Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RLIMQ9NVW2 SNORA33-201ENST00000363664 130 ntBASIC2.35□□□□□ -2.03
RLIMQ9NVW2 RNU6-899P-201ENST00000363947 107 ntBASIC2.35□□□□□ -2.03
RLIMQ9NVW2 RNU4-10P-201ENST00000364383 140 ntBASIC2.35□□□□□ -2.03
RLIMQ9NVW2 MIR597-201ENST00000384968 97 ntBASIC2.35□□□□□ -2.03
RLIMQ9NVW2 RNA5SP270-201ENST00000411361 118 ntBASIC2.35□□□□□ -2.03
RLIMQ9NVW2 AC104332.1-201ENST00000440471 797 ntBASIC2.35□□□□□ -2.03
RLIMQ9NVW2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.35□□□□□ -2.03
RLIMQ9NVW2 RN7SL636P-201ENST00000497504 294 ntBASIC2.35□□□□□ -2.03
RLIMQ9NVW2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.35□□□□□ -2.03
RLIMQ9NVW2 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.35□□□□□ -2.03
RLIMQ9NVW2 HMGB3P3-201ENST00000510526 400 ntBASIC2.35□□□□□ -2.03
RLIMQ9NVW2 SNORA81.3-201ENST00000517283 198 ntBASIC2.35□□□□□ -2.03
RLIMQ9NVW2 GTF3AP2-201ENST00000557014 266 ntBASIC2.35□□□□□ -2.03
RLIMQ9NVW2 MIR3169-201ENST00000578032 83 ntBASIC2.35□□□□□ -2.03
RLIMQ9NVW2 MIR5194-201ENST00000582634 120 ntBASIC2.35□□□□□ -2.03
RLIMQ9NVW2 MIR5092-201ENST00000583139 88 ntBASIC2.35□□□□□ -2.03
RLIMQ9NVW2 AC007229.1-201ENST00000590455 412 ntBASIC2.35□□□□□ -2.03
RLIMQ9NVW2 AC011921.3-201ENST00000605540 361 ntBASIC2.35□□□□□ -2.03
RLIMQ9NVW2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.35□□□□□ -2.03
RLIMQ9NVW2 AL078604.3-201ENST00000615580 211 ntBASIC2.35□□□□□ -2.03
RLIMQ9NVW2 AC006386.2-201ENST00000624491 75 ntBASIC2.35□□□□□ -2.03
RLIMQ9NVW2 AC012005.1-201ENST00000624575 75 ntBASIC2.35□□□□□ -2.03
RLIMQ9NVW2 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.35□□□□□ -2.03
RLIMQ9NVW2 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RLIMQ9NVW2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RLIMQ9NVW2 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RLIMQ9NVW2 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RLIMQ9NVW2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.34□□□□□ -2.03
RLIMQ9NVW2 RNU1-58P-201ENST00000362413 163 ntBASIC2.34□□□□□ -2.03
RLIMQ9NVW2 RNU6-1205P-201ENST00000363625 106 ntBASIC2.34□□□□□ -2.03
RLIMQ9NVW2 RNU1-96P-201ENST00000364163 162 ntBASIC2.34□□□□□ -2.03
RLIMQ9NVW2 Y_RNA.262-201ENST00000364641 102 ntBASIC2.34□□□□□ -2.03
RLIMQ9NVW2 U8.7-201ENST00000364940 136 ntBASIC2.34□□□□□ -2.03
RLIMQ9NVW2 RNU11-3P-201ENST00000391111 133 ntBASIC2.34□□□□□ -2.03
RLIMQ9NVW2 AL135786.1-201ENST00000415892 214 ntBASIC2.34□□□□□ -2.03
RLIMQ9NVW2 EBAG9P1-201ENST00000418955 543 ntBASIC2.34□□□□□ -2.03
RLIMQ9NVW2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.34□□□□□ -2.03
RLIMQ9NVW2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.34□□□□□ -2.03
RLIMQ9NVW2 RPS15AP28-201ENST00000435088 386 ntBASIC2.34□□□□□ -2.03
RLIMQ9NVW2 AC096725.1-201ENST00000514266 313 ntBASIC2.34□□□□□ -2.03
RLIMQ9NVW2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.34□□□□□ -2.03
RLIMQ9NVW2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.34□□□□□ -2.03
RLIMQ9NVW2 AC005972.2-201ENST00000604690 348 ntBASIC2.34□□□□□ -2.03
RLIMQ9NVW2 MIR548AY-201ENST00000617669 107 ntBASIC2.34□□□□□ -2.03
RLIMQ9NVW2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RLIMQ9NVW2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
RLIMQ9NVW2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RLIMQ9NVW2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RLIMQ9NVW2 Y_RNA.29-201ENST00000362570 113 ntBASIC2.33□□□□□ -2.04
RLIMQ9NVW2 RNU6-859P-201ENST00000362728 107 ntBASIC2.33□□□□□ -2.04
RLIMQ9NVW2 RNU6-117P-201ENST00000365415 107 ntBASIC2.33□□□□□ -2.04
RLIMQ9NVW2 SNORA8-201ENST00000384574 139 ntBASIC2.33□□□□□ -2.04
RLIMQ9NVW2 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.33□□□□□ -2.04
RLIMQ9NVW2 COTL1P1-201ENST00000422309 375 ntBASIC2.33□□□□□ -2.04
RLIMQ9NVW2 RPS12P2-201ENST00000439728 269 ntBASIC2.33□□□□□ -2.04
RLIMQ9NVW2 AL138752.1-201ENST00000452964 351 ntBASIC2.33□□□□□ -2.04
RLIMQ9NVW2 Y_RNA.644-201ENST00000459006 113 ntBASIC2.33□□□□□ -2.04
RLIMQ9NVW2 RPL23AP54-201ENST00000495129 419 ntBASIC2.33□□□□□ -2.04
RLIMQ9NVW2 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.33□□□□□ -2.04
RLIMQ9NVW2 Y_RNA.674-201ENST00000516362 113 ntBASIC2.33□□□□□ -2.04
RLIMQ9NVW2 EIF4BP1-201ENST00000554881 351 ntBASIC2.33□□□□□ -2.04
RLIMQ9NVW2 AC015720.1-201ENST00000565251 277 ntBASIC2.33□□□□□ -2.04
RLIMQ9NVW2 POLR3GP1-201ENST00000594073 261 ntBASIC2.33□□□□□ -2.04
RLIMQ9NVW2 AL359075.3-201ENST00000613288 217 ntBASIC2.33□□□□□ -2.04
RLIMQ9NVW2 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RLIMQ9NVW2 AL365361.1-201ENST00000566942 3481 ntBASIC2.33□□□□□ -2.04
RLIMQ9NVW2 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RLIMQ9NVW2 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
RLIMQ9NVW2 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RLIMQ9NVW2 RNU6-1020P-201ENST00000363684 107 ntBASIC2.32□□□□□ -2.04
RLIMQ9NVW2 Y_RNA.304-201ENST00000365011 112 ntBASIC2.32□□□□□ -2.04
RLIMQ9NVW2 PIGPP3-201ENST00000425307 415 ntBASIC2.32□□□□□ -2.04
RLIMQ9NVW2 COX6CP14-201ENST00000469580 174 ntBASIC2.32□□□□□ -2.04
RLIMQ9NVW2 RNU7-115P-201ENST00000516433 55 ntBASIC2.32□□□□□ -2.04
RLIMQ9NVW2 RNU1-142P-201ENST00000516682 145 ntBASIC2.32□□□□□ -2.04
RLIMQ9NVW2 RNA5SP137-201ENST00000516833 135 ntBASIC2.32□□□□□ -2.04
RLIMQ9NVW2 RNU6-182P-201ENST00000516970 105 ntBASIC2.32□□□□□ -2.04
RLIMQ9NVW2 AL353149.1-201ENST00000610667 244 ntBASIC2.32□□□□□ -2.04
RLIMQ9NVW2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RLIMQ9NVW2 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
RLIMQ9NVW2 AC068700.1-201ENST00000565862 3754 ntBASIC2.31□□□□□ -2.04
RLIMQ9NVW2 SNORA80A-201ENST00000363922 136 ntBASIC2.31□□□□□ -2.04
RLIMQ9NVW2 RNU6-47P-201ENST00000383866 107 ntBASIC2.31□□□□□ -2.04
RLIMQ9NVW2 Y_RNA.621-201ENST00000411065 96 ntBASIC2.31□□□□□ -2.04
RLIMQ9NVW2 AL162725.1-201ENST00000435405 301 ntBASIC2.31□□□□□ -2.04
RLIMQ9NVW2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.31□□□□□ -2.04
RLIMQ9NVW2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.31□□□□□ -2.04
RLIMQ9NVW2 RNA5SP402-201ENST00000517148 110 ntBASIC2.31□□□□□ -2.04
RLIMQ9NVW2 AP002392.1-201ENST00000537692 208 ntBASIC2.31□□□□□ -2.04
RLIMQ9NVW2 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.31□□□□□ -2.04
RLIMQ9NVW2 LARP7P3-201ENST00000579888 337 ntBASIC2.31□□□□□ -2.04
RLIMQ9NVW2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.31□□□□□ -2.04
RLIMQ9NVW2 Z83818.1-201ENST00000603584 150 ntBASIC2.31□□□□□ -2.04
RLIMQ9NVW2 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.31□□□□□ -2.04
RLIMQ9NVW2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.31□□□□□ -2.04
RLIMQ9NVW2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
RLIMQ9NVW2 AC007336.1-201ENST00000576365 3828 ntBASIC2.3□□□□□ -2.04
RLIMQ9NVW2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RLIMQ9NVW2 SNORA3A-201ENST00000364113 130 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms