Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 AC055872.1-201ENST00000570978 278 ntBASIC1.23□□□□□ -2.21
EXOSC3Q9NQT5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.23□□□□□ -2.21
EXOSC3Q9NQT5 AL021879.1-201ENST00000611756 288 ntBASIC1.23□□□□□ -2.21
EXOSC3Q9NQT5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.23□□□□□ -2.21
EXOSC3Q9NQT5 AC006435.5-201ENST00000624486 112 ntBASIC1.23□□□□□ -2.21
EXOSC3Q9NQT5 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
EXOSC3Q9NQT5 MIR410-201ENST00000362222 80 ntBASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 RNA5SP259-201ENST00000365541 109 ntBASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 RNU6-1040P-201ENST00000383974 107 ntBASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 RNU6-950P-201ENST00000384651 107 ntBASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 MIR513A1-201ENST00000385138 129 ntBASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 SNORA12.1-201ENST00000390873 148 ntBASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 RN7SKP200-201ENST00000410564 320 ntBASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 MTCO3P19-201ENST00000415864 321 ntBASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 AC079140.2-201ENST00000506193 142 ntBASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 FGF7P4-201ENST00000509595 295 ntBASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 SUMO2P16-201ENST00000519475 264 ntBASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 MIR3937-201ENST00000580135 106 ntBASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 AL390123.1-201ENST00000603216 237 ntBASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 AL512598.1-201ENST00000610158 273 ntBASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 Y_RNA.804-201ENST00000615262 101 ntBASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 AC011476.5-201ENST00000615594 130 ntBASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 AC004467.1-201ENST00000615678 330 ntBASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 U2.1-201ENST00000618978 145 ntBASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 AC138305.3-201ENST00000624988 240 ntBASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 MIR6079-201ENST00000635807 62 ntBASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 AC018630.2-201ENST00000534866 2403 ntBASIC1.22□□□□□ -2.21
EXOSC3Q9NQT5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 Y_RNA.70-201ENST00000362886 110 ntBASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 Y_RNA.263-201ENST00000364659 114 ntBASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 MIR628-201ENST00000385229 95 ntBASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 SNORA17.3-201ENST00000391159 129 ntBASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 MTCO2P27-201ENST00000420740 428 ntBASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 RPS27P16-201ENST00000425758 201 ntBASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 AL135790.2-201ENST00000437701 267 ntBASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 AC099799.1-201ENST00000439809 192 ntBASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 STAG3L5P-204ENST00000443759 179 ntBASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 RNU1-123P-201ENST00000458950 160 ntBASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 SNORD19B-201ENST00000459623 84 ntBASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 AC091021.1-201ENST00000468051 388 ntBASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 AL117351.2-201ENST00000513571 157 ntBASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 RNA5SP445-201ENST00000515889 115 ntBASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 AL160236.1-201ENST00000556317 195 ntBASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 AC068338.1-201ENST00000565567 176 ntBASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 AL365434.2-201ENST00000607979 234 ntBASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 AC040896.1-201ENST00000613819 479 ntBASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
EXOSC3Q9NQT5 Y_RNA.267-201ENST00000364679 109 ntBASIC1.2□□□□□ -2.22
EXOSC3Q9NQT5 RNU6-1310P-201ENST00000384153 107 ntBASIC1.2□□□□□ -2.22
EXOSC3Q9NQT5 Y_RNA.463-201ENST00000384271 102 ntBASIC1.2□□□□□ -2.22
EXOSC3Q9NQT5 RNU6-136P-201ENST00000384663 107 ntBASIC1.2□□□□□ -2.22
EXOSC3Q9NQT5 RNU6-376P-201ENST00000384731 106 ntBASIC1.2□□□□□ -2.22
EXOSC3Q9NQT5 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.2□□□□□ -2.22
EXOSC3Q9NQT5 AC027119.1-201ENST00000440877 241 ntBASIC1.2□□□□□ -2.22
EXOSC3Q9NQT5 AL137792.2-201ENST00000443484 235 ntBASIC1.2□□□□□ -2.22
EXOSC3Q9NQT5 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.2□□□□□ -2.22
EXOSC3Q9NQT5 RNU6-63P-201ENST00000516690 95 ntBASIC1.2□□□□□ -2.22
EXOSC3Q9NQT5 RPL21P9-201ENST00000556149 474 ntBASIC1.2□□□□□ -2.22
EXOSC3Q9NQT5 MIR3684-201ENST00000579779 74 ntBASIC1.2□□□□□ -2.22
EXOSC3Q9NQT5 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
EXOSC3Q9NQT5 AL353997.5-201ENST00000618886 171 ntBASIC1.2□□□□□ -2.22
EXOSC3Q9NQT5 AC104985.2-201ENST00000620598 500 ntBASIC1.2□□□□□ -2.22
EXOSC3Q9NQT5 Y_RNA.101-201ENST00000363154 102 ntBASIC1.19□□□□□ -2.22
EXOSC3Q9NQT5 Y_RNA.187-201ENST00000363918 113 ntBASIC1.19□□□□□ -2.22
EXOSC3Q9NQT5 RNY3P4-201ENST00000384428 101 ntBASIC1.19□□□□□ -2.22
EXOSC3Q9NQT5 MIR873-201ENST00000401120 77 ntBASIC1.19□□□□□ -2.22
EXOSC3Q9NQT5 AL034345.1-201ENST00000407768 123 ntBASIC1.19□□□□□ -2.22
EXOSC3Q9NQT5 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.19□□□□□ -2.22
EXOSC3Q9NQT5 FCF1P4-201ENST00000448326 183 ntBASIC1.19□□□□□ -2.22
EXOSC3Q9NQT5 AC245517.4-201ENST00000448601 281 ntBASIC1.19□□□□□ -2.22
EXOSC3Q9NQT5 RNU7-152P-201ENST00000458982 64 ntBASIC1.19□□□□□ -2.22
EXOSC3Q9NQT5 RNU7-94P-201ENST00000459576 63 ntBASIC1.19□□□□□ -2.22
EXOSC3Q9NQT5 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.19□□□□□ -2.22
EXOSC3Q9NQT5 Y_RNA.661-201ENST00000516003 99 ntBASIC1.19□□□□□ -2.22
EXOSC3Q9NQT5 RNU1-92P-201ENST00000517017 135 ntBASIC1.19□□□□□ -2.22
EXOSC3Q9NQT5 RNU6-902P-201ENST00000517212 91 ntBASIC1.19□□□□□ -2.22
EXOSC3Q9NQT5 AC006600.1-201ENST00000572529 153 ntBASIC1.19□□□□□ -2.22
EXOSC3Q9NQT5 MIR4421-201ENST00000578133 69 ntBASIC1.19□□□□□ -2.22
EXOSC3Q9NQT5 MIR4659A-201ENST00000580269 81 ntBASIC1.19□□□□□ -2.22
EXOSC3Q9NQT5 MIR4298-201ENST00000584380 73 ntBASIC1.19□□□□□ -2.22
EXOSC3Q9NQT5 AC005828.6-201ENST00000606610 232 ntBASIC1.19□□□□□ -2.22
EXOSC3Q9NQT5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
EXOSC3Q9NQT5 RNU6-1123P-201ENST00000362347 106 ntBASIC1.18□□□□□ -2.22
EXOSC3Q9NQT5 Y_RNA.243-201ENST00000364481 109 ntBASIC1.18□□□□□ -2.22
EXOSC3Q9NQT5 Y_RNA.428-201ENST00000384078 102 ntBASIC1.18□□□□□ -2.22
EXOSC3Q9NQT5 SNORD78.2-201ENST00000391076 69 ntBASIC1.18□□□□□ -2.22
EXOSC3Q9NQT5 SNORA40.6-201ENST00000391153 128 ntBASIC1.18□□□□□ -2.22
EXOSC3Q9NQT5 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.18□□□□□ -2.22
EXOSC3Q9NQT5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.18□□□□□ -2.22
EXOSC3Q9NQT5 PGBD4P5-201ENST00000445958 426 ntBASIC1.18□□□□□ -2.22
EXOSC3Q9NQT5 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.18□□□□□ -2.22
EXOSC3Q9NQT5 RPS29P29-201ENST00000456396 171 ntBASIC1.18□□□□□ -2.22
EXOSC3Q9NQT5 AC004223.1-201ENST00000479840 271 ntBASIC1.18□□□□□ -2.22
EXOSC3Q9NQT5 RNU6-1291P-201ENST00000516591 104 ntBASIC1.18□□□□□ -2.22
EXOSC3Q9NQT5 SNORD116.3-201ENST00000517176 78 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms