Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 HSPE1P21-201ENST00000438283 308 ntBASIC1.58□□□□□ -2.16
NLGN3Q9NZ94 SNORD65B-201ENST00000459126 73 ntBASIC1.58□□□□□ -2.16
NLGN3Q9NZ94 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.58□□□□□ -2.16
NLGN3Q9NZ94 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.58□□□□□ -2.16
NLGN3Q9NZ94 AC005840.1-201ENST00000498412 377 ntBASIC1.58□□□□□ -2.16
NLGN3Q9NZ94 RNU6-475P-201ENST00000516073 104 ntBASIC1.58□□□□□ -2.16
NLGN3Q9NZ94 AC023442.1-201ENST00000531247 422 ntBASIC1.58□□□□□ -2.16
NLGN3Q9NZ94 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.58□□□□□ -2.16
NLGN3Q9NZ94 AL021879.1-201ENST00000611756 288 ntBASIC1.58□□□□□ -2.16
NLGN3Q9NZ94 PART1_1.1-201ENST00000611761 217 ntBASIC1.58□□□□□ -2.16
NLGN3Q9NZ94 U6.108-201ENST00000637764 58 ntBASIC1.58□□□□□ -2.16
NLGN3Q9NZ94 AC005592.1-201ENST00000566527 1640 ntBASIC1.58□□□□□ -2.16
NLGN3Q9NZ94 Y_RNA.101-201ENST00000363154 102 ntBASIC1.57□□□□□ -2.16
NLGN3Q9NZ94 RNU6-112P-201ENST00000363599 104 ntBASIC1.57□□□□□ -2.16
NLGN3Q9NZ94 RNU4-76P-201ENST00000364509 141 ntBASIC1.57□□□□□ -2.16
NLGN3Q9NZ94 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.57□□□□□ -2.16
NLGN3Q9NZ94 Y_RNA.458-201ENST00000384240 102 ntBASIC1.57□□□□□ -2.16
NLGN3Q9NZ94 RNU6-296P-201ENST00000384608 107 ntBASIC1.57□□□□□ -2.16
NLGN3Q9NZ94 RNA5SP467-201ENST00000391274 118 ntBASIC1.57□□□□□ -2.16
NLGN3Q9NZ94 RNU6-130P-201ENST00000411112 103 ntBASIC1.57□□□□□ -2.16
NLGN3Q9NZ94 CST2P1-201ENST00000425770 87 ntBASIC1.57□□□□□ -2.16
NLGN3Q9NZ94 AC008834.1-201ENST00000511612 175 ntBASIC1.57□□□□□ -2.16
NLGN3Q9NZ94 RNU7-128P-201ENST00000517247 62 ntBASIC1.57□□□□□ -2.16
NLGN3Q9NZ94 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.57□□□□□ -2.16
NLGN3Q9NZ94 AC027419.1-201ENST00000522976 328 ntBASIC1.57□□□□□ -2.16
NLGN3Q9NZ94 AC040926.1-201ENST00000530195 238 ntBASIC1.57□□□□□ -2.16
NLGN3Q9NZ94 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.57□□□□□ -2.16
NLGN3Q9NZ94 AC044792.1-201ENST00000593294 196 ntBASIC1.57□□□□□ -2.16
NLGN3Q9NZ94 AC104695.3-201ENST00000604052 296 ntBASIC1.57□□□□□ -2.16
NLGN3Q9NZ94 AC005828.6-201ENST00000606610 232 ntBASIC1.57□□□□□ -2.16
NLGN3Q9NZ94 AC004467.1-201ENST00000615678 330 ntBASIC1.57□□□□□ -2.16
NLGN3Q9NZ94 AL138825.1-201ENST00000618587 192 ntBASIC1.57□□□□□ -2.16
NLGN3Q9NZ94 RNU6-450P-201ENST00000364654 107 ntBASIC1.56□□□□□ -2.16
NLGN3Q9NZ94 RNU6-60P-201ENST00000364792 103 ntBASIC1.56□□□□□ -2.16
NLGN3Q9NZ94 RNU6-20P-201ENST00000384106 107 ntBASIC1.56□□□□□ -2.16
NLGN3Q9NZ94 SNORA20B-201ENST00000384220 132 ntBASIC1.56□□□□□ -2.16
NLGN3Q9NZ94 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.56□□□□□ -2.16
NLGN3Q9NZ94 RPEP5-201ENST00000441137 268 ntBASIC1.56□□□□□ -2.16
NLGN3Q9NZ94 SNORA25.10-201ENST00000515926 124 ntBASIC1.56□□□□□ -2.16
NLGN3Q9NZ94 RNU2-12P-201ENST00000517216 168 ntBASIC1.56□□□□□ -2.16
NLGN3Q9NZ94 RNA5SP437-201ENST00000517249 129 ntBASIC1.56□□□□□ -2.16
NLGN3Q9NZ94 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.56□□□□□ -2.16
NLGN3Q9NZ94 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.56□□□□□ -2.16
NLGN3Q9NZ94 AC022432.1-201ENST00000595739 310 ntBASIC1.56□□□□□ -2.16
NLGN3Q9NZ94 AC069114.2-201ENST00000604699 304 ntBASIC1.56□□□□□ -2.16
NLGN3Q9NZ94 BX248123.2-201ENST00000606318 124 ntBASIC1.56□□□□□ -2.16
NLGN3Q9NZ94 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.56□□□□□ -2.16
NLGN3Q9NZ94 AC010205.1-201ENST00000616668 449 ntBASIC1.56□□□□□ -2.16
NLGN3Q9NZ94 U6.115-201ENST00000636045 103 ntBASIC1.56□□□□□ -2.16
NLGN3Q9NZ94 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 RNU6-626P-201ENST00000363354 107 ntBASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 RNU1-42P-201ENST00000364033 160 ntBASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 RNU6-694P-201ENST00000364071 147 ntBASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 MIR517C-201ENST00000385103 95 ntBASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 SNORA67.6-201ENST00000391093 99 ntBASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 MIR1253-201ENST00000408273 105 ntBASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 RNU6-1199P-201ENST00000411249 104 ntBASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 RN7SKP101-201ENST00000411376 320 ntBASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 AC005002.2-201ENST00000438228 269 ntBASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 AC009474.2-201ENST00000451383 136 ntBASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 AC093852.1-201ENST00000503587 266 ntBASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 SNORA31.17-201ENST00000516953 127 ntBASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 AC023157.2-201ENST00000540596 141 ntBASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 AC084364.2-201ENST00000546924 395 ntBASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 MIR3198-2-201ENST00000577868 80 ntBASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 MIR4423-201ENST00000580922 80 ntBASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 MIR4285-201ENST00000581001 85 ntBASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 AL356055.1-201ENST00000602528 446 ntBASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 AL645939.4-201ENST00000604495 135 ntBASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 AC010900.2-201ENST00000604508 210 ntBASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
NLGN3Q9NZ94 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 RNU6-1266P-201ENST00000362794 105 ntBASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 Y_RNA.124-201ENST00000363339 93 ntBASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 SNORA63D-201ENST00000364359 132 ntBASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 Y_RNA.243-201ENST00000364481 109 ntBASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 Y_RNA.361-201ENST00000365515 120 ntBASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 SNORD14.1-201ENST00000365609 90 ntBASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 RNU6-1227P-201ENST00000383981 107 ntBASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 RNU6-997P-201ENST00000384725 107 ntBASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 MIR30A-201ENST00000385092 71 ntBASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 RNU6-823P-201ENST00000391042 103 ntBASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 MRPL42P3-201ENST00000401492 326 ntBASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 AL606517.2-201ENST00000442855 241 ntBASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 RNU6-1146P-201ENST00000516282 102 ntBASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 RNU6-988P-201ENST00000519081 107 ntBASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 AL390123.1-201ENST00000603216 237 ntBASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 AL121655.1-201ENST00000605811 308 ntBASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 U6.73-201ENST00000619194 103 ntBASIC1.54□□□□□ -2.16
NLGN3Q9NZ94 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms