ntBASIC0.87□□□□□ -2.27
CTSFQ9UBX1 MIR518E-201ENST00000385252 88 ntBASIC0.87□□□□□ -2.27
CTSFQ9UBX1 SNORD41-201ENST00000386967 70 ntBASIC0.87□□□□□ -2.27
CTSFQ9UBX1 U8.16-201ENST00000391279 133 ntBASIC0.87□□□□□ -2.27
CTSFQ9UBX1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.87□□□□□ -2.27
CTSFQ9UBX1 RNU6-917P-201ENST00000516294 104 ntBASIC0.87□□□□□ -2.27
CTSFQ9UBX1 RNA5SP168-201ENST00000516642 112 ntBASIC0.87□□□□□ -2.27
CTSFQ9UBX1 RNU6-1016P-201ENST00000516689 94 ntBASIC0.87□□□□□ -2.27
CTSFQ9UBX1 AC091178.2-201ENST00000584401 117 ntBASIC0.87□□□□□ -2.27
CTSFQ9UBX1 AC080078.2-201ENST00000603766 501 ntBASIC0.87□□□□□ -2.27
CTSFQ9UBX1 AL078603.1-201ENST00000603824 313 ntBASIC0.87□□□□□ -2.27
CTSFQ9UBX1 AC211469.2-201ENST00000605461 205 ntBASIC0.87□□□□□ -2.27
CTSFQ9UBX1 AC093913.1-201ENST00000614178 329 ntBASIC0.87□□□□□ -2.27
CTSFQ9UBX1 AC002553.4-201ENST00000616896 331 ntBASIC0.87□□□□□ -2.27
CTSFQ9UBX1 AC073349.3-201ENST00000617616 186 ntBASIC0.87□□□□□ -2.27
CTSFQ9UBX1 AL513423.1-201ENST00000621695 132 ntBASIC0.87□□□□□ -2.27
CTSFQ9UBX1 Y_RNA.2-201ENST00000362330 96 ntBASIC0.86□□□□□ -2.27
CTSFQ9UBX1 Y_RNA.122-201ENST00000363331 96 ntBASIC0.86□□□□□ -2.27
CTSFQ9UBX1 Y_RNA.124-201ENST00000363339 93 ntBASIC0.86□□□□□ -2.27
CTSFQ9UBX1 Y_RNA.355-201ENST00000365462 98 ntBASIC0.86□□□□□ -2.27
CTSFQ9UBX1 Y_RNA.364-201ENST00000365532 101 ntBASIC0.86□□□□□ -2.27
CTSFQ9UBX1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.86□□□□□ -2.27
CTSFQ9UBX1 AL034345.1-201ENST00000407768 123 ntBASIC0.86□□□□□ -2.27
CTSFQ9UBX1 MIR1277-201ENST00000408536 78 ntBASIC0.86□□□□□ -2.27
CTSFQ9UBX1 AC018865.2-201ENST00000423631 129 ntBASIC0.86□□□□□ -2.27
CTSFQ9UBX1 MTND3P10-201ENST00000450967 341 ntBASIC0.86□□□□□ -2.27
CTSFQ9UBX1 AC093850.1-201ENST00000454121 251 ntBASIC0.86□□□□□ -2.27
CTSFQ9UBX1 RNU7-87P-201ENST00000459343 62 ntBASIC0.86□□□□□ -2.27
CTSFQ9UBX1 OR9P1P-201ENST00000496431 281 ntBASIC0.86□□□□□ -2.27
CTSFQ9UBX1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.86□□□□□ -2.27
CTSFQ9UBX1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.86□□□□□ -2.27
CTSFQ9UBX1 Y_RNA.655-201ENST00000515919 96 ntBASIC0.86□□□□□ -2.27
CTSFQ9UBX1 RNU6-120P-201ENST00000516077 103 ntBASIC0.86□□□□□ -2.27
CTSFQ9UBX1 SCARNA16.2-201ENST00000516520 172 ntBASIC0.86□□□□□ -2.27
CTSFQ9UBX1 RNU7-172P-201ENST00000517125 64 ntBASIC0.86□□□□□ -2.27
CTSFQ9UBX1 AC011604.1-201ENST00000545978 196 ntBASIC0.86□□□□□ -2.27
CTSFQ9UBX1 AC090617.3-201ENST00000573670 475 ntBASIC0.86□□□□□ -2.27
CTSFQ9UBX1 MIR4698-201ENST00000577795 80 ntBASIC0.86□□□□□ -2.27
CTSFQ9UBX1 SNORA4-201ENST00000584302 138 ntBASIC0.86□□□□□ -2.27
CTSFQ9UBX1 AC009229.3-201ENST00000608056 282 ntBASIC0.86□□□□□ -2.27
CTSFQ9UBX1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.86□□□□□ -2.27
CTSFQ9UBX1 AC073869.6-201ENST00000640656 341 ntBASIC0.86□□□□□ -2.27
CTSFQ9UBX1 SNORA1B-201ENST00000362535 133 ntBASIC0.85□□□□□ -2.27
CTSFQ9UBX1 SNORA27.1-201ENST00000362604 124 ntBASIC0.85□□□□□ -2.27
CTSFQ9UBX1 RNY1P16-201ENST00000363063 111 ntBASIC0.85□□□□□ -2.27
CTSFQ9UBX1 Y_RNA.363-201ENST00000365529 113 ntBASIC0.85□□□□□ -2.27
CTSFQ9UBX1 RNU6-1264P-201ENST00000383891 107 ntBASIC0.85□□□□□ -2.27
CTSFQ9UBX1 RNU6-424P-201ENST00000384367 105 ntBASIC0.85□□□□□ -2.27
CTSFQ9UBX1 RNU4-14P-201ENST00000410858 122 ntBASIC0.85□□□□□ -2.27
CTSFQ9UBX1 MTND3P8-201ENST00000412909 339 ntBASIC0.85□□□□□ -2.27
CTSFQ9UBX1 AL139396.1-201ENST00000421137 167 ntBASIC0.85□□□□□ -2.27
CTSFQ9UBX1 RAB28P5-201ENST00000427490 651 ntBASIC0.85□□□□□ -2.27
CTSFQ9UBX1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.85□□□□□ -2.27
CTSFQ9UBX1 UQCRBP2-201ENST00000447827 297 ntBASIC0.85□□□□□ -2.27
CTSFQ9UBX1 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.85□□□□□ -2.27
CTSFQ9UBX1 AC048334.1-201ENST00000477975 159 ntBASIC0.85□□□□□ -2.27
CTSFQ9UBX1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.85□□□□□ -2.27
CTSFQ9UBX1 RN7SKP49-201ENST00000516675 260 ntBASIC0.85□□□□□ -2.27
CTSFQ9UBX1 RNU6-1213P-201ENST00000517075 94 ntBASIC0.85□□□□□ -2.27
CTSFQ9UBX1 SNORA70.22-201ENST00000517160 124 ntBASIC0.85□□□□□ -2.27
CTSFQ9UBX1 AF235103.2-201ENST00000525753 346 ntBASIC0.85□□□□□ -2.27
CTSFQ9UBX1 AL121579.1-201ENST00000555129 305 ntBASIC0.85□□□□□ -2.27
CTSFQ9UBX1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.85□□□□□ -2.27
CTSFQ9UBX1 AC006435.5-201ENST00000624486 112 ntBASIC0.85□□□□□ -2.27
CTSFQ9UBX1 U6.115-201ENST00000636045 103 ntBASIC0.85□□□□□ -2.27
CTSFQ9UBX1 AC068137.4-201ENST00000638485 296 ntBASIC0.85□□□□□ -2.27
CTSFQ9UBX1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
CTSFQ9UBX1 AC073544.1-201ENST00000600110 1595 ntBASIC0.84□□□□□ -2.27
CTSFQ9UBX1 MIRLET7C-201ENST00000362160 84 ntBASIC0.84□□□□□ -2.27
CTSFQ9UBX1 Y_RNA.88-201ENST00000363029 99 ntBASIC0.84□□□□□ -2.27
CTSFQ9UBX1 RNU6-407P-201ENST00000365280 104 ntBASIC0.84□□□□□ -2.27
CTSFQ9UBX1 Y_RNA.358-201ENST00000365491 99 ntBASIC0.84□□□□□ -2.27
CTSFQ9UBX1 MIR653-201ENST00000385279 96 ntBASIC0.84□□□□□ -2.27
CTSFQ9UBX1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.84□□□□□ -2.27
CTSFQ9UBX1 MIR548J-201ENST00000408833 112 ntBASIC0.84□□□□□ -2.27
CTSFQ9UBX1 AC074085.1-201ENST00000413598 418 ntBASIC0.84□□□□□ -2.27
CTSFQ9UBX1 MTCO3P19-201ENST00000415864 321 ntBASIC0.84□□□□□ -2.27
CTSFQ9UBX1 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.84□□□□□ -2.27
CTSFQ9UBX1 RNA5SP20-201ENST00000515976 84 ntBASIC0.84□□□□□ -2.27
CTSFQ9UBX1 RNU6-1291P-201ENST00000516591 104 ntBASIC0.84□□□□□ -2.27
CTSFQ9UBX1 AC018448.1-201ENST00000552843 316 ntBASIC0.84□□□□□ -2.27
CTSFQ9UBX1 AL020996.3-201ENST00000606617 222 ntBASIC0.84□□□□□ -2.27
CTSFQ9UBX1 MIR6857-201ENST00000613267 93 ntBASIC0.84□□□□□ -2.27
CTSFQ9UBX1 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.83□□□□□ -2.28
CTSFQ9UBX1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CTSFQ9UBX1 Y_RNA.118-201ENST00000363300 101 ntBASIC0.83□□□□□ -2.28
CTSFQ9UBX1 RNU5F-3P-201ENST00000363767 117 ntBASIC0.83□□□□□ -2.28
CTSFQ9UBX1 RNU6-879P-201ENST00000364328 108 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms